Charadrius vociferus (killdeer): 104285774
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Entry
104285774 CDS
T08577
Name
(RefSeq) pumilio domain-containing protein KIAA0020 homolog isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104285774
03009 Ribosome biogenesis [BR:
cvf03009
]
104285774
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104285774
Ribosome biogenesis [BR:
cvf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104285774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF
WRM1_C
RXT2_N
Arm-DNA-bind_2
FliB_C
Motif
Other DBs
NCBI-GeneID:
104285774
NCBI-ProteinID:
XP_009882578
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
METKGKKKFVGKSGKAPRGKVPHGKRKFKKGNDSGPPKKPLNKGDEEGKPKSISKKFVKG
QLRPGRASVKQFKNKQQSEKLAKKRKLQDGEDGGSDSKKPKWNDFKKKRKELKQTRQLND
KSNYDIIVKSKQIWETVRRKKCDKEKREKLMNELQKLLHGKIKSLAFAHDSTRVIQCFIQ
YGNEKQRQETFEELKDSLVELSKSKYSRNIVKKFLMYGTKPQIAEIIKSFKGHVKKMLRH
AEASAIVEYAYNDKAILEQRNMLTEELYGNTFQVYKTPVVPTLDKVLEAQPEKREAILDE
MKQILTPMAQKEAVIKHSLVHKVFLDFFIYALPKQRSEMIEAIREAVIYLAHTHDGARVA
MHCLWHGTPKDRKVIVKTMKTYIEKIATGEFSHLVLLAAFDCIDDTKLVKQLIISEINAS
LPNIINNKYGKKVLLYLLSPRDPAHFVPEIITLLQQGDGNAYSKKNTELRRRELLEAISS
PLLEYLQEHTQEVVVDKATFVLVADILRTALGDIQPALDAIANLAAEELVPGGRDGQLHI
AEHPAGHLVLKWLIEQDEKMRESGKEVCFGRTLVERVGIENMKTWAEVNRGAIILCCLLR
STDQKVANTVKKGLKKLVPKLKLNKNVKGIEALLEKLTS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaagggtaaaaagaagttcgtggggaagagtggaaaagcacctcgtggaaaa
gtgccacatgggaaaaggaaatttaaaaaaggtaacgattcaggtccaccaaagaaacct
cttaacaaaggagatgaggagggaaagcctaaatccatttccaagaaatttgtgaaagga
cagttaagacctggaagagctagtgtcaaacaattcaagaataaacagcaatcagaaaag
cttgcaaagaaaaggaagctccaggatggtgaagacggagggtcagattctaagaagccg
aagtggaatgacttcaaaaagaaaaggaaggagttaaagcaaaccagacaacttaatgat
aaaagtaattatgacataattgtaaaatcaaagcaaatatgggaaactgtcagaaggaag
aaatgcgataaggagaagcgagaaaagctaatgaatgaattacagaagcttcttcatgga
aaaattaaaagtctggcgtttgcacatgattcaactcgagtgatccagtgctttattcag
tatggtaatgagaagcaaaggcaggagacatttgaagaattgaaagatagcctagtagag
ttgagcaagtcaaaatattccagaaacattgtgaagaagtttcttatgtatgggacaaaa
ccacaaattgcagaaataataaaaagtttcaaaggccatgtgaaaaaaatgctccgtcat
gctgaagcatctgccatagtggaatatgcatataatgacaaagccattctggagcagagg
aatatgctgacagaagaactatatgggaacaccttccaggtttacaagacaccagttgtc
ccaacattggataaagtgttagaagctcagcctgaaaagagagaggccatcttggatgaa
atgaaacagattcttacaccaatggcacaaaaagaggctgtgataaagcactcactggta
cataaagtatttttggactttttcatttatgctcttcctaaacaaagatccgaaatgata
gaagctatcagagaggctgtcatctacctggcacacactcatgatggagcccgagtagcg
atgcactgcttatggcacggtactcccaaggacagaaaagtaattgtgaaaactatgaag
acatatattgaaaaaatagcaacgggtgaattttctcatctggtcttgctggcagcattt
gattgcatcgatgacactaaacttgtaaaacagttaattatatctgaaataaatgcttct
ttgcccaatataataaacaacaaatatggaaagaaggtcttgctgtacttgctaagtcct
agagaccctgcacattttgttccagaaatcatcacacttctgcaacagggagatggaaat
gcctatagtaagaagaatactgaactccgccgccgtgaacttctggaagccatttcctca
cctttgctagaatatttgcaagaacatacccaagaagtagtggtagacaaagctaccttt
gtcttggttgctgatatcttaagaacagctcttggtgacatccagcctgcactagatgca
attgctaatttagcagcagaagagctggtgccaggtggccgtgatgggcagcttcacatt
gcagagcatccagcaggccatctagttttgaaatggttaatagagcaagatgaaaaaatg
agagagagtggaaaagaagtttgctttggaagaacactggtggaacgtgttggtattgag
aatatgaagacctgggcagaagtgaatcgaggtgccattattctttgttgccttctgcgg
agcaccgatcaaaaagtggcaaatacagtcaaaaaaggactgaaaaagcttgtcccaaag
ttgaagctgaataaaaatgtaaaaggaatagaagcattactggagaaattgacttcctaa
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