KEGG   Charadrius vociferus (killdeer): 104285785
Entry
104285785         CDS       T08577                                 
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03022  Basal transcription factors
cvf03420  Nucleotide excision repair
cvf04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104285785 (CDK7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104285785 (CDK7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104285785 (CDK7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:cvf01001]
    104285785 (CDK7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvf03021]
    104285785 (CDK7)
   03019 Messenger RNA biogenesis [BR:cvf03019]
    104285785 (CDK7)
   03400 DNA repair and recombination proteins [BR:cvf03400]
    104285785 (CDK7)
Enzymes [BR:cvf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     104285785 (CDK7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     104285785 (CDK7)
Protein kinases [BR:cvf01001]
 Serine/threonine kinases: CMGC group
  CDK family
   104285785 (CDK7)
Transcription machinery [BR:cvf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     104285785 (CDK7)
Messenger RNA biogenesis [BR:cvf03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     104285785 (CDK7)
DNA repair and recombination proteins [BR:cvf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     104285785 (CDK7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Seadorna_VP7 Kinase-like ABC1 RIO1 APH Pkinase_fungal Haspin_kinase
Other DBs
NCBI-GeneID: 104285785
NCBI-ProteinID: XP_009882590
LinkDB
Position
Unknown
AA seq 327 aa
MILRFATVYKARDKNVNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLI
DAFGHKSNISLVFDFMETDLEVIIKDTSIVLTQSHIKAYMLMTLQGLEYLHQHWILHRDL
KPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPELLFGARMYGVGVDMWA
VGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEDQWPGMTSLPDYVTFKSFPGMPLQ
HIFSAAGDDLLSLLQGLFTFNPCARVTATQALKQKYFSNRPGPTPGNQLPRPNCPAEAVK
EQQNALLNLKRKRTEGIDQGLPKKLIF
NT seq 984 nt   +upstreamnt  +downstreamnt
atgattttacggtttgctacagtctataaagcaagagataagaacgtcaaccagatcgtg
gctattaaaaagattaaactgggacatagatcagaagctaaagatggaattaacagaaca
gccctcagggagataaaattgttgcaggaattaagccatccgaatattattggtcttata
gacgcatttggacacaagtccaatatcagtttagtgtttgattttatggaaacagatctt
gaggttattataaaggatacgagtattgtgttgacacaatctcacatcaaggcatatatg
ttgatgactcttcaaggattagagtatttacatcagcactggattttacatagggatctt
aaaccaaataacttgctcttagatgaaaatggggttttaaaattggctgactttggcttg
gcaaaatcttttggaagcccaaatagagtttatacgcaccaggtagtaacaaggtggtac
cgagccccagaactattgtttggtgctagaatgtatggtgttggagtggatatgtgggct
gttggttgtattttagctgaattgctcctcagggttccttttttgcctggagactctgat
cttgaccagctgacaaggatatttgaaacactgggcactccaacagaagaccagtggcct
gggatgacaagtcttccagattatgtcacatttaagtctttccctggaatgccacttcaa
catatcttcagtgcagctggtgatgatttattgagtcttctgcaaggcttattcactttt
aatccttgtgctagggttacagccactcaggcattgaaacagaagtatttcagtaaccga
ccaggacctactccaggaaatcagctgccaagacccaactgtcctgcagaagctgtaaag
gagcaacaaaatgcacttttaaatttaaaaaggaagagaacggaaggaatagatcaagga
ttaccaaaaaaattgattttttga

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