Charadrius vociferus (killdeer): 104285888
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Entry
104285888 CDS
T08577
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104285888 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104285888 (DHX36)
03012 Translation factors [BR:
cvf03012
]
104285888 (DHX36)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104285888 (DHX36)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104285888 (DHX36)
Translation factors [BR:
cvf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104285888 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Sir1
Motif
Other DBs
NCBI-GeneID:
104285888
NCBI-ProteinID:
XP_009882697
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDERREEQIVQLLNTVQTKNEKEQEAMSWWSGDEEGPTPEQPAKVKPDTEKAPVKQRPVL
EKTFLDRDVEYLFEKNEQDTDLDEQLKEDLRKKKSDPRYIEMQRFREKLPSYGMRQELVN
LINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSMCRIVCTQPRRISAISVAERVAA
ERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHE
RNLQSDVLMSIIKDLLNIRLDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLL
EDVIEKLRYTPENTDRRPRWKKGFMQGHVSRPEKEEKEEIYRERWPDYLRQLRGRYSAST
IDALEMMDDEKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR
FIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFD
TQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE
LCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPV
EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLT
VVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFVNSRDPKD
PKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEE
TEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQS
PARIAHLVKNLRQELDDLLQEKIENPHPVDWNDTKSRDTAVLTAIIDLITTQENESARNY
APRFQSERYS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgcagggaagagcaaattgtgcagctgttgaatactgtccaaactaaaaat
gaaaaggagcaagaagccatgtcttggtggtctggggatgaagaaggacctactccagaa
cagcctgcaaaagtgaaaccagatactgaaaaagctcctgtaaaacagagaccagtcttg
gaaaaaacatttcttgatcgggatgtggaatatctctttgaaaaaaatgagcaagatact
gatttagatgagcagcttaaagaagacttaagaaagaagaaatctgatcctagatatatt
gaaatgcagagattccgagagaaactcccttcatatgggatgagacaggaacttgtaaac
cttataaacaataatcgagtaactgtgataagtggtgaaactggttgtggaaagacaaca
caagttacacagttcatcttggatgattacatagagcgagggaaagggtctatgtgcagg
attgtttgtactcagcctaggaggatcagtgctatttcggtggctgagagagtggctgct
gaaagggcggaagcatgtggtaacggcaagagtacaggataccaaattcgtctacagagt
cggttaccaaggaaacaaggttcaattttgtactgtaccacaggaattgtcctacagtgg
ctccagtcagataagcacttgtccagcattagtcatgtagtccttgatgaaattcatgaa
agaaatcttcagtcagatgtcttaatgagcattattaaagatcttctgaatattcgtttg
gatctgaaagtaatactcatgagtgctactttaaatgcagagaagttttcggagtatttt
gataattgtccaatgattcacatacctgggttcactttccctgtagtggaatatcttctc
gaggatgtaattgagaagttgaggtatactccagaaaacacagaccgtcggccaaggtgg
aagaaaggtttcatgcaaggacatgtaagcagaccagaaaaagaagaaaaagaggaaatc
tacagggagcgatggccagactatttaaggcagctgcggggcaggtattcagcaagtact
atagatgccttggaaatgatggatgatgaaaaggtcgaccttgaccttatagcagcactt
atcagacacatcgttttggaagaagaggacggtgcaattctagtgtttcttccaggctgg
gacaacattagcactttgcacgatctcttgatgtcacaagtcatgtttaagtcagatagg
tttattatcatacctttacattcattgatgcctactgttaaccagactcaggtttttaag
aagaccccgccaggagtaaggaaaatcgtgattgctaccaacattgcagagactagcatt
acaatagatgatgtggtgttcgttatagatggtggaaaaataaaggaaactcactttgac
acacagaacaacattagcacaatggcagcagagtgggttagtaaagctaatgccaagcag
aggaaaggtcgagcaggaagagttcagccaggccactgttatcatctatacaatggacta
cgcgctagccttctagatgattatcagttaccagagatcttgaggacacctttggaagaa
ctctgtttacagatcaagattctaaagcttggtggaatcgcttattttctgagcaaacta
atggatcccccatctcgtgatgctgtaatgttggccataaatcatctaatggagctgaat
gctttggacagacaagaagaactgactcctctaggcgtccatttagcacgattaccagtt
gaaccacatattggaaaaatgatcctctttggagctttattctgctgcttggatccagta
cttacaattgcagctagcctcagcttcaaagaccctttcgtcattcctctgggcaaagag
aaagtagcagatgcaagaagaaaggagctgtcaaagaacactaaaagtgatcatctaact
gtggtgaatgctttcacgggctgggaagagactcggcgtcgtggtttccgaactgagaaa
gactattgctgggaatatttcctgtcttcaaatacactgcagatgctgcataacatgaaa
ggacagtttgctgagcatctccttgcagctggatttgtgaatagcagagaccccaaggat
cccaaatctaataccaactcagataatgagaagttgctcaaagcggtcatctgtgctggt
ttatatccaaaagttgcaaagatccgtccaagcttcagcaaaaagagaaaaatggtgaaa
gtttgcaccaagacagatggcacagttaatattcatcctaaatcagttaatgtggaagaa
acagagttccattataactggcttgtgtaccatttgaagatgagaactagcagtatttac
ttgtatgattgtacagaggtgtctccatactgtctcttgttcttcggaggagatatatcc
attcagaaggataaagatcaggataccatcgctgtggatgaatggatcgttttccagtct
ccggcaagaatagcgcacttagttaagaatttaagacaagagcttgatgatcttctacaa
gaaaaaatagaaaacccacatcccgtggactggaatgatactaaatccagggatacagca
gtactgacagctattatagacttaatcacaacacaggagaatgaaagtgccagaaactat
gctccacgattccagagtgaacgctatagttga
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