Charadrius vociferus (killdeer): 104285994
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Entry
104285994 CDS
T08577
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104285994 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104285994 (TPR)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104285994 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Imm70
Motif
Other DBs
NCBI-GeneID:
104285994
NCBI-ProteinID:
XP_009882829
LinkDB
All DBs
Position
Unknown
AA seq
2321 aa
AA seq
DB search
MPEKQQYFEVEKRLAQSQERLVNETQECQTLREELKKLHEQLKSLNEKNKELEAAQDRNA
AIQSHLSREKEELEAEKRDLVRTSERRSQEVEHLNEDVKRLNEKLTEANTEKVKLQLKLD
ELQTSDVSVKYREKRLEQEKELLQNQNTWLNTELKAKTDELLHTAREKGNEILELKCNLE
NKKEEVSRMEEQVNSLKQSNENLQKHVEDLLNKLKEAKEQQASMEERFHNELNAHIKLSN
LYKSAADDSEAKSNELTGAVEELHKLLKEAGEANKATQEHLAEVEESKAVMEKELREKIS
KLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQD
QLLLEKLENKRINKYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIQR
LQEDADKANKHASLLERENQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADIS
SSSEVISQHLVSYRNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISELQGQLEEAL
NELEKLRESRHHQLQLVESIVRQRDMFRILLAQTTGAIIPLQASGILPEEISLTSTPKRP
SLPQAMSTPAPVSMTESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVT
DLRSQNAKISTQLEFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQ
DLRGANEKLAVAEVRAENLKKEKDILKMSDVRLTQQRESLLVEQRGQNLLLTNLRTIQGI
LERSETETKQRLNNQIEKLEREISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETN
RHINTKELLKNAQKETVMLKQQLNNTEAQLASQSSQRAPGKGQPSTNEDVDDLVSRLRQA
DEQVNDLRERLKTSSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKESSEYQAQL
EKKLMESEKEKQELQEEKRKAVENMEQQLSELKKSLSTVQSEVQEALQRASTALNNEQQA
RRDCQEQAKMASEAQNKYERELMLHAADVEALQAIKEQVAKNAAVRQQLEEAAQKAESEL
LECKASWEERERMIKDEASKLASRCEDLEKQNRLLHEQLESLSDKMVTSMKETMPTAVNV
SLNEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNA
EREKVQVTAKTIAQHEELMKKTETMNVLIETNKMLREEKERLEQELQQIQAKVRKLEADI
LPLQESNAELSEKSGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEAN
TKRIQQMSEETGRLKAEIARTNASLTTSQNLVQSLKDEVTKIRTEKDNLQKELDAKVADI
QEKVKTITQVKKIGRRYKTQYEELKAQHDKMVAEASTQSLVEQQEEQVSVQEVQELKDTL
SQAEVKTKALETQVESLQKSVAEKETEVRNLQEQLTQLQSELARLHQDLQEKTTQEEQLR
QQITEKEEKTRKTLLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALK
SQYEGRICRLERELREQQERHHEQRDEPPESTNKVPEQQRQISLKSTPASGERGIASTSD
PPTANIKPTPVVSTPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQV
ETQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSH
PQIEPANQEPSPAIVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRPREEEEDNTVENS
DQISEETVDVPLPKKLRSIQRVGPEEEVTAEESTDGEVETQTYNQDSQDSIGEGVTQGEY
TPMEDSEETSQSIPIDLGPLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQE
DYEDEEEEDEDDDEDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMG
GGESNQRAADSQNSGEGSTSAAESTFPHENSREQQPSSASERQTPRPPQSPRRPPHPLPP
RLTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVP
HRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHE
EESGGRSVPTTPLQVAAPVTVFTESASADASEHASQSVPMVTTSTGNLSTTTEAGAGDDG
DEVFAEAESEGITSEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSNQPKPF
RRVRLQPPTLRTGVRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagaaacaacagtactttgaagtagaaaagcgtctggctcaaagtcaggagaga
cttgtaaatgagacacaagaatgtcaaactctccgtgaggagcttaaaaaacttcacgaa
cagttgaagtcactgaatgagaagaataaagaacttgaagctgctcaggatcgtaatgca
gccatccagagccatttaagtagagaaaaagaagaactggaagctgaaaagagagatttg
gttcgaacaagtgaaagacgatctcaggaagttgagcatttaaacgaggatgttaaacgc
ttaaatgaaaagcttaccgaagctaacacagaaaaggtgaaacttcagttaaagttggat
gaacttcaaacatcagatgtttctgtgaagtaccgtgagaaaaggttggagcaagaaaaa
gaactactacagaatcaaaacacatggctgaacactgagttgaaagccaaaacagatgaa
cttctacatactgcaagggagaaaggcaatgaaatcttggaacttaagtgtaatctggag
aacaagaaggaggaggtttccagaatggaggaacaggtaaacagcttaaaacagtcaaat
gaaaatcttcagaagcatgtggaagaccttttgaataaactgaaggaggcaaaagaacag
caagctagtatggaggaaagattccacaatgaactgaatgcccacataaaattatccaac
ttgtataagagtgctgctgatgactcagaggcaaagagcaatgaactgacaggagcagta
gaagagctgcacaagctcctgaaggaggcgggtgaagctaataaagcaactcaggagcat
ttggctgaggtggaagagtcaaaagctgtaatggaaaaagaactgagggagaagatcagt
aaactggaaaaggagctggagaatgctaatgatttactgtcggctacaaagcgtaaagga
gccatattgtctgaggaggaactggcagctatgtcacccactgctgcagcagtagctaaa
gtagtcaagcctggaatgaaattaactgagctgtacaatgcatatgtagaaactcaggat
cagttgcttttggaaaagctggagaataagagaatcaataaatacttggatgaaatagtg
caggaagtagaagccaaagcaccgatcttaaagcgtcagcgtgaagaatttgagcgttcc
cagaaagctgttgctagtctgtctgcaaagcttgaacaagctatgaaggaaatccagcga
ttgcaggaggatgctgataaagccaataagcatgcatctctacttgaaagagaaaaccag
agactggaaatacaagtaaaagacctttcacagcagattcgtgtgcttttaatggaactt
gaagaagctagaggcaatcatgtgattcgtgatgaagaagtgagctctgctgacatcagt
agctcttctgaagtgatatctcaacatctagtctcttacagaaatattgaagaacttcag
cagcagaatcagcgtctcttggtggctcttcgggagctgggagaggctagagagaaagag
gagcaagaaacaacgtcatctaaaatttctgagcttcagggtcagcttgaggaagctctc
aatgagctagaaaaactgcgtgaatcacgtcatcatcagttgcagcttgttgagtctata
gttcgtcagcgtgatatgttccgcatattgttagcacagaccacaggagctatcattcct
ttgcaagcttcaggtatattaccagaggagatttctcttacatctactccaaagcgccca
agtttacctcaggccatgtcaactcctgctccagtgtcaatgactgagtcagtggagact
gtggaggctaaggctgcactgaagcagttgcaggaagtttttgagaactacaaaaaagaa
aaggcagagaatgacaagttgctgaatgaacaaaatgaaaagcttcaggagcaggtcaca
gacttgaggtcacaaaacgcgaagatatccacacagctggagtttgcctccaaacgttat
gaaatgctgcaggataatgttgaaggctatcgtcgagaaataacatctctgcatgaaaga
acccagaaactcacagcaacaactcagaagcaagagcagataattaacactatgactcaa
gatctcaggggagctaatgaaaaactggcagtggcagaggtgagagcagaaaacttaaaa
aaagagaaggatatcttgaagatgtcagacgtgcgtttgactcagcaacgtgagtcttta
ctagttgaacaaagaggacagaatttgctgcttactaatttgcgaactattcagggaata
ctggagaggtctgagacagaaacaaaacaaagactcaataatcagatagaaaagcttgag
cgtgagatatctcagctgaagaagaaactagaaagtgaggtggaacaaagacattccctt
accaaaaatcaagaggttcatatcctggatcttaagaggcaacttgagactgagacaaac
cgtcacattaacacaaaggaacttttaaagaatgcccagaaagaaactgtgatgttgaaa
cagcagcttaacaatacggaggctcagctagcatctcagtcatcacagagggctccaggg
aaaggtcagcctagtacaaatgaagatgtggatgatcttgtaagtcgattaaggcaagct
gatgaacaagttaatgacctgagagaaagactcaagactagttctagtaatgtggaacaa
tacagggccatggttcttagtctagaggaatcccttaataaggaaaaacaagtaacagag
gaagttcgtgcaacagttgaagctcgtctgaaggagtcttcagagtatcaagcacagctg
gaaaagaagctgatggagtcagagaaagaaaagcaagaactgcaagaggagaagcgtaaa
gctgtggagaacatggaacaacagctatcggaactaaagaagagtctgtcaaccgtgcaa
tcagaagttcaggaagctcttcagagagccagcacagctctaaataatgaacaacaagcc
agacgtgattgccaggaacaagcaaagatggcttctgaagctcaaaataagtatgaaagg
gagttaatgctccatgctgccgatgttgaagcactacaggctattaaagaacaagttgcc
aagaatgcagcggtaaggcagcagctagaggaggctgctcagaaagctgaatctgaattg
ctggagtgcaaagcctcctgggaagagagagagagaatgatcaaggatgaagcttcaaaa
cttgcatctcgctgtgaagacttggaaaaacaaaatcgattattacatgaacagctggaa
agtctgagtgataagatggtgacctctatgaaagaaaccatgccaactgcagtgaatgtt
tctctcaatgaggaaggcaaatcccaggagcaaatcttagaaattcttagatttatacgt
cgagaaaaggagattgcagaaactagatttgaggtggcccaggtcgagagcttgcgttac
cgtcagagagtggagcacctggaaagggaactccaggaactgcaggacagtctcaatgct
gagagagagaaggtgcaggtaacagcaaaaaccattgcacagcatgaagaattaatgaaa
aaaactgaaaccatgaatgtactgatagaaaccaacaagatgctaagagaagagaaggag
aggctagaacaagagctacaacaaattcaagcaaaggtacgcaagcttgaggcagacatt
ctgcctctacaggagtctaatgctgaactgagtgagaaaagtggaatgttgcaagcagag
aaaaagctgttggaggaagatgttaaacgctggaaagcccggactcagcatttattgagt
caacagaaggacactgatcttgaagagtatcggaagctgctttcagagaaggaggcaaac
accaagcgtatacaacaaatgagtgaagaaacgggcaggcttaaagcagaaatagccaga
actaatgcgtccttgactacaagccagaatcttgttcagagcctgaaggatgaagtaact
aaaataagaacggaaaaggataatttgcagaaagaactagatgctaaagtggctgacata
caagaaaaagtgaaaactataacgcaggtcaagaaaattgggcgcagatacaagactcaa
tatgaggagctgaaagcacagcatgataagatggttgctgaagcgtcaactcagtcttta
gtagaacaacaagaagaacaagtttctgtccaggaagttcaagagctgaaagacaccctc
agtcaagctgaagtgaagacaaaggctttggaaactcaggttgaaagtttacaaaagagt
gtagcagaaaaggaaactgaagttagaaatcttcaggagcagctaacacagctacaatca
gaacttgctcgtttgcatcaagatctgcaagagaagactacacaggaagaacagctcagg
caacagatcactgagaaagaagagaaaactaggaagaccttgcttgcagccaagcagaaa
attgcacagttagctggtacaaaggaacagctaacaaaagaaaatgaagagtggaagcaa
aagagcagttcattagaagagcagaagactgaattggaggtgcggatgagcgcactcaaa
tcacagtatgaaggtcgaatatgccgtctggaaagagagcttagagagcagcaagagcga
caccacgaacagcgagacgagccaccggagtctacaaataaggtcccagaacagcagagg
caaatctcactcaagtctactccagcttcaggtgaaagaggaattgctagcacttcagat
ccaccaacagcaaatatcaaaccaactcctgttgtgtcaactccaagtaaggtgactgct
gctgcaatagctgggaataagtctactccaagagccagtatccgtccaatggttactcct
gctacagtcactaatcctaccactactccaacagcaacagttatgcctacaacgcaggtg
gagactcaggaagctatgcaatcagaaggacctgtggagcatgttccagtctttggaagc
actagtgggtctgtgcgttccaccagtcccaatgttcagacgtctctctctcagcccatc
ttgactgttcagcagcagacgcaagcgactgcttttgtgcagcccactcagcaaagtcat
cctcagattgagcccgctaatcaagagccatcccctgccattgtagaagttgtacagagc
tctcaaatagagaggccctccacttctacagcagtgtttggcacagtttcagctacccca
agttcttcactgtctaaacgtccacgagaggaagaggaggataacactgtggaaaactca
gaccaaatttcagaggaaacagtggatgtacctcttccaaagaaactgagaagcatacag
agagttggacctgaggaggaagtaacagcagaagagagcactgatggtgaggtagaaact
caaacatacaatcaagactcacaagactcaattggagaaggtgtcacacagggagagtac
actcccatggaggatagtgaagaaacttcccagtctatcccaatagatcttggacctctt
cagtcagatcaacaaaatacttcttcatctcaggatggccagtccaagagagatgatgtc
attgtaattgatagtgatgatgaagatgatgatgatgaagaaaatgaaggcgagcaggaa
gattatgaggatgaggaagaggaagatgaggatgatgatgaagacacagggatgggagat
gaaggtgatgacagtaatgaaggaactggtagtgctgatggtaacgatggatatgaagct
gatgatgctgagggtgctgatggtacagatcctggaacagaaactgaggaaagcatggga
ggaggtgaaagcaaccagagggcagcagattctcaaaacagtggagaagggagtacaagt
gctgcggagtccacttttcctcatgaaaattcaagagagcagcagccatcgtctgcctcg
gagagacagacccctcgacccccacagtcaccacgcagaccaccacatccactgccccca
cgactaactattcatgctcctcctcaagaactgggtcccccagtacagagaatccagatg
actcgaagacagtcggtggggcgtggacttcaactgactcctggtataggtgggatgcag
caacacttctttgatgatgaggacagaacagttccaagcacaccaactcttgtagttcca
catcgtacagatgggtttgcagaagccattcattccccccaggtagctggagttcctaga
ttcagatttggaccccctgaagatatgccacaaactagttcaagtcactctgatcttggt
cagcttgcatcccaaggaggtttaggaatgtatgaaactccactatttcttgctcatgag
gaagaatcaggtggtcgtagtgttccaacaacaccattacaagtagcagcaccagtgaca
gtttttactgaaagtgcatcagctgacgcttcagagcatgcttctcagtcagttcccatg
gttacaacatctactggcaatctgtctaccactacagaggctggagctggtgatgatggg
gatgaagtttttgcagaggcagaatctgaaggaattacttcagaagcaggcctagagatt
gatagccagcaagaagaagaatctgttcaagcatctgatgagtcagatcttccttctact
agtcaagatcctccttctagttcatctgcagacacaagcagtaatcagcctaagccattt
cgacgtgtcagacttcagccaccgacactaagaactggtgttcgtggtcgtcagttcaac
agacaaaggggtgtaactcatgcaatgggaggcagaggaggcctgaacagaggaaatatt
agttaa
DBGET
integrated database retrieval system