KEGG   Charadrius vociferus (killdeer): 104285997
Entry
104285997         CDS       T08577                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03082  ATP-dependent chromatin remodeling
cvf03083  Polycomb repressive complex
cvf04110  Cell cycle
cvf04330  Notch signaling pathway
cvf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104285997 (HDAC1)
   03083 Polycomb repressive complex
    104285997 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    104285997 (HDAC1)
   04350 TGF-beta signaling pathway
    104285997 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104285997 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cvf03036]
    104285997 (HDAC1)
Enzymes [BR:cvf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104285997 (HDAC1)
Chromosome and associated proteins [BR:cvf03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104285997 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     104285997 (HDAC1)
    BRAF-HDAC complex
     104285997 (HDAC1)
    REST complex
     104285997 (HDAC1)
    SHIP complex
     104285997 (HDAC1)
    MiDAC complex
     104285997 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104285997 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104285997 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    104285997 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104285997
NCBI-ProteinID: XP_009882830
LinkDB
Position
Unknown
AA seq 451 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKDEKEEEKAKEEKAEPKGVKEETKST
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaaccccacaggattcggatgacccacaacctactgctgaactatggcctctacagg
aagatggagatctatcgccctcacaaggcaaatgcggaagaaatgaccaagtaccacagt
gatgactacataaaatttctgagatctattcgcccagataacatgtctgagtacagcaag
cagatgcaaagatttaacgttggggaagactgccccgtgtttgatgggttgtttgagttt
tgtcagctctctgctgggggctcagttgccagtgctgtgaagctgaacaagcaacagaca
gacattgccgtgaattgggcgggaggccttcaccacgctaaaaagtcggaggcttctggc
ttctgttacgtcaacgatatcgtcctagctatcttggagctcctgaagtatcaccagagg
gtgctgtatattgacattgatattcaccacggagatggcgtggaggaagccttttatacc
acagaccgtgtcatgaccgtgtcctttcataagtacggagagtacttcccaggaacaggg
gacctacgggatattggtgcaggcaaaggcaagtactacgctgtcaactatcctctccgg
gacggaattgatgatgagtcctacgaagcaatattcaaaccagtgatctctaaagtgatg
gagacgttccagcctagcgcagttgtcttgcagtgcgggtcagattcgctgtcgggggac
aggctgggttgttttaatctgaccatcaaaggtcacgccaagtgtgtggagtttgtaaaa
agttttaatttgcctatgctgatgctgggaggaggtggctatacaatccgcaacgtggct
agatgctggacctacgagactgctgtggctttggacactgaaattcccaatgaacttcca
tataatgactattttgagtactttggaccagactttaagctccacatcagtccctcgaac
atgactaaccagaataccaatgagtatcttgagaagatcaagcaacgtctctttgagaat
ctgcgcatgctgcctcatgcccctggcgtccagatgcagccaattcctgaggatgctgtt
caggaagacagtggagatgaagaggaagaagatcctgagaaacgcatttcaatccgcaat
tctgataagagaatatcctgtgatgaagaattctctgactctgaagatgaaggggaagga
gggcgcaaaaatgttgccaactttaagaaagcgaagcgtgtgaaaacagaagaggaaaag
gaggaagaggagaagaaagatgagaaagaagaggaaaaagcaaaagaggagaaagcagaa
cccaaaggggtgaaggaagagacgaaatccacctaa

DBGET integrated database retrieval system