Charadrius vociferus (killdeer): 104286074
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Entry
104286074 CDS
T08577
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104286074 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvf03041
]
104286074 (PRPF38A)
Spliceosome [BR:
cvf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104286074 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
104286074 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104286074
NCBI-ProteinID:
XP_009882918
UniProt:
A0A0A0AG99
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRDVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPAVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggacgcgcacagcatccatggcaccaacccgcagtacctg
gtggagaagatcatccgcacccgcatctacgagtctaagtactggaaggaggagtgcttc
ggcctgacggccgagctggtggtggacaaggctatggagctgagggacgtggggggtgtc
tatggcgggaacataaagccgacgcccttcttgtgcttgacgctgaagatgctgcagatc
cagcccgaaaaggacatcatcgtggagttcataaaaaacgaggacttcaagtatgtccga
atgcttggtgcgctgtacatgagattgacaggcactgccattgactgctacaagtatctt
gaaccgctgtacaatgactatagaaaaataaaaagtcagaacagaaatggagaatttgaa
ctgatgcatgtggatgaatttattgatgaactactccatgaggaacgtgtatgcgatatc
attctgcctcgattacagaaacgttacgttctggaagaagctgagcaacttgaacctcgc
gttagtgctttggaagaagacatggatgatgtagaatctagtgaggaggaggaggaggaa
gatgaaaagctggagcgagcaccctctcctgaccaccgcagaagaggctacagagacctt
gataaacctcgcagatctccagctgtgcgatacaggcggagccgaagcaggtctccaaga
aggcgaagccgctctccaaagagaagaagtccgtcaccacgccgggagaggcatcgcagc
aagagcccaagacgacaccggagcagatccagggagaggcgccacagatcaagatctaaa
tctccagggcatcatcgtagtcacagacacagaagtcattccaaatcacctgaaagatct
aagaaaagtcataagaagagtcggcgagggaatgaataa
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