KEGG   Charadrius vociferus (killdeer): 104286276
Entry
104286276         CDS       T08577                                 
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
  KO
K11101  patched 2
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    104286276 (PTCH2)
SSDB
Motif
Pfam: Sterol-sensing TRA2_N Patched
Other DBs
NCBI-GeneID: 104286276
NCBI-ProteinID: XP_009883156
LinkDB
Position
Unknown
AA seq 1224 aa
GPGGQGPRLWLRARFQALLFALGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHL
WVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKRDGENILTQEALQLHLEAALAASKV
QVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLFPCVILTPLDCFWEGAKLQGGSAYL
PGRPDIQWSNLDPLQLMEELGQFTSLEGFKELLDKAEVGQAYGDREDCGGLAALLPTPWS
KSLMPPLCLQSPDIPAELSGGCHGFSRKFMRWQEELILGGTTKDSQGKLLRAEALQTMFL
LMSPRQLFEHFKDDYEIHDISWSEEKAGAILEAWQRKFVELAQDSIPPNATQSVHAFSTT
TLNDIMKSFSDVSVIRVAGGYLLMLAYACVTMLRWDCSRSQGAVGLAGVLLVALSVASGL
GLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTS
VALTSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLFVFPAILSLDLYRREKRR
LDILCCFYSPCSSRVIQIQPQELADANDNHACHPSPYGHPGVATSTQITTTVQAFTRCDP
SGHHVVTVLPPTSQVCTSPAVLLPPTDPLGSQVFTSSSSTRDLLAQVDEAKGGRECVPLP
FCRWSLADFAREKYAPLLLRTRTKVVVAVLFLALLGLSLYGTTMVPDGLYLTDIVPRDTK
AHAFISAQFKYFSFYNMFIVTKGGFHYPGAQAALLSLHQAFSTVKYVVREGNSDLPKMWL
HYFQDWLRGLQATFDRDWQAGRITHDSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTR
RLVDENGIIPPDTFYICLTVWASNDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAA
QPLEFAQFPFYLSGLRRTADFVEAIESVRAICREAAQRHGVLSYPSGYPFLFWEQYIGLR
HWFLLAISILLACTFLVCALLLLNPWTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVVI
LIASVGIGVEFTVHVALGFLTAAGSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEF
DFIMRYFFAVLTILTLLGLLNGLVLLPVLLSIIGPPPEASPVDNAPRLPTPEPVPPCLGP
GGLYVRRAPAWPATFPDPSDTERSYAEGVVPGSPRGPFIVPPTPAHILLEAGKDPSFPRI
TVSVSACRGIAGSPASPRGGGHSR
NT seq 3675 nt   +upstreamnt  +downstreamnt
gggcccgggggccaagggccccggctgtggctgcgggcccgctttcaggcgctgctcttc
gccctgggctgccggatccagcggcactgcgggaaggtgctcttcgtggggctgctggtg
ttcggggcgctggccgtggggctgcgggtggcctccatcgagaccgacatcgagcacctc
tgggtggaagcgggcagccgagtgagccaggagctgcgctacaccaaggagaagctgggc
gaagagtccgtctacacctcccaaatgttgatccagaccccgaagcgggatggggagaac
atcctgacgcaggaggccctgcagctccacctcgaggcggccctggccgccagcaaagtc
caagtctcgctgtacggaaaatcgtgggatttgaacaagatctgctacaagtcgggtgtc
cccatcattgagaacggcatgatcgagaggatgatagagaagctgttcccctgtgtgatc
ctgacgccgctggactgcttctgggaaggcgccaagctgcagggaggctcagcctacctc
ccgggccgcccggacatccaatggagcaacctggaccctctgcagctgatggaggagctg
gggcagttcacgtcactggaaggcttcaaagagttgctggacaaggcagaggtggggcag
gcttatggggaccgggaggattgcggggggcttgctgctcttctgcccaccccatggtcc
aaatctctgatgcctcccctctgcctgcagagccccgacatcccagccgagctctcaggg
ggttgccacggcttctccaggaagttcatgcgctggcaggaggagctgattttaggtggc
acgaccaaagactcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctc
ctcatgagcccccggcagctctttgagcacttcaaggatgactatgagatccatgatatc
agctggagcgaggagaaggcgggtgccatcctggaggcctggcagaggaaattcgtggag
ctggcacaggactccatcccgcccaatgccacgcagagcgtccacgctttctccaccacc
acgctcaacgacatcatgaagtccttctctgacgtcagtgtcatccgggtggctgggggc
tacctcctcatgctggcctacgcctgtgtcaccatgctgcggtgggactgctccaggtcc
caaggggccgtgggcctggccggggtcctgcttgtggctctctccgtggcctctggcctg
gggctttgctcattgctgggcatctccttcaatgcagccaccacacaggtcctgcccttc
ctggcccttggcattggtgtggacgacatgttcctcttggctcatgccttcactgagacc
agccagcacatccccttcaaggagcggacgggcgagtgcctgaagcgcacgggaaccagt
gtggctctcacctccgtcagcaacatgatcgccttcttcatggcagccctggtgcccatc
cctgccctgcgcgccttctccctccaggctgcggtggttgtggtgttcaactttgccatg
gtgctattcgtcttccctgccatcctgagcctggacctgtatcgccgggagaaacggcgg
ctcgacatcctctgctgcttctacagcccttgctcctcacgggtcatccagatccaaccc
caggagctcgccgatgctaatgacaaccacgcctgccacccctccccttatgggcacccc
ggcgtggccaccagcacccagatcaccaccaccgtgcaagccttcacccggtgcgacccc
tcaggccaccatgtcgtcaccgtcctgccacccacctcccaggtgtgcacctcacctgcc
gtcctcctgccccccaccgaccccctgggctctcaggtcttcacctcgtccagctccacc
cgggacctgctggcccaggtagatgaagccaagggtgggcgggagtgtgtccccctgcct
ttttgccgctggagccttgctgacttcgcccgggagaagtacgcccctctcctcctgcgg
acccggaccaaggtggtggtggcggtgttgttcctggcgctgctggggctgagcctctac
ggcaccaccatggtgcccgacgggctttacctgacggacatcgtgccgcgggacaccaag
gcacatgccttcatctcggcccagttcaagtacttctccttctacaacatgttcatcgtc
accaagggtggcttccactacccgggcgcccaagccgccctgctcagcctgcaccaggcc
ttcagcaccgtcaagtacgtggtgcgggagggcaacagcgacctgcccaagatgtggctc
cattacttccaggactggctgcgagggctccaggccaccttcgaccgggactggcaagct
gggcgcatcacccatgacagctaccgcaatggctctgaagatggggcgctggcgtacaag
ctcctaatccagaccggcaacaagaaggagcccttcaacttcaatcagctgaccacgcgg
cggctggtggacgagaatggcatcatcccccctgacaccttctacatctgcctgacggtg
tgggccagcaatgaccccttgggctttgccgcttcccaggccaacttctacccgccgcca
cctgagtggatccatgacaagtacgacaccacgggcgagaacctgcgaatcccagcagcc
cagccgctggagtttgcccagttccctttctacctgagcgggctgcgtcgcacggccgac
ttcgtggaggcgatcgaaagcgtgcgggccatctgccgggaggccgcccagcgccacggg
gtgctgagctaccccagcggctaccccttcctcttctgggagcagtacatcggtctgcga
cactggtttttgctggccatcagcatcctgctggcctgcaccttcctcgtctgcgccctg
ctgctgctcaacccctggacggccggcatcatcgtctccatcctggccatgatggcggtg
gagctgtttggcatcatggggctgatgggcatcaagctgagtgccatccccgtggtcatc
ctcatcgcctcggtgggaatcggtgtggagttcaccgtccacgtggccctgggcttcctg
acggctgcggggagcaggaacgtgcgctcagctgcggccctggagcacacctttgccccc
gtgatggacggtgccgtctccaccctcctgggtgtcctcatgttggccggctccgagttt
gacttcatcatgaggtacttctttgccgtgctcaccatcctgacgctgctagggctgctc
aatgggctggtgctgctgccagtcctgctctccatcatcggaccaccccctgaggcatcc
ccagtggataatgccccccgcctgcccactccggagccggtgcccccatgcctgggcccc
ggagggctgtacgtccggcgtgccccagcctggcccgctactttcccagacccctcggac
acggagcgcagctacgcagagggtgtggtgccgggcagtccccgggggcccttcattgtg
ccccccaccccggcacacatcctgctggaggccggcaaggaccccagcttcccccgcatc
accgtgagtgtctctgcctgccgtggcatcgccggctcccccgcctccccccgggggggg
ggacactcccgctga

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