Charadrius vociferus (killdeer): 104286334
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Entry
104286334 CDS
T08577
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104286334 (TRMT13)
Enzymes [BR:
cvf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104286334 (TRMT13)
Transfer RNA biogenesis [BR:
cvf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104286334 (TRMT13)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
104286334
NCBI-ProteinID:
XP_009883213
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MPREAAVTPVSDGEEAAEEAGLPAPGATAAAWETRKQRPGRQRCGSQNDRKRIPCPLDPK
HTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDVAEITEKQVPISSLSKEELENLII
KLKKASNGLELRLKEQILSHQALQEALNDPKNGESAFKHLKQQASILGNMEKLHLLGPGR
CFVEFGAGRGKLSHWVDVALQNVENVQFLLVERATTRFKVDGKHKRRDAVFERLQVDIQH
LCLKKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYTSWCDGENEEPAPKRSRTDKT
EVASNNSADNESSKDDCKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPLEFNYFQRM
SSWATCGMRETTTKASTSQESEDQTNDTEEHEQTFSKTESGSDTLQGILTVEERKEVGCL
CKRLIDHGRIEYLQQRGYKAALQYYTESAVSLENVLLTAVPSPSLISEPTT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggaggccgcggtaacgccagtttcagacggcgaggaggcggcggaggaggcg
ggcctgcccgcccccggggcaaccgctgcggcctgggagacgcgcaaacagcggccgggc
cggcagcgctgcgggtcccaaaatgacagaaaaagaattccatgccctcttgatccaaaa
cacactgtatatgaagaccaactacaaaagcatttaaaaaaatgtaattcaagagagaag
ccaaagccagtctactttgttcaagatattaatgcaggtttaaaagatgtagcagaaata
acagaaaaacaagtacctatctcttctctatccaaagaagagctggagaatttaattatc
aagttgaaaaaagcaagtaatggcctggaacttcgccttaaggaacaaatactgtcccac
caggctttacaagaagccttaaatgacccaaagaatggggaatccgctttcaaacacttg
aaacaacaggcttctattttaggtaacatggaaaaattacatttacttggtccaggaaga
tgttttgttgagtttggagctgggcgaggaaagctgtctcattgggttgatgttgcctta
cagaacgtggaaaacgttcagtttttgcttgtggaaagggcaactacaagattcaaggtg
gatggaaaacataaaaggagagatgctgtatttgaaaggcttcaagttgatattcagcat
ttatgtttaaagaaggtacctattttggagaagaaaaaactaccagtggtaggaattggg
aagcatttgtgtggtgctgcgacagatctcgctttgagatgcttggttgaaagttacaca
agttggtgtgatggagaaaatgaagagcctgcaccaaaacgctctaggactgataagaca
gaggtggcttctaacaattctgctgataacgaaagcagcaaagacgactgtaagcctgta
gctggaattgttattgcactatgttgccatcataagtgtgactggacacattatgtaggc
agagaattctttaaatcagtaggacttggaccattagaatttaattattttcagagaatg
agtagctgggccacttgtggcatgcgagaaaccacaaccaaagcctctacaagtcaagaa
agtgaagatcaaactaacgacacagaagaacatgagcaaacattcagcaagacagagagt
ggttctgatactttacaagggatacttactgttgaagaacgaaaggaggtaggttgcctc
tgtaaaaggctgattgatcatggacggattgagtatttacaacaacgagggtacaaggct
gcactacagtattatacagagtctgctgtgtccttggagaatgtcctgttgacagctgtc
ccgagtccgtctttgatatcagagccaactacgtga
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