Charadrius vociferus (killdeer): 104286389
Help
Entry
104286389 CDS
T08577
Symbol
FIP1L1
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104286389 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104286389 (FIP1L1)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104286389 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
104286389
NCBI-ProteinID:
XP_009883280
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
NEAERPEEEKASAPPPPGSEEEAAENGVVKTKVAEAEDDSDSDSDDDEDDVQVTIGDIKT
GAPQYSYGAAPVNLNIKTGGRAYGSSGAKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWR
KPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEILPVTSTTNKITAEDNAMEVRPSAEI
LDGRYHLFKVQQGRTGNLEKELAVQSTKADFTSPPALFKTGIPTNRSSMSSQSQASTASR
KASXGIRKWQEQYRRGKSPKLRRLSGTIDVIGQTITISRVEGRRRANENSNIQVLSERSN
PEVDNFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPG
GPPPSLIPTIESGHSSGYDGRSVRAFSYGSVTFPHLAGSAPSWSSLMDTSKQWDYYARRE
KDRERDRERSRDRDRDRDRDRDRERTRDRERDRDHSPTPSVFNSDEERYRYRDYAERGYD
RHRTSREKEDRHRDRRHREKEESRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKE
ASGEPAPEQENTEAAPVE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
aatgaagcagagaggccagaggaagaaaaagctagtgctccacccccacctggaagtgaa
gaggaagctgcagaaaacggcgttgtgaaaacgaaggtggcagaggctgaggatgacagt
gatagtgatagtgatgatgatgaagatgatgttcaagtcaccataggggatattaaaaca
ggagctccacagtatagttacggagcggcacctgtgaatctcaatattaagacaggagga
cgagcttatggatcttctggtgcaaaagttaaaggggtggatctagatgcaccagggagt
attaacggtgtaccacttctggaagtagatttagattcttttgaagataaaccttggaga
aagccaggggctgatctctcagattatttcaactatgggttcaatgaagatacctggaaa
gcttactgtgaaaaacaaaagagaatacgaatgggtcttgaaattttaccggttacctca
accacaaataaaattacggctgaagacaatgctatggaagtaagaccaagtgcagagatt
ctcgatggcagataccatctttttaaggtacagcagggcagaactggaaatttggagaaa
gagttggcagtgcagtcgaccaaagctgatttcacatctcctcctgccttattcaaaaca
ggaattccaaccaacagaagcagcatgtcttcacagtcacaggcaagcactgcctccaga
aaagccagttgaggcattagaaagtggcaggaacaatataggaggggcaaatcacccaaa
ttaaggcggttatctggcacgatagatgtgattggacagaccatcactatcagcagggta
gaaggacgacggcgtgctaatgaaaacagcaacatacaggttctttcagaacgatctaat
cctgaagtagacaattttaccaagccacctccatttttccctccaggagctccacctacc
caccttccaccacctcctttcctcccaccccctccaactgtcagtactgctccacctctg
attcccccaccaggtataccaataacagtgccaccaccaggctttccaccaccacctggc
ggtcctccaccttccctcatacccacaatagaaagtggacattcttctggctatgatggt
cgttctgttcgtgcattttcatatggcagtgtcacctttccgcaccttgcaggttctgct
ccttcatggtctagtcttatggacaccagcaaacagtgggattactatgcacgaagagag
aaggatagggaacgtgacagagagcgatcccgagatcgggatcgggaccgagaccgagac
agagatcgagaacgtaccagagacagggaaagggaccgagatcacagtccaactccaagt
gtgttcaacagtgatgaagaacgatacagatacagagactatgcagaaagaggctatgac
cgccatagaacaagtagagagaaagaagaccgacacagagacaggagacacagagagaaa
gaagagtctagacacaagtcatctcgaagtaacagcagacgtcgtcacgacagtgaagaa
ggggacagccacagaaggcacaaacacaaaaaatccaaaagaagcaaagaaggaaaagaa
gccagcggtgaacctgctcctgaacaggaaaacactgaagctgcccctgtggaatag
DBGET
integrated database retrieval system
