Charadrius vociferus (killdeer): 104286394
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Entry
104286394 CDS
T08577
Symbol
CLOCK
Name
(RefSeq) LOW QUALITY PROTEIN: circadian locomoter output cycles protein kaput
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvf03000
]
104286394 (CLOCK)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104286394 (CLOCK)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104286394 (CLOCK)
Transcription factors [BR:
cvf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104286394 (CLOCK)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104286394 (CLOCK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
bHLH_NPAS4
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
104286394
NCBI-ProteinID:
XP_009883285
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MFFTISTHKMSSIADRNDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSM
LPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDG
FFLAIMTDGNIIYVSESITPLLEHLPSDLVDQSVFNFIPEGEHSEIYKILSSHLLESDSL
TPEYLKSKNQLEFCCHMLRGTIDPKEQPTYEYVKFIGNFKCLNNVPNLAHNGFEGTIQRS
HRPSYEDKVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYL
PFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYH
QWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEITADKSQDSGSDNHINTVSLKEA
LERFDTSPTPSASSRSSRKSSHTAVSDHSSTPTKMTVDTSTPPRQSLSGHEKTAQRRSSL
SSQSLSSQSLGQPVAQPTMSQPTTLQLQSGMSQPVFQFSAQLGAMQHLKDQLEQRTRMIE
ANIHRQQEELRKIQEQLQIVHGQGLQLPSGPNVPKIHSTEAAVPEMFLQQSTSGLNFGSV
QLASGNSSNVQQLTPINMQGQVVQSNQTQSGMNTGHISTPHMIQQQPLQSTATQHNQQNV
ISGHNQQSSLASQSQNTVSAPLYNTMVISQPTTGNVVQVPSSLPQNNNQNAAAVTTFTQE
RQIRFSQGQQLVTKLVTAPVACGAVMVPSTMFMGQVVTAYPTFAAQQQQPQTLSITQQQQ
QQQSQQDQQQQQLTTVQQPAQPQLTQHPQQFLQTSRLLHGNQSAQLILSAAFPLQQSTFT
QSHHQQHQSQQQQQQQLSRHRTDKMTDPSKVQPQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgttttttaccataagcacccataaaatgagctccattgcagacagaaatgatggaagc
atttttgatgggctggtggaagaagatgacaaagataaagcaaagagagtgtctagaaac
aagtctgaaaagaaacgtcgcgatcagtttaatgtacttatcaaagagctgggttccatg
cttccaggtaatgctcggaagatggataaatccactgtactgcagaagagcattgacttt
ttacggaagcacaaagaaattactgcacaatcagacgccagtgagattcgacaagactgg
aaaccgacattccttagtaacgaagaattcacacagttaatgttagaggctcttgatggt
ttttttttagcaattatgacagatggaaatataatatatgtgtctgaaagtataactccc
ttacttgaacatttgccatctgatcttgtggatcagagtgtatttaattttatcccagag
ggggaacattcagaaatttataaaatattgtcttctcatctgctggaaagtgattcattg
acacctgaatacttaaaatcaaaaaatcaactagaattctgttgccatatgctgcgagga
acaatagatccaaaagagcaacctacatacgaatatgtaaaatttataggaaatttcaaa
tgtttgaataatgttcccaacttagcgcacaacggttttgaaggaactattcagcgctcg
caccggccttcatatgaagacaaagtttgctttgtagccacagttagattagctacacct
cagtttatcaaggaaatgtgcactgttgaagaacccaacgaagagttcacatctagacat
agcttagaatggaagttcctattcttggatcacagggcacctccgataataggttatctt
ccgtttgaagttttgggaacatcaggctatgattattatcatgtggatgatctagataat
ctggcaaaatgtcacgagcatttaatgcagtatgggaaagggaagtcatgttactacaga
ttccttacaaagggacaacaatggatttggctgcaaacacattactatatcacgtatcac
cagtggaattccaggccagagtttattgtctgtacgcacacagttgtaagttatgcagaa
gttagagcagaaagacgacgagaacttggtattgaggagtctcttccagagataacagca
gataaaagtcaggactctgggtctgacaaccacataaacacagtgagtctcaaagaagca
ctggaaaggtttgataccagccccacaccttctgcttcctccaggagttcaagaaaatct
tcacatactgcagtatcagatcattcatcaacgccaactaaaatgacggtggacactagc
actcctccaaggcaaagcttatctggtcatgaaaagactgcgcaaagaagatcatctctg
agtagtcagtctttaagctcccagtctcttggacaaccagtagcgcagccaacaatgtct
cagcctacaactttacagctccagtctggcatgtcccagcctgtgtttcagttttcagct
caattaggagctatgcagcatctaaaggaccagctagagcaaagaacacgcatgatagag
gcaaatattcatcgacaacaggaagagttgcgtaagattcaagagcagcttcaaattgtc
cacggccaagggctccagctgccatctggacctaatgtgcctaaaatccatagcaccgaa
gctgctgttcctgagatgttcttgcagcagtcaacttctggactcaactttggttctgtg
cagcttgcgtctggaaattcttcaaatgttcagcagcttacgccaataaacatgcaaggt
caagttgttcagagtaatcagactcagagtgggatgaacacaggccatataagtactcca
cacatgatacagcaacagcctttgcagagtactgcaacacagcataatcaacaaaatgta
atcagtggacacaatcaacagtcttctcttgccagtcagtcacagaacacagtctcagca
cctttgtataacactatggtgatttctcagccaacaacaggaaatgtggtccaggttcct
tccagcttaccacagaacaataaccagaatgctgctgcagtaaccacttttacacaggaa
agacaaatcagattttctcaaggtcagcaacttgtaacaaaacttgtcacggccccagta
gcgtgcggcgcggtaatggtaccgagtactatgtttatgggacaggtggtgacggcttat
cccacttttgctgcccaacagcagcagccacagactttgtcaataacgcaacagcagcag
cagcagcaaagtcagcaagaccagcagcagcagcagctcaccacagttcagcaaccagct
cagccgcagctgacccagcacccccagcagttcctacagacatccaggttacttcatgga
aatcagtcagctcagcttatcctctctgctgctttcccactacaacaaagcacttttact
cagtcccaccaccagcagcatcagtcgcagcagcagcagcagcagcaactttcgcgacac
agaactgacaagatgactgatccttccaaagttcagccacaatag
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