Charadrius vociferus (killdeer): 104286562
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Entry
104286562 CDS
T08577
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03030
DNA replication
cvf03420
Nucleotide excision repair
cvf03430
Mismatch repair
cvf03440
Homologous recombination
cvf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104286562 (RPA1)
03420 Nucleotide excision repair
104286562 (RPA1)
03430 Mismatch repair
104286562 (RPA1)
03440 Homologous recombination
104286562 (RPA1)
03460 Fanconi anemia pathway
104286562 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvf03000
]
104286562 (RPA1)
03032 DNA replication proteins [BR:
cvf03032
]
104286562 (RPA1)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104286562 (RPA1)
Transcription factors [BR:
cvf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104286562 (RPA1)
DNA replication proteins [BR:
cvf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104286562 (RPA1)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104286562 (RPA1)
MMR (mismatch excision repair)
104286562 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104286562 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
CATSPERD-E_C
RTL1-8_LDOC
RADX_3rd
Motif
Other DBs
NCBI-GeneID:
104286562
NCBI-ProteinID:
XP_009883477
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MQGENVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLAAQ
CVCQVNRFIVNSLKDGRRVVILMDLDVLKTADKVGGNIGNPVPYNEGQGQQRSSAPAANP
APSKPQQQNGNLSGAGPAAPKYHAPSNQFGKASAVSSVKTPGGSQAKVVPIASLNPYQSK
WTICARVTQKGQIRTWSNSRGEGKLFSVELVDESGEIRATAFNDQADKFFPLIELNKVYY
FTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFVSISDLENTPKDSI
VDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGHEAEQFDGSRQPVI
AIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGPAA
GANTNWKTLFEAKSENLGQGDKADYFSCVATVVHLRKENCMYQACPSQDCNKKVIDQQNG
LYRCEKCDREFPNFKYRMMLLVTIADSLEYQWLTCFQETAEFILGQNAAFLGELKEKNEQ
AFEEVFQNANFNTYEFRIRVKQETYNDESRIKATAVDIKPVNYREYSKRLIASIRRNAQL
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggggagaacgtctccaagcccgtgctgcaagtcatcaatacacgggctattgct
acaggaaatgggccaccacgttaccgagtgttgatgagtgatggggttaacacactctcc
tcattcatgttggcaacacagctgaactctctggtggaagaggaacgcttagcagcccaa
tgtgtttgccaggttaacagattcattgtcaacagcctgaaagatggaaggagagtggtt
atactgatggatttagatgttctgaaaactgctgataaggttggtgggaatattggcaat
ccagtgccgtacaatgaagggcaagggcaacaacgttcttcagctccagcagcaaatcca
gcacccagcaaaccacagcaacaaaatggcaatttgtcaggagcaggtcctgctgccccg
aagtaccatgctccctcaaaccagttcggtaaagcgagtgctgtcagctctgtgaagaca
ccagggggatcgcaggccaaagtagtgccgatcgccagcttgaacccgtaccagtcgaag
tggaccatttgtgctcgtgttacccaaaaaggccagatccgcacgtggagcaactcccgt
ggtgaaggaaagctcttttctgtagagctagttgatgaaagtggtgagattagagctact
gcattcaatgatcaagcagacaagttctttccactcattgaattgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactat
gagattacattcactaatgagacttcagttgtgccctgtgatgatgcccagcatcttcca
tctgttcagtttgagtttgtatccatctctgacttggagaacacacccaaagactcaatt
gtcgatgtaattggaatttgtaagagctatgaagatgtcactaaaattatagtgaaagct
aacaatagggaggtatcgaagaggaacgtgcatctgatggatacatcggggaaactggtg
acagctacgctgtggggacatgaggctgaacaatttgatggttctagacaacctgtgata
gccatcaaaggagcccgagtctctgatttcggtggtagaagcctgtctgtcctgtcttcg
agtacagttgtcatcaaccctgatagcccagaggcttttaagctccgaggatggtttgac
tctgaggggcagcttctggaatgtgcctcaatctctgatgtcaggggtgggccagcagct
ggggcaaataccaactggaaaactttgtttgaagccaaatctgagaacttgggacaagga
gataaggcggattatttcagctgtgtggccaccgtagtacatctgcgcaaagagaactgt
atgtaccaggcgtgtccctctcaggattgcaataagaaagtgatagaccagcaaaacgga
ctgtatcgttgtgaaaagtgtgatcgtgaattccccaacttcaagtaccgcatgatgctt
ctggtgaccattgcagacagtctagagtatcagtggttgacctgtttccaagagacagca
gaattcattcttgggcaaaacgcagctttcctgggagaactgaaggaaaagaacgagcag
gcatttgaagaagtgttccaaaatgcaaacttcaacacatatgagttcaggatccgagta
aaacaggagacttacaacgatgaatctcgtattaaggctacagcagtggacatcaaacct
gtgaactacagagaatacagcaagaggttgattgcaagcatcaggagaaatgctcaacta
cagtga
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integrated database retrieval system
