Charadrius vociferus (killdeer): 104286606
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Entry
104286606 CDS
T08577
Symbol
SCARF1
Name
(RefSeq) LOW QUALITY PROTEIN: scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104286606 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104286606 (SCARF1)
Membrane trafficking [BR:
cvf04131
]
Endocytosis
Phagocytosis
Scavenger receptors
104286606 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104286606
NCBI-ProteinID:
XP_009883520
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MGSARPILCLQLWLWVQSSAQELDPDGRNVCRPPAGPACCPGWKQEGRECTAALCEGEDA
CGEDEVCVRPGVCLCKPGFFGADCSSRCPEQYWGPDCKRRCPCHPNGRCDPASGHCTCDP
NHWGEVCQXPXXXXXXPPGHCRCEPGWWAPTCKKQCQCNLASSHCDPLTGHCRCLPGWWG
SKCSFKCSCNLSPCAQETGKCECKAGFWGPACQRRCDCLHGSCNPLSGHCSCSPGYQGRS
CRDPCPAGKYGSECVHSCGSCKRSQPCSPVDGFCLACQPGWNGTLCKEPCAPGFYGQDCL
QLCPRCRRGEVCDPETGSCPHCEPGWTGPSCNSSCPAGTFGDGCQLLCPECVAGSCDPVS
GACICQAGYWGASCNDTCLEGYFGVNCSSPCQCSRGTCHPVRGDCVLSFKDHGALAAAIL
VPLLLMLLCVACCCCGAGPADARDRYFFTFQPSMQNLVSRVPXCPSLLCRAAVPDDDVVA
RMKHHVRGVLANLSAMMPCFSLGGYKLPKVTGKISRAANSPLKARAPRGARAQLGVLSSP
VSHHDAELPFNPSFIEPPSAAWVSDSSFSSFDTDNEGPEYSVPPREGIPLLGGAELQDGV
SPPSEALPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAAETPSPGRKPKT
PWGSSKLSPPAGDTATEPPTERPASDCYESPEPLSKGEESHRPSPRATPGGRRRVVSGTR
HVAQRVEALEAAAKSSSWEAKGKEPNVTTIYMMVGTAGQDPKADGSGEGPVQAMLKRLGS
LQKGKWAAKEEPKVRRSVEAIQKPPRWALAQCRDSVNSCKQRESVPGAPAEPSPGKNQHP
PGKRRSFLLASPSPKSTGAQDGSVDAIDAMERGKSPELVLSLEIKGQAVPEEEPKYENVT
SSSADSTHGSAEEPPATPVAT
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcccggcccatcctctgcctccagctgtggctgtgggtgcagagctctgcc
caggagctcgaccctgacggcaggaatgtctgcaggccccccgccggcccagcgtgctgc
cccggctggaagcaggaagggcgggagtgcacggccgctctctgcgagggagaagatgcc
tgcggggaggatgaggtctgtgtgagacccggcgtttgcctctgcaaacccggcttcttc
ggagcagactgcagttcccgctgccccgagcagtactggggtcctgactgcaagcggaga
tgcccatgtcaccccaacgggcgctgcgacccggcgagcggacactgcacctgcgacccc
aaccactggggagaggtctgccagnttccnnnnnnnnnnnnnnnnnncccacccggccac
tgtcgctgtgagccgggctggtgggcacccacctgcaagaagcaatgtcaatgcaacctc
gccagctcccactgcgaccccctcaccggccactgccgctgcctgccaggctggtggggc
agcaagtgcagcttcaaatgctcctgcaacctctcaccctgtgcccaggagacgggcaag
tgcgaatgcaaggctgggttttggggaccagcgtgccagcggcgctgcgactgcttgcat
ggctcctgcaaccccctcagcggccactgcagctgcagccccggctaccagggcaggagc
tgccgggacccctgtccagcagggaaatacgggtctgaatgtgtgcacagctgtgggagc
tgcaagcgcagccagccctgctcgcctgtggacggcttctgcctggcctgccagcccggc
tggaacgggaccctctgcaaggagccctgcgcccccggcttctacggccaggactgcctc
cagctgtgtccccgctgccggcgcggggaggtctgcgacccagagacggggtcctgccca
cactgtgagccgggctggacaggacccagctgcaacagctcctgccctgctggcaccttc
ggtgatggatgccagctcctctgccctgagtgtgttgcagggagctgtgaccccgtgtcg
ggagcttgcatctgccaggcgggatactggggagccagctgcaatgacacctgtctggag
gggtattttggagtgaactgttcctcgccctgccagtgctcccgtgggacctgccaccct
gtgcggggtgactgcgtgttgagttttaaggaccatggggcccttgcggccgccatcctc
gtccctctcctgctgatgctgctctgcgtcgcctgctgttgctgcggagccggcccagca
gatgctagagacaggtatttttttacatttcaaccttcaatgcaaaaccttgtctcccgt
gtcccttgatgtccttctctgctgtgcagggcggccgtgccggatgatgatgtggtggcc
cggatgaagcaccacgtgcggggggtgctggcgaacctcagcgctatgatgccttgcttt
tccctgggcggctacaaacttcccaaagtcacaggtaaaataagcagagctgccaacagc
cctttgaaggcccgagcaccccggggtgccagagctcagctgggtgtcttgtcctcccca
gtttcccaccacgacgcggaacttcccttcaaccccagcttcattgagccgccatcggct
gcgtgggtttcagacagctccttctcctcctttgacaccgacaacgagggacccgagtac
tccgtcccacccagagaaggcatcccactgctggggggggctgagctgcaggatggggtg
tcccctcccagcgaggcgctcccagacccatctgccttcgactccgaggatgtctcgcag
ccctttgccatccctcgcacctccagcatcgccaaggccaagcggccctccgtgtccttt
gctgaggggacaaaatttggggcggcggagactcccagccccggccggaagcccaagacc
ccgtggggctcatccaagctgtccccaccagcgggggacacggcaactgagccccccact
gaacgaccagccagtgattgctacgagagccccgagcccctcagcaaaggggaggaaagc
caccggccatcaccccgagccaccccggggggacgccgtcgggtggtctctggcaccagg
catgtggcccagagagtggaggctcttgaagcagctgcaaaatccagcagctgggaggcg
aaggggaaggagcccaacgtcaccaccatctacatgatggtgggaacggccgggcaggac
cccaaggcagatgggagtggcgagggaccagtccaggccatgctcaagcggctgggcagc
ttgcagaagggcaagtgggctgcaaaggaggagcccaaggtgaggaggagcgtcgaggcc
atccagaaaccgccccgctgggccctggcacagtgcagagactcggtgaatagctgcaag
cagagggagagtgtaccgggggctcccgctgagccatcccctggcaagaaccagcatccg
cctgggaagagacggtccttccttctcgcatctccctcaccaaaaagcaccggggcccag
gatgggtctgtcgatgctatagatgccatggagaggggcaaaagccctgaattagtcctc
agccttgaaataaagggacaggctgtcccagaggaagagccaaaatacgagaacgtgact
agcagcagtgccgattcgacccacggctccgctgaggagccaccggccacccctgtggcc
acctga
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