Charadrius vociferus (killdeer): 104286705
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Entry
104286705 CDS
T08577
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104286705 (SMC6)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104286705 (SMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
TMP_3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104286705
NCBI-ProteinID:
XP_009883629
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MGKRKEESISKPGSSKRQRQEYTDEHSDESNEEEISQLSADSNLSSLSTAGEVGIIESIQ
LKNFMCHSMLGPFQFGSNLNFVVGNNGSGKSSVLTALIVGLGGKATATNRGSSLKMFVRD
GETSADISITLRNQGRDAFKPEVYGSSIIVNQHINLDGSRSYRLKSKSGTLISSKKEELV
GILDHFNIQVDNPVSVLTQEMSKHFLQSKNEGDKYKFFMKATQLEQMKEDYSSIMKTKEN
TCIQIEQGAERLQELKLLYCEKKDRYKSIGFVNEMRNHLEDLKHKMAWAVVGEMEKEIQP
IREGIRAKEGNTEKFVQKLEECQVKVNEAEEKYKAIQDKLITISEEAQALHPQCVSLKAD
VQAKRKAVNEAEVLYNRFAIELKRLGKDDEQLRKRIEELKSSANQVSEPEKLERQRKIAH
LREQLKAFHDEEIMIGQQVDQFQQAISKCKEEHTRLRREDCDMKQALDAKQKQLRELKDS
KTNTLKRFGPHIPEFLEAVETAYRQGCFKHKPVGPLGAFIHPKDAELTLAVESCLKSLVQ
AFCCDNHSDERALQLLMSKYYPQGFRPQIIVNKFQNTVYDVRHRAVHHPEFPSVLTALEI
DHAVVANCLIDVRGIETILLIKSSRKAREVMQFNRPPKNCREAFTAEGDQVFERRYYSSD
YVRPKFLSKDVEAEISHLENEIENKKAQMTASRQRLFSIENEIRQNGDHLHGHRQHQKEL
QIKIRTTNAEIADLENMEEHQSVDIRTLEDEAEENKGKMESVKKDMQQQSAKMEELKNIL
QVAEKKFEEMKEKIHQVEEIAGPIKDELNQADSEVENSKRRLQHYEDKQKEHLACIKRHK
DLLAAKEKELEEKVAQARQIYPERIEVSRTVKSLDAEMNRLRERINSENDRHGNREEIVQ
QFHDAKERYEDANSKVKNLKKFIRLLEEIMTQRFKIYRQFLRLLSLRCKLYFDHLLRIRA
CSGKILFDHKNETLSITVQPREEDKATLNDVRSLSGGERSFSTVCFILSLWSITESPFRC
LDEFDVYMDMVNRRIAMDMILKVADSQHHRQFILLTPQSMSSLPTSSRIRILRMQDPERG
QRTLNFQKRNDNEEDQ
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaggaagaaagtatttcaaagcctggatccagtaaaaggcagagacaa
gaatatacagatgaacatagtgatgagtctaatgaagaagaaatttcacagttatcagca
gatagtaatctctcttcactgtcgactgcaggggaagttgggataattgaaagtatccag
ctgaagaacttcatgtgccattcgatgttggggccttttcagtttggatcaaatctcaat
tttgttgttggaaacaatggaagtggaaaaagttctgtattaactgctcttattgttgga
cttggtggaaaagccactgcaactaatagaggttcctcattaaaaatgtttgtacgagat
ggagagacttctgcagatatttcaataacattgcgaaaccaaggtagagatgcatttaaa
ccagaagtgtatggtagctctattattgtgaatcagcacattaatctggatggaagcaga
agttacagactgaaaagcaaatctgggaccttaatttcttcaaagaaagaggaacttgta
gggatactggatcactttaatatacaggtagataatcctgtgtctgttttaacccaagag
atgagtaagcactttttacagtctaaaaatgagggtgacaagtacaagttttttatgaag
gcaactcagctggaacaaatgaaagaagattattcatctattatgaaaactaaagaaaat
acatgtattcagatagaacaaggagcagagcgtcttcaagaacttaagctgctttattgt
gaaaaaaaggaccgttacaaaagcattgggtttgtgaatgagatgcgaaatcatcttgaa
gatctgaaacataaaatggcttgggcagtggtgggtgaaatggaaaaagaaatacagcca
atcagagaaggcatcagagctaaagaaggaaatacagagaagtttgttcagaagctagaa
gaatgccaggtaaaagtgaatgaagcagaagaaaagtacaaagcaatacaagacaagtta
ataacaataagtgaagaagcacaagccctgcatcctcagtgtgtatctttgaaggctgat
gtacaggcaaaaagaaaagcagtcaatgaagctgaggtactttataatcgttttgcaatt
gagttaaaacgtctgggaaaagatgatgaacagctacgtaaacgaattgaagaactgaaa
agcagtgctaatcaggtttcagagcctgaaaaattggaaagacaaaggaaaattgcccac
ttaagggaacagttaaaggcattccatgatgaagaaataatgattggtcaacaggtagat
cagtttcagcaggctatatctaagtgtaaggaagaacatactagacttaggagagaagac
tgtgatatgaaacaagcactggatgccaagcagaaacaactgagagagctgaaagatagt
aaaacaaataccttgaaaagatttggaccgcatataccagaatttcttgaagcagttgaa
acagcctataggcaagggtgctttaaacacaaacccgtaggacctttaggtgctttcatt
catccaaaagatgctgaactgaccttggctgttgaatcttgtttaaagagcctagttcag
gcattttgctgtgataatcatagtgatgaaagagctcttcagctgctaatgtcaaaatat
tatccacaaggatttagacctcaaataattgtaaataaatttcagaatacagtttatgat
gttaggcacagagcagttcatcatccagaattcccatcggttctcacagcattggagata
gatcatgcagtggttgccaattgtttgattgatgtgaggggtatagaaacaatcctgctg
attaaaagtagccgtaaagctcgtgaagtaatgcagtttaatcggcccccaaaaaattgt
agagaagcttttactgctgaaggtgatcaggtatttgaaagacgatactactcttctgat
tacgtcagacccaagttcctaagcaaagatgttgaagcagaaataagccacttggagaac
gaaattgaaaacaaaaaggcacagatgacagcatctcgccaacgtttgttttccattgaa
aatgagattaggcagaatggagatcatcttcatggtcatcgacaacaccaaaaagaacta
cagataaaaataagaacaacaaatgcagaaatagcagatcttgaaaatatggaagaacac
cagtcagtggacatccgtacattagaagatgaagcggaagaaaataagggtaagatggaa
tctgtaaaaaaagacatgcagcaacaaagcgcaaaaatggaagaactgaaaaatattctt
caggtagctgagaaaaaatttgaagaaatgaaagaaaaaattcatcaagtagaagaaatt
gctggtccaattaaggatgaattaaaccaagctgactcagaggttgaaaacagtaaacgc
cgtttgcagcactatgaagacaagcagaaagaacacttggcttgcataaaaagacataaa
gatttactagctgccaaagaaaaagaattagaggaaaaagttgcacaagctaggcaaatc
tacccagagcgcatagaggtcagcagaaccgttaagagtcttgatgcagaaatgaatcgc
ttgagagagaggataaattcagaaaatgatcgccatggaaacagagaagaaatagtacag
caatttcatgatgcaaaggaaagatatgaggatgcaaacagtaaagtaaagaatttaaag
aaatttattaggctgctggaagaaataatgacacagagattcaaaatatatcggcagttc
ttaaggctcctttctttacgatgcaaactctactttgaccatttattacgtattcgagct
tgctctggaaaaatactttttgatcacaagaatgagacactttcaataacagtccagcct
cgagaggaagacaaagctacccttaatgatgtgagatccttatcaggaggtgaacgttcc
ttctcaacagtttgtttcattctttctctgtggtccattaccgaatctcctttcagatgc
ttggatgaatttgacgtctacatggacatggttaacagaagaattgcaatggatatgatt
cttaaggtggctgactctcagcatcatcgacagttcattttgctcaccccacaaagcatg
agttctctgcctacaagttcccggattcgaatcctccgaatgcaggaccctgaaagaggc
caaaggacattgaatttccaaaaaaggaatgacaacgaggaagatcaataa
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integrated database retrieval system
