KEGG   Charadrius vociferus (killdeer): 104286725
Entry
104286725         CDS       T08577                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf04512  ECM-receptor interaction
cvf04514  Cell adhesion molecule (CAM) interaction
cvf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104286725 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    104286725 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104286725 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvf04131]
    104286725 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:cvf04090]
    104286725 (SDC1)
   00535 Proteoglycans [BR:cvf00535]
    104286725 (SDC1)
Membrane trafficking [BR:cvf04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    104286725 (SDC1)
CD molecules [BR:cvf04090]
 Proteins
  104286725 (SDC1)
Proteoglycans [BR:cvf00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   104286725 (SDC1)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 104286725
NCBI-ProteinID: XP_009883651
LinkDB
Position
Unknown
AA seq 309 aa
MRQRSDCTQPSDSQYPRKWQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSHTWRISE
EPTNSSLVVTPVDFNEQPFPGIESRTEKEVISPSATSNVVTEEPVVAVKDEVPILGSPDE
KPTNDVVTTTVRSPTTHFPSVVHVTPSEASGTVHELEPKIPSSDVPDIKDVLDPHATIHH
EGDITATHTTAAPKDVVPTHEEVSEDGSGDPGDFILTKDEDLVPTQNSEVPADSGRNAKA
AGAAGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq 930 nt   +upstreamnt  +downstreamnt
atgcggcagcggagtgactgcacacagccctcagacagccaatatccgcggaaatggcaa
actacaaatctgaaccttcctcctgaagatctcgattcatctggtgatgacgacgatgca
ttctcaggttcaggcgcaggtcccctgactgaccagtctcacacctggagaatctcagaa
gaaccaactaattcctcgttagtggtaacaccagtggatttcaatgaacagccatttcct
gggattgagagccgaactgaaaaagaagtaatatctccttctgcaactagtaatgttgtg
acagaggagccagttgtagctgtaaaggatgaagtacccatcctgggctcacctgatgaa
aaaccaacaaatgatgtggttacaacaacagtgagaagccccactactcactttccttca
gtggttcatgtaactccttcagaagcctcaggcacagtccatgagcttgaacctaaaatc
cctagctctgatgtgccagacattaaagacgtgcttgacccccacgctaccatccatcat
gagggagacatcactgccacccacacgacagcagcaccaaaggatgttgttcctacacat
gaggaggtttctgaagatggctctggagacccgggagactttatcttgactaaagatgag
gatttggtccccacccagaactcagaagtgccggctgactctgggaggaatgccaaagca
gcaggagccgcgggaattatggacagaaaagaagttcttggaggtgttattgctggagga
ctagtaggcttggtgtttgcggtgtttctagttgcatttatgctgtacagaatgaagaag
aaagacgaaggcagctattcactggatgaaccaaaacagtctaacggaggataccaaaaa
ccacacaaacaagaagaattctatgcataa

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