Charadrius vociferus (killdeer): 104286752
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Entry
104286752 CDS
T08577
Symbol
RECQL4
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvf03032
]
104286752 (RECQL4)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104286752 (RECQL4)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104286752 (RECQL4)
DNA replication proteins [BR:
cvf03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104286752 (RECQL4)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104286752 (RECQL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
F5_F8_type_C_2
zf-CCHC
zf-CCHC_5
ResIII
zf-CCHC_2
F5_F8_type_C
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
104286752
NCBI-ProteinID:
XP_009883686
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
KPHKTDIEAAPEDTRRLYKEYKMLKRRREELDLSRLSTSCQPAAQETPTAEKAQDSGWWG
AHLNRQPKTPKLSCRGRAMPKTSVQYYGMKLKSNLGAVGKETPLTPRRTPTPRRTLAVPR
LQTNSERGDKAPSPAPAEASQSQAGEPDLLLPPSVSGLAPLVLAAGLKPPPPPPNKFQRL
KQTVAQRLGSLDPAWLRRDVTAAPAQHRRCHRGSAEGAFGTAGGLKQSKEEEEEEEEHVA
AQKESGKVSDPSENLLGEFEEEEEKPKPTRRAVAARAPPQRDGNFVRLNLKKRSHVRGYA
LRGNRLRKQVWKQKWQKKAELFGGGGGGGSVDRSSDVCFRCGGTGHWASACRDRGKAPRD
EKGFSEEEEEVPLPTLEEVALRTNSVCPRLSGEVPVKILDVRRPPYEPPAPPAPMEPLYA
PGPEGKVRDTPEEVFKALKALGYSSFRPGQEVAIMRILSGLSTLVVLSTGMGKSLCYQLP
AYLYHKRSKCITLVVSPLVSLMDDQVSGLPPCLKAVCVHSNMTKGQREAVMEKVRQGEVQ
VLLLSPRALVGGSGSGFGCLPSADRLPAVAFACIDEAHCVSEWSHNFRPSYLRLCKVLRD
RLGVRCFLGLTATATLATARDVAQHLGIPAEEGIAGRSAAVPPNLRLSVSTDRDRDQALV
SLLRGERFGCLDSIIVYCTRREETARIAALIRTCLQGILLKEPVGAGEPEQDSAQRKKAK
AKKCVRRPLKWIAAAXHGGLSAATPXXXXXXXXXGGLRVVVATVAFGMGLDKSDVRGVVH
YNMPKNFESYVQEIGRAGRDGKPAHCHLFLDPEGGDLPELRRHIYGDTVDFFTIKKLVQK
VFSPCKCLELHQKHRDVIRDREVEDTEMAELLEEEEEEDGGAARQSGQRVCYKHERALPV
QQTVESLDVREEGVETLLCYLELHPRRWLELLPPTSSSCRLLCYGGSRQLRAAARSCPPV
AVFLARERLAGRDHGHASSLEFDVVSLSDSMGWEVPLVKRTLRQLQWDPQLDPSCAAAGF
RWAPVPPGELSFHLRAYGDLTDQELDSICDFLHRRVVNREKTALGQLRACFHAFQSVAFQ
TCGPHPAEEEEERSSRLKALLEDYFEKEPGGEQAACGCEEEEEEEDLSAAKLREWESQIR
ADVRHFLAIRQDEKFSGRAVARIFHGIGSPCFPAQVYGRDRRFWRKYLHFDFHRLTRLAT
EEILELEPWWRVDLGRRHAVYAVAITNRRDCCWESLLGAQIHVGDSLVDHGKRNPVCGTI
LDTGPGFTTTVCCNGLPGRYVSVIVPGREDFLVLCEVEVTAQSCLPPPG
NT seq
3928 nt
NT seq
+upstream
nt +downstream
nt
aaaccccacaaaaccgacatcgaggcggcgccggaggacaccaggcggctctacaaggag
tacaagatgctcaagcggcggagagaggagttggatctctcccggctcagcacctcctgc
caaccggcggcccaggagaccccgaccgcggagaaggcgcaggattctggttggtgggga
gcacacctgaaccggcagccgaaaacccccaagctgagctgccgcggccgcgccatgccg
aaaacctcggtgcagtactatgggatgaagctgaaatccaacctgggagctgttgggaag
gagacacccctgaccccgaggaggaccccgactcccaggaggaccctggctgtccccagg
ctgcagacaaattccgagcgcggtgacaaagccccgtccccggcaccagcagaagcttcg
cagagccaagcaggcgaaccagatcttctccttccaccctcggtgtcggggctggccccc
ctcgtcctcgctgcggggttgaagccccctcctccgccgccgaataaattccagcggctg
aagcagacggtagcgcagagactgggctcgctggatcccgcctggctgcggcgagacgtc
acggcagctcccgcgcagcaccggcggtgccaccgaggctcggccgagggagcgtttggc
accgccggcgggctgaagcagagcaaagaggaagaggaggaggaggaagagcacgtggca
gcccaaaaggagagcgggaaagtgtcggatccctcagaaaacctcctgggggagtttgag
gaggaggaggagaagcccaaacccacccgcagagctgtcgcggcaagagcacctccgcag
agagacggcaatttcgtcaggcttaacctgaagaagagatctcacgtccgaggttacgcc
ctgcggggaaatcgccttcgcaagcaggtgtggaagcagaagtggcagaagaaagcggag
ttgttcggaggaggcggtggcggcggatccgtcgaccgaagctcggatgtttgcttcagg
tgtggcgggacggggcactgggcatcggcgtgccgggaccgaggtaaggctccgagagat
gagaagggcttttccgaggaagaggaggaggttcctctgcccacgctggaagaagtggcg
ctcaggaccaacagcgtctgcccacggctctccggtgaggtccccgtgaagattttggat
gtacggagaccgccgtacgagccgcccgctccccccgcgcccatggaacccctctacgcc
ccggggccggaggggaaggtgcgagacaccccggaggaggtttttaaggctctgaaggcg
ttgggctacagctcctttcgcccaggccaggaggtggccatcatgaggatcctctcaggc
ttgtccaccctggtggttttatcgacggggatggggaaatctctctgctaccagctcccc
gcttacctctaccacaaacgttccaagtgcatcaccttagtcgtctccccgttggtgtcc
ctgatggatgaccaggtctcggggcttccgccgtgcctgaaggccgtctgcgtccactcc
aacatgaccaaaggccagcgggaagctgtgatggagaaggtgaggcagggcgaggtgcag
gtcttgctgctgtcccccagagctctggttggcggaagcggatcgggattcggttgtttg
ccttccgccgatcgcctgccggccgtggccttcgcctgcatcgacgaagctcactgcgtc
tccgagtggtcccacaatttccgtccctcttacctgcggctctgcaaggttctccgggat
cgcttgggcgtgcggtgcttcttggggttgacggcgacggccaccctggccacggcacgc
gacgtggcccaacacctcggcatcccggcggaggaaggcatagcggggcgttccgccgcc
gtgcccccgaacctgcgcctctccgtttccacggacagggacagggatcaggctctcgtc
tccctgctgcgaggggagcgtttcgggtgtttggactccatcatcgtctactgcacgcga
cgggaggagacggctcgtatcgccgcgctcatccggacctgcctccaaggaatactgctc
aaggaacccgtcggagccggggaaccggagcaggactctgcccaaagaaagaaagcgaag
gcaaagaagtgcgtccgccggccgttgaagtggatcgccgccgcctaacacggcgggcta
tccgccgccacccccgnnnnnnnnnnnnnnnnnnnnnnnnnnggcggcctccgggtggtg
gtggccactgtggctttcggcatgggtttggataaatcggacgtccgcggcgtcgtgcat
tataacatgcccaaaaatttcgagagttacgtacaggagatcggccgggccggtcgagac
ggcaaaccggctcactgccacctcttcttagacccggagggtggggatctgccggagctg
cggcgccacatttacggcgacacggtggattttttcaccatcaagaagctggtgcagaag
gttttctctccctgcaagtgcctggagctgcaccaaaaacaccgggatgtcatcagggac
cgtgaggtggaggacaccgagatggccgagcttttggaggaggaggaggaggaggatggg
ggtgcggcgaggcagagcgggcagcgggtgtgctacaaacacgagcgagctctccccgtc
caacaaacggtggaatccctggacgtccgggaggaaggcgtcgagaccctcctgtgctac
ctggagctgcacccgcgacgttggttggagctgctgcctcccacctcctcctcctgccgc
ctcttgtgctacggcggatcccggcagctccgggctgcggcgcgaagctgtccccccgtc
gccgttttcctggcccgggagcgcctggcagggagagatcacggtcacgccagttccttg
gagttcgacgtggtctcgctcagcgattccatgggttgggaagtgccgctggtgaaacgt
accctgcgccaactccagtgggatccgcagttagatccctcctgcgccgctgccgggttt
cggtgggcgccggttccaccgggggaattgtccttccacctacgcgcctacggtgacctc
accgaccaggagctggactccatctgcgacttcctccaccgaagggtggtgaaccgggag
aagacggctcttggccaactccgcgcctgcttccacgccttccagagcgtggccttccag
acctgcggtcctcaccctgcggaggaggaggaggagaggagctcccgcttgaaggctttg
ctggaggactactttgagaaggagcccggtggagagcaggctgcgtgtggctgcgaggag
gaggaggaggaggaagatctcagcgctgctaaactgcgggagtgggagagccaaatccgc
gccgacgtccgccatttcctcgccatccgccaggacgagaagttctccggcagagccgtc
gccaggatatttcacggcatcggcagcccctgttttcctgcccaagtctacggccgcgat
cgccgattctggaggaaatatctccactttgacttccaccgcctcacccgcctggccacc
gaggagatcctggagctggagccgtggtggcgcgtggacctgggtcgccggcacgccgtc
tacgccgtcgccatcaccaaccgccgtgattgctgctgggagagcctcctcggcgcccaa
atccacgtcggcgattctctggttgaccatggcaagcgtaaccccgtctgcgggaccatc
ttggacaccggtcccggcttcaccaccactgtctgctgcaacgggctgccgggtcgctac
gtctccgtcatcgtccccggccgggaggatttcctcgtcctctgcgaagtggaagtgacg
gctcagagctgcctccccccgcctggcg
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