Charadrius vociferus (killdeer): 104286934
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Entry
104286934 CDS
T08577
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvf01002
]
104286934 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104286934 (VCPIP1)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104286934 (VCPIP1)
Peptidases and inhibitors [BR:
cvf01002
]
Cysteine peptidases
Family C64
104286934 (VCPIP1)
Ubiquitin system [BR:
cvf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
104286934 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
DUF5817
Motif
Other DBs
NCBI-GeneID:
104286934
NCBI-ProteinID:
XP_009883881
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MAGFAHSPLSAPLPVVTWPGSAVRRRGPKPGVTRPGRQRGPRRPGGAGRLLPAQSASIEC
PDCGQRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVMGLSNYHCK
LLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETIGYGKDRSGSL
IYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHFEE
NLSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIILLDS
LSGMRSSGDYSATFLPGLVPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPK
LPRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFMSKHGIH
PSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLICGALSEHHVPPEWLAPG
GKLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPTKDVLVPDYNLSSLTACNWCHSNLVRR
VREDGSVSYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVY
WFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNI
DGAHAQRADDVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKAERTIQQNIADQASVM
QKRKSEKLKQEHKGQPRTASPGAVREGPSSAPATPTKTPYSPTSTKEKKIRITTNDGRQS
MLTLKCTTTFLELQESIAREFNIPPYLQCIRYGFPPKELQPPKEGMENEPVPLQHGDRIA
IEILKGKEEGRQSASAPSARAAKHEDVAVTSKISSKELQEQVDKEMYSLCLLATLMGEDV
WSYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLELCVDAAG
HFPIGPDVEELVKEALSQVRAEATSRSREASPSHGMLKLGSGGVVKKKSDQLHNITAFQG
KGHSLGTASSSQQHDQRARETPLLRKHSTETDFSPSKIEPSVFTAASGNSELIRIAPGVV
TMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSASVDLSPRKAEAVSSTA
KTGSFQAGLPESFSAPGGTEHLNTESTDGSVVNSVGTAFPARSKAQKGNSVEELEEMDSQ
DAGITNTTEPMDHS
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctttgcccactcgccactgtcagctcccttgccggtggtgacctggccaggc
agtgccgtgaggagacgggggccaaagccgggggtgacaaggcctggccggcagcgaggc
cctcggcgtccgggcggcgcgggacgcctgctgcctgcccagagcgcaagcatcgagtgc
ccggactgcgggcagcgccacgagcagcggcagctgctggccgtggaggaggtgaccgac
cccgacctggtgctgcacaacctgctgcgaaacgcgctgctgggcgtcagcggcgccggc
cctccccgcaggaacaccgagctcgtcaaagtcatgggcctctccaactaccactgcaag
ctcctggcccccatcctggcccgctacggtatggataagcaaaccggcaaagccaagctc
ctcacggagatgaaccagggagacatctttgactgctccctcttgggtgaccgcgccttc
ctcatcgagccggagcacgttgaaaccatcggttacggaaaggaccgctctggcagcctc
atctacctgcacgacaccctggaagatatcaagaaggccaacaacagtcaggagtgtctc
attcctgttcacgtggatggagatggccactgcctcgtccatgcagtctcgcgggcactt
gttggcagagaactgttctggcatgctctgcgagagaatttaaagaagcattttgaggag
aacctgagtcactacaaggcgcttttccatgattttattgatgcagcggagtgggaggac
attatcaacgaatgtgaccctttgtttgttcctccagaaggtgtgccaatgggccttagg
aatattcacatctttggtctggccaacgtgcttcaccggcctatcatcctgttagactca
ttaagtggaatgcgaagctctggagattattcagcgacgttcctccctggtctggtaccc
ctagaaaaatgcatgggaaaagatggcatgttgaacaagccaatatgcattgcatggagt
agctcaggacgtaaccattatattcctctagttggaataaaaggtgctgctttacctaaa
ctgcctaggaagctacttcctaaagcctggggagttcctcaagacctcatcaaaaagtac
atcaagttagaggaggatggtggttgtgttattggaggagacagaagtttgcaagataag
tacttgatgaggctcgttgctgcaatggaggaggttttcatgagtaaacacggtatccat
cccagtcttgtagctgacgtacatcagtatttctacagaaggactggtgtaataggagtc
cagcctgaagaagtcactgcagctgccaaaaaagcagtgatggacaaccgccttcacagg
tgcctcatctgcggcgccctttccgagcatcatgttcctccagagtggctggctcctggg
gggaaactctataacctggcaaaaagtacccatggccaactaaggcctgacaaaaattac
agttttcccctgaacagtttggtgtgttcttacaaccccacaaaggatgtgctggtacca
gactataacctgagtagtttgactgcttgtaactggtgtcatagtaacttagtgcgtcgt
gtcagagaagatggatctgtttcatatttggacggagacagaactaatactaggtctaca
ggtggcaaatgtggctgtggattcaagcactattgggaaggtaaagaatacgataatctc
cctgaagcttttcctattactctagagtggggtggaagagtggtgagagagacagtctac
tggttccagtatgaaagtgacacatctctgaacagcaatgtgtatgatgttgccatgaaa
cttgttaccaagcacttccctggtgaatttggtagtgagattcttgttcagaaggttgtc
aacacgatattgcatcaaactgccaaaaagaaccctgatgattatacccctgtaaatatc
gatggtgctcatgcccaaagagctgatgatgtacagcaaggacaagagttagagtcacaa
cttccaaccaaaattattttgactggacagaagacaaaaactttgcacaaggaggagttg
aatatgagcaaagccgaaagaactattcagcagaacattgcagaccaggcttctgtaatg
caaaaacggaaaagtgagaaattgaaacaagagcataaagggcaacctaggactgcttct
cctggggctgttcgtgaggggccatcatctgcacctgctacaccaacaaagaccccatac
tctccaacatctacaaaagaaaagaaaattcgaataaccacaaatgatgggaggcagtca
atgcttaccctaaagtgcactaccaccttcttggaactacaggaaagcatagcgagagaa
ttcaatattcctccgtatttgcaatgtattcgctatggctttcctcctaaagagcttcag
cctcccaaagaaggcatggaaaatgagcccgttcctttgcagcatggtgacaggattgcg
atagaaatcctgaaaggtaaggaggaaggcaggcagtctgcttcagcaccctctgcccgt
gccgcgaagcatgaagacgttgctgtgactagtaaaatctcatcaaaggaactgcaagag
caagtcgataaggagatgtattctctctgtcttctagcaacattaatgggagaagatgtt
tggtcttatgcaaaggggcttcctcaattgtttcagcaaggtggagtattctacagcata
atgaagaaaaccacaggtttggctgatggcaagcactgtacttttccacatctgcctggt
aaaaactttgtgtacaatgcagcagaagacagattagagttgtgtgtggatgctgctggg
cactttcctattggtcctgacgttgaagagttggttaaagaggccttaagtcaagtgcga
gcagaagctacttcaagaagcagggaagcaagtccttcacacggaatgctgaagctgggt
agtggtggagtagtgaaaaagaaatctgaccaactacataacataactgcatttcaagga
aagggccattcactaggaactgcatctagtagtcaacaacatgatcaaagagccagggaa
acaccacttttaagaaagcatagcacagaaacggacttcagtccttctaaaattgagcct
tctgtattcacagctgcctctggtaacagtgagcttatccgaattgcgccgggagttgtg
acaatgagagacagcaggcagcttgaccccactttgattgaggcacagagaaaaaagttg
caggaaatggtctcttctattcaggcttcaatggatagacatttgcgggatcagaataca
gagcagtcagcatcagttgatctatctccaagaaaagcagaggcagtgagttcaactgct
aaaactgggagctttcaggctggcttgcccgaatcgttttctgcaccaggtggtactgaa
cacttgaataccgaatcaactgatggtagtgtggtgaattctgtgggcacagcatttcct
gcaaggtctaaagcacaaaagggaaattctgttgaggagcttgaggagatggatagtcaa
gatgcaggaatcactaatacaactgagccaatggatcactcttga
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integrated database retrieval system
