Charadrius vociferus (killdeer): 104286984
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Entry
104286984 CDS
T08577
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04140
Autophagy - animal
cvf04148
Efferocytosis
cvf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104286984 (VPS16)
04148 Efferocytosis
104286984 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104286984 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104286984 (VPS16)
Membrane trafficking [BR:
cvf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104286984 (VPS16)
Hops complex
104286984 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
104286984
NCBI-ProteinID:
XP_009883933
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MASYRIRQYREQDYDAVRTLFARGILEHAPAGYRPILRFELYTMEWSLKEDLRDCLVAAA
PYGGPIALLKNNARKEKSPSARPLLEIYSASGLLLASIPVRASSLPHWLGWTQGSEDMVC
IQEDGTVLIYNLFCEFKRHFSMGNEVLQNHVLEAKVFHTEYGTGVAILTGAYRFSLTTNI
DDLKLRRMPEVPGLQKPPSCWAVLSQDRVTIVLLAVGQDLYLLDNTSCSVVTPPGMSPST
GAYLQMAVSFNYRCLALFTDTGYIWMGLATLKEKLCEFNSSIRSPPKQMVWCMRPRSRQR
AVVVAWDRQLMVAGNSTECIQFVLDEDSYLVPELDGVRILSRTSHEFLHEIPEASQEIFK
IASMAPGALLLEAQKEYEKESQKADEYLREIKDQKLLPEAVSQCIEAAGYEHEPDTQKSL
LRAASFGKCFIDKFPPESFVRMCQDLRVLNAIRDYQIGIPLTFTQYKQLTIEVLLDRLVL
RRLYPLAIRICEYLRLSEIQGVSRILAHWACYKVQQKDKSDEEVAHAINQKLGDTPGISY
SEIAARAYDCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVL
HLKNELNRGTFFMTLQNQPVALSLYRQFCKHQERETLKDLYNQDDNHQELGNFHVHSSYS
EKRIEGRVGALQNALDEYYKAKNEFAAKATEDQIKLLRLQRHLQEDFDKPYLDLSLHDTV
SNLILDGHHKRAEQLYREFKIPDKKYWWLKISALANRGDWEEMEKFSKSKKSPIGYLPFV
EISVKHHNRYEAKKYAPRVTPEQRVKAFVLVGDLDQAADAAIEHKNETEMNFVLSKCTAS
TDTAVVEKLNRARAQLLKK
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctaccgcatccggcagtaccgggagcaggactacgacgccgtgcggaccctc
tttgcccgtggcatcttggagcacgcaccggccggctaccgccccatcctgaggttcgag
ctgtacaccatggagtggagcctgaaggaggacctgcgggactgcctggtggcggctgcc
ccatacgggggacccatagctctcctgaagaacaacgcccggaaggagaagtctcccagc
gcccgcccgctgctggagatctactcggcctcagggctcctcctggccagcatcccggtg
agagcatcctcccttccccactggctggggtggacacagggcagtgaggacatggtgtgc
atccaggaggatggcacagttctcatctacaacctcttctgcgagttcaagcgccacttc
agcatgggcaacgaggtgctgcagaaccacgtgctagaggcgaaggtcttccacacagag
tatggtaccggcgtggccatcctcaccggagcatatcgcttctccctgaccaccaacatc
gatgacctgaagctgcgcaggatgcccgaggttcccggtctgcagaagcctccctcctgc
tgggctgtgctgtcccaggacagagtcaccattgtcctactggcggttggacaggacctc
tacctcctagacaacacctcctgctctgtggtgaccccccctggcatgagcccctccacc
ggtgcctatctgcagatggccgtgtccttcaactaccgctgcctggcgctcttcaccgac
accggctacatctggatgggactggccacgctgaaggagaagctctgcgaattcaacagc
agcatccgatctccacccaagcagatggtttggtgcatgcgtccccggagccggcagcgt
gccgtggtggtggcctgggaccggcagctgatggtggcggggaactccacggaatgcatc
cagtttgtcctggatgaagactcctacctggtccccgagctggatggggtccggatcttg
tctcgcacctctcacgagttcctgcacgagatcccagaggccagccaggagatcttcaag
atcgcctccatggccccaggggcactcctgctggaggcacagaaggagtacgagaaggag
agccagaaggcagacgagtacttgcgggaaatcaaggaccagaagctgctcccagaggcg
gtgagccagtgtatcgaggcagccggctacgagcacgagccggacacccagaagtcactg
ctgagggcagcctccttcgggaagtgcttcatcgacaagttccccccggagagcttcgtg
cgcatgtgccaggacctgcgggtgctcaacgccatccgggactaccagatcggcatccca
ctcaccttcacccaatacaagcagctcaccatcgaggtcctgctggacaggctggtcctg
cggcgcctctacccgctggccatcaggatctgcgagtacctgcgcctctcagagatccag
ggtgtcagccgcatcctggcccactgggcctgctacaaggtgcagcagaaggacaagtct
gatgaggaggtggcccatgccatcaaccagaagctgggtgacacaccaggcatctcctac
tccgagattgctgcccgggcttatgactgcggcaggacagagctggccatcaagctgctg
gagtatgagccacgctccggagagcaggttccactgctgctgaagatgaagcggagcaag
ctggccctcagcaaagccatcgagagcggggacaccgatctggtctacactgttgtgctc
cacctgaagaatgagctgaatcgtggcaccttcttcatgacgctgcagaaccagccggtg
gccctgagcctgtaccgccagttctgcaagcaccaggagcgggagacactgaaggacctg
tacaaccaggatgacaatcaccaggaactcggcaacttccacgtccactccagctactcg
gagaagcgcattgaagggcgagtaggagctctgcagaacgccctggatgagtactacaaa
gccaagaatgagtttgctgccaaggccacagaggatcagatcaagctcctgcggcttcag
cgacacctccaggaggactttgacaagccctatcttgatctctcactgcacgacacagtc
tccaacctcatcctggatggccaccacaagcgagccgagcagctctaccgggagttcaag
atccctgacaagaagtactggtggctgaaaatcagtgccctggccaaccgcggtgactgg
gaggagatggagaagttctccaagagcaagaaatcacccattgggtacctgccctttgtg
gagatctccgtgaagcaccacaaccgctatgaggccaagaagtacgcgccccgcgtgact
cctgagcagcgtgtcaaggccttcgtcctggtgggggacctggaccaggcagccgatgct
gccatcgagcacaagaacgagacggagatgaacttcgtcctgtccaagtgcactgccagc
accgacactgccgtggtagagaagctgaaccgggcccgagcccagctcttgaagaagtga
DBGET
integrated database retrieval system
