Charadrius vociferus (killdeer): 104287101
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Entry
104287101 CDS
T08577
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104287101 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104287101 (MYO5C)
04131 Membrane trafficking [BR:
cvf04131
]
104287101 (MYO5C)
03029 Mitochondrial biogenesis [BR:
cvf03029
]
104287101 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104287101 (MYO5C)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104287101 (MYO5C)
mRNA cycle factors
P-body specific factors
104287101 (MYO5C)
Membrane trafficking [BR:
cvf04131
]
Others
Actin-binding proteins
Myosins
104287101 (MYO5C)
Mitochondrial biogenesis [BR:
cvf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104287101 (MYO5C)
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104287101 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
DUF489
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
104287101
NCBI-ProteinID:
XP_009884067
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MEDLKLYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHVQLEDGTELNYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTGMGGSTVIEGVDDR
ANMVETQKTFALLGLKRDFQMDVFKMLAAILHLGNVEITAVGDERSSISLEDKHLNIFCE
LLDLNCDKMAQWLCHRKIITTSETVIKPMTRTQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKYEGFLEKNRDTVHEVLIEVLKESKFHLCANFFQDNPVSISPF
SSTINIKSARPVLKSLNKQLRMTVGNKFRSSLSLLMATLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIMIQKSVRGWLQRKKFLRVK
QATIIIQQYFRGQRTVRQAITARTLKQTWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQRKIEE
QSRENHGLLERLTSLASTHMNDMDTIQKLELDLEKLTAQKRTYEEKGKKYKEDSEQKILK
LENLNKELQEQKETLEIKLQEKTEEMKEKMDDLTKQLFNDVQKEENQRMMLEKNFQNQKQ
DYEKEIEMLKGEIKVLKEEKTQLQHQIQQEIVIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKRQVSELENQKLDLENRLQEQTVKLKGKMKEMSNRLHYELEGDRTQ
RRTNEAQNEIDIKEKERLKVTTQGIEGLSNGVMQDEIQDEVKSKIKQETTRLTVENMDLE
EKLDMKDRIIKKLEDQIKTLTRTIEKSKILHNSHVPTLSKEYIGMMEYKKEDEERIIQNL
ILELKPRGVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDF
EMLSFWLSNTYYFLNCLKQYSGEEEFMKCNTPQQNKNCLKHFDLSEYRQILSDLAIRIYH
QFIIVMENNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYF
YSTMCQNGLDSELLKQAVKQLFFLIGAITLNSLFLRKDMCSCRKGMQIRCNISYLEEWLK
DKNLQSSNVKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDD
FEKRVTPSFVRKVQAMLNNREDVPQLMLDTKYLFQVTFPFTPSPHALEMIQVPSSFKLGF
LTRV
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttgaaactctacacccagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcggaaatcacaaaaaactacaaagctggagaccgttttctccatgtg
cagttagaagatggaactgaacttaattaccctgttgatccagctgctttgccaccccta
cgaaatcctgacatacttgttggtgaaaatgatctcactgcacttagttatctccatgaa
ccagctgttctacacaatcttaaagttcgttttgtggagtctaagcttatctacacctat
agtggaatcattttggttgcaataaatccctataaacagttgccaatatatggagatgcc
attatccatgcatatagtgggcaaaacatgggggacatggatccacatatatttgctgtg
gcagaagaagcgtacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaagatacactatgagatactttgccact
gtgagtaagtcaagcagcaatgctcatgtggaggataaagtattggcatccaatccaata
accgaggctgtcggcaatgcaaaaaccacaaggaatgataatagcagtcgatttggaaaa
tacactgaaatcagttttgatcagagttaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtctttcagtcagagaatgagagaaactaccatatattt
tatcagttgtgtgcatctgctatgcagcctgaatttaagcatcttaaattgggaagcgca
gaagaatttaactacacaggaatgggtggcagcacagtaatagaaggagttgatgacaga
gcaaatatggtggagactcagaagacgtttgccttactgggtctgaagagggattttcag
atggatgtttttaaaatgctggcagcaatcctacacttaggcaacgtggaaataacagct
gttggagatgaaaggtcatccatcagtctggaagataaacatctcaatatattctgtgaa
cttttggatttaaactgtgacaaaatggcacaatggctgtgccaccgaaagattatcact
acctcagagactgtaataaagccaatgacaagaactcaggctgttaatgcgagggatgct
ctggcaaagaagatctattctcatttatttgactttattgtggaaagaatcaaccaagct
ttgcagttccctggcaaacaacatacttttattggtgttttggacatttatggctttgaa
acgtttgatgtgaatagttttgaacaattttgcatcaattatgctaatgaaaaactgcag
cagcaattcaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttctatgacaaccagcccgtcattgaccttattgaagctaaa
atgggcattttagaacttctggatgaagagtgcttgttacctcatggaacagatgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaatgcgctctttgaaaagccgagg
atgtcaaacacatctttcatcattcaacactttgctgataaggtagaatataaatatgaa
ggctttctggaaaaaaacagagatacagtacatgaagtattgattgaagtcttgaaagag
agcaagtttcatctgtgtgcaaatttttttcaagacaatccagtgtccatttcacctttc
agttcaactataaacatcaaatctgcaagacctgttctcaagtcacttaacaaacagctc
cgaatgactgttggcaataagttccggagttctttgtctttactgatggcgacacttaat
gcaaccacccctcattatgtacgatgcataaagccaaatgatgagaagttgccttttgag
tttgattcaaaaagagtggctcagcaactgcgagcatgtggtgttttggaaactattcgg
attagtgcacagagttacccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggaactctccataaacgataagaagcagatttgcaagattgtt
ttgcaacggctaatccaggatcataaccaatatcagtttgggagaacaaaaattttcttc
agagcaggacaggttgcttacttagaaaaactgcgttcggataaactgagacacgcatgc
atcatgatccaaaagagtgttcgaggctggctgcagcggaagaaattccttcgcgtaaaa
caagcaactattataatacagcagtatttccgggggcagcggactgtacggcaagctata
actgcaagaactctgaagcaaacgtgggcagctataattattcagaaatactgtcggggt
tacctggtccgtagactctgccagctcatccatgtggctgctgtaacaattcaagcttat
acaagaggatttctagcaagaaaaaaatatcggaagatgcttgaagaacacaaggctgtg
atccttcagaaatatgcccgtgcatggcttgctaggcgcagatttcagaatattcggcgg
tttgtattgaatatccagctttcatacagagttcagcaactgcagagaaagatagaagag
cagagtagagaaaatcatggtttgctggaacgattgaccagtcttgcttcaactcatatg
aatgacatggatacaattcaaaaacttgaattagatcttgaaaagttaactgctcaaaag
agaacatatgaagagaaagggaaaaaatataaagaggacagtgaacagaaaatcttaaaa
cttgagaatctgaataaagaattacaagaacagaaagagaccttagaaataaagcttcaa
gaaaaaactgaggaaatgaaagagaaaatggatgacctcacgaagcaactcttcaatgat
gtacaaaaagaagaaaatcagagaatgatgcttgagaaaaatttccaaaatcagaagcaa
gactatgaaaaggagattgaaatgctaaagggagaaattaaggttctgaaagaagaaaaa
actcagctacaacatcaaattcagcaagaaattgttattcaggatggcttgaaaatggaa
gtaggacaacttacaaaacaagcacagaaaatacctgagttgcaaaaggaaattgaactg
ttgcagacacaaaaattggatgttgaaaagcaggcccattcacaaaagcgagaactgagg
gaaaagatgtcagaagttacaaaacagcttcttgaaagttatgattttgaagatgtaaga
agcagactctctacggaggatttggaacacttaaatgaggatggagaactgtggtttgct
tatgagggcttgaaaaaagctaccagagtattggaaagtcattttcagtctcagaaagaa
atatatgaaaaggagattgaaggtttgaactttaaagttgaacatcttagccaagatatt
aatcatctacaaaaattatttcgagaggaaaatgacataaatgatggtattcgacttgaa
gttagcaggctaacttcagaaaacctggtaatcccagatcttaaacgacaagtttctgaa
cttgaaaatcaaaaattagatcttgaaaaccgacttcaagaacagactgtaaagctgaaa
ggaaaaatgaaagagatgtctaatcggctgcattatgagctagaaggggatagaacacaa
agacgaacaaatgaggcccagaatgaaatagacataaaagaaaaagagagactgaaagtc
acaacccaaggaattgaggggctgagcaatggtgtgatgcaagatgaaatccaggatgaa
gtaaaaagcaagataaagcaagaaacaactcgacttactgtggaaaacatggatcttgaa
gaaaaactagacatgaaagatagaataataaagaaattggaggatcagatcaaaactctt
accaggactattgaaaaaagtaagatattacataattctcatgtgccaactttgtccaaa
gagtacattggaatgatggagtacaaaaaagaggacgaagaaaggatcattcaaaatctg
atcctcgagttaaagccacggggagttgtagtaaatatgatacctggccttccagctcac
atcctattcatgtgtgtgaggtatgcggattatctgaatgatgctgacatgctgaaatct
ttcatgaatgtaacgattgatggtatcaaacaagttgttaaggagcattcagaagacttt
gagatgttgtccttttggctttccaatacgtattattttcttaactgtttgaagcagtac
agcggggaggaggaatttatgaagtgtaacactccacaacagaataagaactgtttgaag
cattttgatctctcagaatacagacaaattcttagtgatttggccattcgtatctatcac
caattcattattgtaatggagaacaacattcagcccatgatcgtaccaggcatgctggaa
tatgagagtcttcagggaatttctggcttgaaacctacagggttccgtaaacgttcttct
agtatagacgacacagatacctacacaatgacctctatcctgcaacagctcagctatttt
tatagtactatgtgccagaacggcttggactctgagcttctaaagcaggcagtgaagcag
cttttctttctgattggagctatcaccctcaatagtctcttcctccgcaaggacatgtgc
tcttgtagaaaaggaatgcagataagatgtaatatcagctacttggaagaatggctaaag
gacaagaatcttcaaagcagcaatgtcaaagaaactttggagcctctgtctcaagcagcc
tggctccttcaggtcaaaaagatcacagatgatgatgccaaggaaatatgtgaacactgc
acatctctttctactgtgcagatagttaagatcctaaactcatacactccaatagatgat
tttgagaaaagagtgactccatcatttgttcgtaaagtccaggctatgctaaacaatcgt
gaggatgttccacagttgatgctcgataccaaatatctctttcaagtgacgtttcctttc
accccttctccacatgccttggaaatgatacaagtccccagcagcttcaaacttggcttt
ctcacaagggtttaa
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integrated database retrieval system
