Charadrius vociferus (killdeer): 104287102
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Entry
104287102 CDS
T08577
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104287102 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104287102 (MYO5A)
04131 Membrane trafficking [BR:
cvf04131
]
104287102 (MYO5A)
03029 Mitochondrial biogenesis [BR:
cvf03029
]
104287102 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104287102 (MYO5A)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104287102 (MYO5A)
mRNA cycle factors
P-body specific factors
104287102 (MYO5A)
Membrane trafficking [BR:
cvf04131
]
Others
Actin-binding proteins
Myosins
104287102 (MYO5A)
Mitochondrial biogenesis [BR:
cvf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104287102 (MYO5A)
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104287102 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
HTH_17
AAA_16
Myosin_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
104287102
NCBI-ProteinID:
XP_009884068
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MGCVSSSCLYQPYVSDEDRKESSGYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEG
KDLEYCLDPKTKELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGI
VLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGES
GAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIE
IGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYF
HYTKQGGSPVIDGVNDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDS
DSCTVPPKHEPLTIFCDLMGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAK
HIYANLFNWIVDHVNKALHATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQF
NMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQ
KLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKK
FKLLPELFQDEEKVLSPTSATPSGRVPLSRTAVKPAKARPGQASKEHKKTVGHQFRNSLH
LLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQ
EFFSRYRVLMKQRDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRAD
KLRAACIRIQKTIRGWLMRKKYVRMRKAAITIQRYVRGYQARCYAKFLRRTRAAITIQKF
QRMYVVRKRYQCMRAATIALQALLRGYMARNKYQMMLREHKSIIIQKHIRGWLARVHYRR
TLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYK
SLLEKLSNLEITYSTETEKLRSDVERLRTSEEEAKNATNRVLSLQEEIAKLRKELHQTQS
EKKTIEEWADKYKHETEQLVSELKEQNXXXXXXXXXXXIHDQAKEITETMEKKLVEETKQ
LELDLNDERLRYQNLLNEFSRLEERYDDLKDEMNLMVNIPKPGHKRTDSTHSSNESEYTF
SSEITEAEDLPVRMEEPSEKKAPLDMSLFLKLQKRVTELEQEKQSLQDELDRKEEQALRA
KAKEEERPPIRGAELEYESLKRQELESENKKLKNELNELQKALTETRSPEVTAPGAPAYR
VLLDQLTSVSEELEVRKEEVLILRSQLVSQKEAIQPKEDKNTMTDSTILLEDVQKMKDKG
EIAQAYIGLKETNRLLESQLQSQKKSHENELESLRGEIQGLKEENNRQQQLLAQNLQLPP
EARIEASLQHEITRLTNENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISP
GQIIDEPIRPVNIPRKEKDFQGMLEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYIL
FMCVRHADYLNDDQKVRSLLTSTINGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSG
EEGFMKHNTPRQNEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHE
TIQGVSGVKPTGLRKRTSSIADEGTYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMF
YIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQL
LQVKKKTDEDAEAICSMCNALTTAQIVKVLNLYTPVNEFEERVLVSFIRTIQLRLRDRKD
SPQLLMDAKHIFPVTFPFNPSSLALETIQIPASLGLGFISRV
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcgtgtcctcctcctgcctctaccagccgtacgtctccgacgaggataggaag
gagtcatcagggtatgccagggtttggatccctgatccagaggaggtctggaagtcggca
gaacttctcaaagattataaacctggagataaagttctccaacttcgacttgaagagggc
aaggacctagaatattgcctagatccgaagaccaaggaactcccgcccttgcgaaaccct
gacatactcgttggtgaaaatgacctcacagcgctcagttatctccacgaaccggctgtt
ttacacaaccttaaagttcgatttatagactctaaactaatctatacctattgtggtatc
gtcttagtggccataaatccgtatgagcaactgcctatctatggcgaagatatcatcaat
gcgtacagtggccaaaatatgggggatatggatccacatatctttgcggtggctgaagaa
gcatacaagcagatggccagagatgagcgaaatcagtccatcattgtcagtggggaatct
ggagccgggaagactgtctctgctaagtatgccatgaggtactttgccactgtcagtgga
tctgctagtgaagccaatgttgaggagaaagtcttggcctccaaccccatcatggagtct
attggaaatgccaaaactacaaggaatgacaacagcagtcgctttgggaaatacattgaa
attggttttgataagaggtatcggatcattggtgctaacatgagaacttacctcttggaa
aaatcaagagtggtgtttcaggcagaagaggagagaaattaccacatcttttaccaacta
tgtgcctctgcagcattacctgagtttaaaactctacgattagggaatgcaaattacttt
cactatacgaagcaaggtggaagccctgtgattgatggtgtcaatgatgctaaggaaatg
gtaaacaccaggcaggcctgcactttgctagggattagtgattcctaccagatgggaatt
tttcgaatccttgctggcatccttcacttgggcaatgtggagtttgcatctcgggattct
gacagctgcactgttcctcccaagcatgaacccctcaccatcttctgtgacctcatgggg
gtggagtatgaagagatggcccactggctttgccataggaagctcgcaactgccaccgaa
acctacatcaagccaatttctaaacttcatgccatcaatgccagagatgcacttgccaaa
catatctatgctaatctctttaactggattgtagatcatgtgaacaaagcccttcacgct
actgtgaaacagcattctttcattggagtgttggacatttatggatttgagacattcgaa
atcaacagctttgaacagttctgcatcaactatgccaatgaaaaactgcagcagcagttc
aatatgcatgtctttaagctggaacaagaagaatatatgaaggaacaaataccatggacc
ttgattgatttttacgacaatcagccatgcatcaacctcatagaggccaaaatgggagtt
ctggatctgttggatgaggagtgcaagatgccaaaaggctcggatgacacttgggcccaa
aaactgtacaatactcatttgaataaatgtgccctctttgaaaaaccgcgtttgtcaaat
aaggcttttatcatcaagcactttgctgacaaggtggaatatcaatgtgaaggctttttg
gaaaagaataaagacacagtttatgaagaacaaattaaggtcctaaaatcaagtaagaaa
tttaagctgttaccagagttattccaggatgaggagaaggtcctcagccccacgtcagca
accccttcagggcgcgtgcctttgtctcgaacagctgtaaaaccagccaaggccaggcca
ggccaggccagcaaggagcataagaaaactgtgggacatcagtttcgaaactctcttcat
ctgctgatggaaaccctgaacgctacaactccacactacgtgcgctgtattaagcctaac
gacttcaagtttccgttcacattcgatgaaaagcgggcagtgcagcagctgagagcttgt
ggtgtcctggagaccatccgaatcagtgcagctggcttcccctccaggtggacgtaccaa
gagttcttcagccgttaccgtgttctgatgaagcagagagatgtccttagtgaccgaaag
cagacatgtaaaaacgtcctggagaagttgattctggacaaggataagtaccagtttggt
aagacaaaaatatttttccgggctggtcaagtagcctatctggaaaaaataagggcagat
aagttgagagctgcctgtatccgcatccaaaagacgatccgaggctggctgatgcgaaag
aagtacgtgcgtatgaggaaggctgccatcaccattcagagatatgtcagagggtaccaa
gcacgatgctatgccaagttcctgcggagaacacgggctgccatcactattcagaagttc
caacgcatgtatgtggtccgcaaaagataccaatgcatgcgagctgctactattgctctt
caggctctcttaagaggttacatggccaggaacaagtaccaaatgatgcttcgggagcac
aagtctattattattcagaaacatataagaggctggttggctcgagtgcactaccgtagg
accttgaaggcaattgtttacttgcaatgctgttaccggcgcatgatggccaagagggag
ctaaagaaactgaagatagaggcccggtctgtagaacgctacaagaagcttcatattggc
ttggagaacaagatcatgcagctgcagcgaaaaattgatgagcagaacaaagagtacaaa
tctctgctggagaagctgagcaacctggagatcacatacagtacggagacagaaaagctg
cggagtgatgtggaaaggcttcggacaagtgaggaagaggctaagaacgcaaccaaccgt
gtcctcagccttcaggaggagattgccaagctccggaaggagctgcaccaaactcagtct
gagaagaagaccattgaggaatgggcagacaaatacaaacatgaaactgagcagctggta
tcggagctgaaggagcagaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatccat
gaccaggcaaaggaaataacagagacaatggaaaagaaattagtggaggaaacgaaacaa
ctagagctagatctgaatgatgaacgattacggtatcagaacctgctgaatgagttcagc
cgtttagaggagcgttatgatgatctcaaggatgaaatgaacttaatggtgaacatcccc
aagcctggacacaaaagaacggattcaactcacagtagcaatgaatctgaatatactttt
agctctgagatcacagaagcggaggacttaccagtgaggatggaggaaccaagtgagaaa
aaggcaccgttggatatgtctctgttcctcaagctgcagaaacgggttacggagctggag
caagaaaagcaatccctgcaggatgaactggacagaaaggaagaacaggctctccgtgct
aaagctaaggaggaggaaaggcctccaataagaggtgcagagttggagtatgagtcgctc
aagcgtcaagagcttgaatctgagaataagaagctgaagaatgagttgaatgagctgcag
aaggccctcacagaaacgcgatctccagaggtaactgctcctggtgcccctgcatataga
gtcctcctggatcagctgacttcagtaagtgaagagcttgaagtgcgcaaggaagaagtc
ctcatcctgaggtctcagcttgtaagccagaaagaagcaattcaacccaaggaggataag
aataccatgacagattcaacaatcctcttggaggatgtacaaaagatgaaagacaaagga
gaaatagcacaggcatatattggactgaaggaaacaaacaggctgctggagtctcagctt
cagtcgcagaagaagagccacgagaacgaactggaatcgctgcgaggtgagatccaaggt
ctgaaggaagaaaacaatcgccagcagcagctcctagcgcagaatctgcagctgcctcca
gaggcccgcattgaagccagtctacagcatgagatcacccggctgactaacgagaacttg
gatttaatggagcagcttgaaaagcaagacaaaactgttcgcaagttaaagaaacagttg
aaagtatttgctaagaagatcggtgaacttgaagtgggccagatggagaacatatcacct
ggacaaatcattgatgaacctattcgtccagttaacattccacggaaagaaaaggacttc
caagggatgttagaatataagaaggaggatgaacaaaaacttgtcaagaatcttatttta
gagctgaaaccacgtggggtagctgtcaacctgattccaggactaccagcatatattttg
ttcatgtgtgtacgtcatgcggattaccttaatgatgaccaaaaagtgcggtcgttgttg
acttccactatcaatggcatcaaaaaagtgttgaagaaaagaggtgatgacttcgaaaca
gtgtccttctggctatctaacacctgccgatttttgcattgcttgaagcaatatagtgga
gaagaggggtttatgaagcataatacacctcgtcaaaatgaacactgcctcactaatttt
gatttagctgaatacagacaagtactgagtgatttggctattcagatctaccaacaactt
gtccgagtgttggaaaacattctgcaaccaatgattgtttcaggaatgctggagcatgag
actatccaaggtgtctcaggggtgaaaccaacagggctgcggaagagaacatccagcatt
gctgacgaaggaacctacactttggactccattattcgtcagctgaactctttccattca
gtgatgtgtcagcacggaatggatccagagctgatcaaacaggttgtcaagcagatgttc
tacatcattggggctgtaacgcttaataatcttctcctgcgcaaggacatgtgctcgtgg
agcaaaggaatgcagataagatacaacgtgagtcaactggaagaatggctacgtgataaa
aatttgatgaatagtggcgctaaagaaacactggaacccctcatccaggctgcacagttg
ttgcaagtaaaaaagaaaacggatgaagatgcagaagccatttgttcgatgtgcaatgca
ctgactactgcccagattgtaaaagttctgaatttgtatactccagttaatgagtttgaa
gagagagtcttggtatcatttatacgtacaatacagctgcgtctgcgagacaggaaggac
tctcctcagttgctcatggatgctaaacacatctttcctgttacttttccatttaatcca
tcctctctggcattagaaaccattcagatcccagccagcttgggcctgggcttcatatca
cgtgtctga
DBGET
integrated database retrieval system
