Charadrius vociferus (killdeer): 104287136
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Entry
104287136 CDS
T08577
Symbol
WRN
Name
(RefSeq) LOW QUALITY PROTEIN: Werner syndrome ATP-dependent helicase
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvf03032
]
104287136 (WRN)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104287136 (WRN)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104287136 (WRN)
DNA replication proteins [BR:
cvf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104287136 (WRN)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104287136 (WRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
NPV_P10
SAM_GIDA_C
Motif
Other DBs
NCBI-GeneID:
104287136
NCBI-ProteinID:
XP_009884104
LinkDB
All DBs
Position
Unknown
AA seq
1494 aa
AA seq
DB search
MPWEXAASACNRNVEKMNKMDLLTTNLQNKYPQWMLKQNQEGVLGDKKKPIVQRSVLEDG
LPFLEFCGSVVYSYEASDCSLLSEDIRQSLSDGAAVGFDIEWPPSYTKGKMAKIAVIQIC
VTEEKCYLFHISSMAGFPKGLKRLLEDETIKKVGVGIEGDQWKLMSDFEIKLKSFVELAD
VANEKLKCKEIWSLNGLVKHLFGKQLLKDKSVRCSNWEEFPLNEEQKLYAATDAYAGFIV
YQKLQNMTNRDQKLCFVRRDDMSEGVKERLTSLAEEITDLASRIPDSSGQLENLQRAAEI
LTDITANVKALRSTLFGSGSPCVLERSCGATPTNLEAKSANVEAQKVKTPEFAKQLEGDF
SICSDATLAGLWEGDGNEEEAERRNTVVEDGAAAASSKDVADRDDFMSLDITEQELQILE
RQAEKELLNEAVPEGACSTDNEQNISCVIESDEELEMEMLKSVEDVDDFEGVLTERESNK
ARKTPDTELNVALDDEDEGIEEVEEECLDPLLPVPSESHIACLKTHFGHSSFKPVQWKVI
NSVIEDRRDNLVVMATGYGKSLCYQFPPVYTGFTGIVICPLISLMEDQVLQLTMSEIPAC
LLGSAQSKNIKECVKAGQYRVIYMTPEFCLGNLQLLQDLDQTVGITLIAVDEAHCISEWG
HDFRNSFRGLSSLKKILPSVPVVALTATASPSIREDIVNCLNLKNPQVTCTSFDRPNLYL
EVGRQSGNILRDLKQFLTRKGSSSAYEFEGPTIIYCPSRKATEQVVSELIKLGVACGAYH
AGMGIKQRRDTHHQFMRDEIQCVVATVAFGMGINKADIRMVIHYGAPKEMEAYYQEIGRA
GRDGLPASCHVLWTVADLAFNRHLLSEIRNEKFRLYKLKMLAKIEKYLVSNSCRRKIILS
HFEDKQLRKVSSGIMGTEECCDNCRSRASCFVVSSDSEGGLQDFGKQAYQLLSAVSALEE
KFGTRIPILFLRGSSSQRLPDRYRRHPLFGSGKDWPENWWKLLCQQLIMEGFLKEASGHN
KFATICMLTQKGRNWLLKAASASNPSLLLQSSEDLNLQRRPRSSRPLPVLSTQRSPETKG
TTQSPVKQMSLYDMFSYDRKGKTPPRNNNVLKSVAECSPVKSSPLKPSELVVSSREKELE
TALYGKLLSARQKVANEKVIPPAVLATNKILLEMARIRPTNVENVKRIDGVSEAKSTMLV
PLLAEIKDFCQVNGLQTDIFPTPGSKDQKEASPWKCTRALSPSEHVTYVLFQEKNLSVRT
ISESRSLPVSEVGIHLFQAMKAGYPVNLERAGLTPEVQQVISGVIRNPPIDSDTTKIQAI
RKLVPANIELYLIKMTIALLEKKDRNKSQDGSGVKRMLVWSEGQQEKTGADQASRENAMW
SKTEGNLISPTLKEGAEKSHLQVEPLTSAARSVDDGQPASRGAAGCLKPIALASWNQPAL
NPDEEELFADSQPKSSHLPCKRKVPEWFGTSAVPVLPLTQIKKSKAETRKGIFS
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgccctgggaataggctgcctctgcttgtaacagaaatgtggaaaagatgaataaaatg
gatttgctgactactaatctgcagaataaatatccgcagtggatgctcaaacaaaaccaa
gagggagttttgggtgataaaaagaagcctatcgttcagaggagtgttttggaagacggg
ctgccattcctagagttctgcggctctgtcgtttacagctacgaagccagtgactgttcc
cttctctcagaagatatcaggcagagtttatcagatggggctgctgttggatttgatatt
gaatggccaccatcgtatactaaaggaaaaatggcgaaaatagctgtaatccagatatgt
gtaactgaggagaagtgttatttgttccacatctcttcgatggcaggttttcccaaggga
ctcaaaagactactcgaagatgaaacaattaaaaaggttggcgtaggaattgagggagat
caatggaagctgatgagtgactttgaaatcaaactgaagagctttgtggagctggctgac
gttgctaacgagaaactgaagtgtaaggagatatggagtctaaatggtctggtcaaacac
ctttttggtaagcagctcttgaaggataagtctgtccgctgtagtaactgggaagagttt
ccactcaacgaggagcaaaaattgtatgcagccactgatgcctatgctggcttcatcgtt
tatcaaaaactgcaaaatatgactaacagagaccagaaattatgttttgtaagaagagat
gacatgtcggagggtgtgaaggagcgcttgacttcactagcggaagagataacggacctg
gcttctcgcatccctgactcttctgggcaacttgaaaacttgcagagggctgcagaaata
ctgactgacattacagcgaatgtaaaagccctaagaagcacgctgtttggttcaggttcc
ccttgtgtactggagaggagctgtggcgcaactccaacaaatcttgaagcaaagtcagca
aatgttgaagcacagaaagttaaaacgcctgaatttgctaaacaacttgaaggtgacttc
agtatctgctctgacgctacactagctggcctctgggagggagatggtaatgaagaagag
gcagagagacgtaacactgttgtggaagatggggctgcagcagccagctctaaggacgta
gcagacagagatgatttcatgtcactagacattactgagcaagaacttcagatcttagaa
cgtcaggctgaaaaagaattgctcaatgaagctgtacctgagggggcatgctccacagac
aatgaacaaaatatttcctgtgtcattgaaagtgatgaagaactggaaatggagatgctt
aaatctgtagaagatgtagatgattttgaaggagttctaactgaaagagagtccaataaa
gccaggaaaactcccgacacagaattgaacgttgcactagatgatgaagatgaaggcatt
gaggaagtagaggaggaatgtttggatccattgctaccagtacctagtgaaagccacatc
gcatgtctgaagacgcattttgggcattcttctttcaaaccggtccagtggaaagtgatc
aattctgttatagaagacagaagagataatcttgttgtcatggcaactggctatggaaaa
agcttgtgctaccagtttcctcctgtttacactggatttacaggaattgtcatctgtcct
cttatctccttgatggaggaccaggtgctgcagctgacgatgtcagagattccggcttgc
ttgcttggttcggctcagtcgaaaaacatcaaagaatgtgtcaaagcgggtcaatacaga
gtcatctatatgactccagagttctgtttggggaacttacagttacttcaggatcttgac
caaactgttggtattactctcatagctgttgatgaagctcattgcatttctgagtggggc
catgacttcagaaattcctttagaggtctaagctcattaaagaagattctgccatcggtt
cccgttgttgctttaactgcaaccgcaagtccatcgattagagaagacatagtgaattgt
ctgaacctgaagaatccccaagtcacgtgtactagttttgacagacctaacctgtactta
gaagttggacgacaaagtggaaatatccttagggatttgaagcagttccttactaggaaa
ggaagcagttctgcgtatgagtttgaaggccccactatcatctactgcccttcaagaaag
gccactgaacaggttgtgtccgaattgattaaacttggtgtggcctgtggtgcgtaccat
gcaggcatgggaatcaaacaaaggagagacacccatcaccagttcatgagggacgaaatt
cagtgtgtagtggctacagtggcgttcggaatgggcatcaataaagcagatatccggatg
gttattcattacggtgcccctaaggaaatggaagcctattatcaagaaattgggagagct
ggtcgcgatgggcttcctgcttcttgtcacgtcttgtggactgtagcagacttggctttt
aacagacatcttctaagtgagatacgcaatgaaaagttccggttgtacaaactgaagatg
ttggctaaaatagagaagtacctcgtgtcaaacagctgcaggaggaaaatcatcctgtct
cattttgaagacaaacaactccgaaaggtttcctctggcatcatgggcacagaagaatgc
tgtgataattgcaggtccagagcctcttgttttgtggtctccagtgactcggaaggtggt
ttacaggactttgggaagcaagcgtatcagctgctgtctgcagtgagtgccctggaagag
aagtttggcactagaattcccattctgtttctccgagggtctagttctcaacgcttgcct
gacagataccgaagacaccctctctttggtagtggaaaagactggccggagaactggtgg
aagttgctgtgccaacagttgataatggaagggttcctcaaggaagcctctgggcataac
aagtttgcgaccatatgcatgcttacccaaaagggtaggaattggctgttaaaagctgca
tctgcctcaaatccaagtcttctattacagtccagcgaagaccttaatttacagagacgt
cctagaagcagtagacctttacctgtgctctcaacgcagcggtccccagagacgaaagga
accacgcagtcaccggtcaagcagatgtctctgtatgatatgttttcgtatgacagaaaa
ggtaaaactcctccgagaaacaataacgtgcttaagagtgttgcggagtgctcaccagtg
aaatcatctcctttgaagccctcagaacttgttgtttcatcccgagaaaaagaactagag
actgctctgtatggcaagctgctgtctgctagacagaaggtagctaatgagaaggtaatt
cctcctgctgtcttggcaaccaataagatcctgctggagatggcccgaataaggcctacg
aatgttgagaacgtgaagagaattgatggtgtatctgaagcaaaatccaccatgttggtc
cctctcctggctgaaattaaggacttctgccaagtgaatggtttgcagactgacatattc
cccacacctggatctaaagaccaaaaagaagcatctccctggaagtgtactagagctctc
tctccctcagagcacgtcacgtatgttctgttccaagagaaaaatctctctgtgaggact
ataagtgagagcagatctctgcctgtttctgaggttggcattcacctgttccaggcgatg
aaagctggctaccctgtcaacctggagcgagcaggtttgactcctgaagttcaacaggtc
atttctggtgttatccgtaatcctcccattgactcagacacgaccaaaattcaggcaatc
agaaaacttgttcctgcaaatattgaactgtatctcatcaagatgactattgcattattg
gagaaaaaggatagaaataagtctcaggatggctcaggtgtcaaaaggatgttggtgtgg
tcagaagggcagcaggaaaaaacaggagcagatcaagcaagcagggaaaatgccatgtgg
agtaaaacagagggcaatttgatcagtccgacattgaaggaaggagcagagaaatcccat
ttgcaagtggagcctttgacttcggctgcacggagcgtggatgatggccagccagccagc
agaggggcagcaggctgcctgaagcccattgcactggcctcctggaatcagcctgccctc
aatcccgatgaggaggaactgtttgccgactctcagccaaagagttcgcatttgccttgt
aagaggaaggtgccagagtggtttggaacctcagctgtgcccgttctacctctaacccag
atcaagaaatccaaagcggagaccagaaaagggatttttagttga
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integrated database retrieval system
