KEGG   Charadrius vociferus (killdeer): 104287158
Entry
104287158         CDS       T08577                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03020  RNA polymerase
cvf03420  Nucleotide excision repair
cvf04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104287158 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104287158 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    104287158 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvf03021]
    104287158 (POLR2E)
   03400 DNA repair and recombination proteins [BR:cvf03400]
    104287158 (POLR2E)
Transcription machinery [BR:cvf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     104287158 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     104287158 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     104287158 (POLR2E)
DNA repair and recombination proteins [BR:cvf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104287158 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N EIAV_Rev
Other DBs
NCBI-GeneID: 104287158
NCBI-ProteinID: XP_009884127
LinkDB
Position
Unknown
AA seq 139 aa
MFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFL
QQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVV
KIIRPSETAGRYITYRLVQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgttcgtcttcttcccggaggagcccaaggttggaataaagacgatcaagatgtactgc
cagagaatgcaggaggagaacatcaccagagcgctgattgtggtgcagcaaggcatgacc
ccctcggcaaagcagtccctggtagatatggctcccaaatacatcctggagcagttcctg
cagcaggagcttctgatcaacatcacagagcacgagttggtcccagagcacgtcgtgatg
acaaaggaagaagtaaccgagctactggccagatataagctgagagagaaccagctcccg
aggatacaggccggggatcccgtggcacggtacttcggaataaagcgtggtcaggtcgtg
aagatcataaggccgagtgagactgcgggccgctacatcacctacaggctggtgcagtga

DBGET integrated database retrieval system