Charadrius vociferus (killdeer): 104287224
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Entry
104287224 CDS
T08577
Symbol
WDR90
Name
(RefSeq) WD repeat-containing protein 90
KO
K24759
WD repeat-containing protein 90
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvf03037
]
104287224 (WDR90)
Cilium and associated proteins [BR:
cvf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104287224 (WDR90)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
CFA20_dom
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
DUF7165
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_RSE1_2nd
WD_LRWD1
WDR54
Ge1_WD40
B-prop_COPA_B_2nd
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
104287224
NCBI-ProteinID:
XP_009884578
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MGAPPGREDREHGVTGSVTGFGGTRAWQRPYLNIFKHFCVEEWKRSAKEGDVAALTDARL
KGTVYRIRGSVPASNYLQLPRTGTQSLGPTGRYLYLLFRPMSRKHFVVHLDVATEENQVV
RISFSTLFKEFKATATWLQFPFLCGAAKGSVHDGAARRGEEHLVGAAPADVRWTCLLCSN
LLVKNLCTSDLVFDPAVTFSEARQAALACRGVAPMPREMAFPVPKGEKWHDLYDYIRFPS
EGSKVPYDSIQKSCPHPAAGGQVSEDPVRQLPQLVTLTKAVRDRLSLVHQITSPKAMPRR
CPAIAKSIPEVHLTAPAPPRAVPAGDQELERSQRPHSAGDAGRSPAVRDGGIHVYAHQRT
ERTIRAIHPGSEEMLLPDPILKLRTIIGFGGCSTKWALWTRNNAAVVYPCHAVIVTLQIR
TGEQRFFLGHTDKVSALAFNGNSTLLASAQAGPLSVVRLWDFPTGSCLSVFKTHVRSLLS
LSFSYSGAVLCGVGKDGHGKTMVVVWNVAQVTRGGEVALLAKAHTDVDIQALKIAFFDDT
RMVSCGRDNVRLWRVRSGALRSCPVSLGEYHSLEFTDLAFEEGHAAEREPEDRTLFVCSK
SGHVLEVDYKNVCMRSVRRLLPAQPRGCQRQDKAGDAGPGIAINSISFSSTFCATGSEDG
YLRLWPLDFSAAVLEAEHEAPVSSVCISPDSRRVLCTTAAGNLGYLDIQSRDYNTLMRSH
EDSVLAFSVEGIWKQMATVSQDNTIRVWDLGCMQQLYDFTAADETPCAVAFHPTQQILAC
GFDSGMVRTFSLAASDLLVEHKQHRTVITGLTFSPDGNFMFSSCLQGTLALYSCMAQNSH
ILRVLGNVVARDAGSSPDALVVSGDSRLLAFVGPSKYVVTVMEACSLDELLRVDISILDL
NSTALDSAVRVYFAPVPRGELLVSTSSNKILVLDAKTGRLVREVSPVHKLPCSSLALSKD
GRYLLTAGDKVIKVWDYRMRFDVNFQVYIGHSEPVRQVAFTPDQRHVISVGDAIFLWDFL
ALPAERSPRAGAHSSESALLPGAGIFSESDKEEEAELPGSSRMVANRDKDASVVMVEPVR
NEELLVVRPKVRQESSKSPEESANEPRKETKSPKSQCSIRPDSYRHFTPRFKASVLPQNF
LSPPAGSEVLKLKAVIGYNGNGRGNMVWNPDTGFFAYTCGCIIVVEDLHSGSQSHWLGHA
EEISTLAVSHDAQALASASGKRSGDSHCQICIWNVQDGVCTASLFHHETQVQAMAFSRDD
RFLITLGDYSDQTIALWNTYTYELMSSTCISEPVHDVAFSPLSHRDLACVGKGAVMFWLL
EQQGADVNLKVHRAPAPAVLGPVEMTSLCYGADTLLYSGTNSGQICVWDTETNCCFMTWE
ADEGEIGVLVCRRNRLVSGSNTKRIRLWAVAAVQELRLKGPDASSVLLEHEITLDGTIVS
AAFDDSLEMGIVGTTAGTLWYINWMESTSIRLISGHKNKVTEVCFSPDETHCATCGEDGS
VRIWSLGSMELVVQFQVLNQSCQCLAWEPRPAVSCRAESRHVVAGYSDGTIRVFSISRTE
MELKMHPHAVALTAIAYSTDGEMILSGGKDGLVAVSSPHTGMTIHVLAEHKGSPITVLQC
SRKQYRDFGVEGGELWLATSSDRRVSVWASDWLKDKCELLDWLSFPAPAGPEGLGSLPPS
LAAFCPWEPGTLIYVGFGMQKEALFYSLRKKQVVEKISLPYFATSLSLSPAARFIAVGFG
ERLLRLLRCPTSDAQDYAGHDDAVHLCRFAPSGRRLLTASHSAVLVWELTGS
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaccaccagggagggaggaccgggagcatggggttaccgggtccgtcaccggg
tttggggggactcgagcctggcagcgcccctacctgaacatcttcaagcacttctgcgtg
gaggagtggaagcgctcagccaaggagggggacgtggccgccctcacggacgcgaggctg
aagggaaccgtctaccggatccggggctccgtccccgccagcaactacctgcagctgccc
cggacggggacgcagtcgctggggccgacggggcgctacctctacctgctcttcaggccc
atgtcccgcaagcacttcgtcgtccacctggacgtcgccaccgaggaaaaccaggtggtt
cgcatctctttctccaccctctttaaggagttcaaagccacagccacctggctgcagttc
cccttcctctgcggagcagccaaaggctctgtgcatgacggcgcagccagacgcggtgag
gagcatctcgtgggagcagcccccgctgacgtgcgttggacctgcctgctctgctccaac
ctgctggtgaaaaacctctgcacgagcgacttagtgttcgacccagctgtgaccttctct
gaggcccgccaagccgccctggcctgccgcggggtggctcccatgccgcgggaaatggct
ttccctgtgccgaagggagagaagtggcacgacctctacgactacatcaggttcccatcc
gaggggtccaaggtgccgtacgactccatccagaagagctgtccccatcctgcggcaggt
ggccaagtctctgaggaccccgtccggcagctgccccagctggtgacgctcaccaaagca
gtccgtgaccgcctgtccctcgtccaccagataaccagtcccaaagctatgccgcgtcgg
tgtcctgcaattgccaaaagcatccctgaggttcacctgacagccccagcgcctccgaga
gccgttcctgctggggaccaggagcttgagaggagccagagaccgcacagtgcgggggac
gctgggcggtcaccggcagtcagggacggtggcatccacgtgtacgctcaccagaggacc
gagcggaccatccgagccatccaccccggctcagaggagatgctcttaccagatcccatc
ctgaaactgagaacaattattggcttcggaggttgcagcaccaaatgggcgctgtggact
cgcaacaacgctgcggtggtctacccctgccatgctgttatagtcaccctgcagatccgg
accggagagcagaggtttttccttggacatacggataaggtgtcagcgctggctttcaac
gggaacagcaccctgctggcttccgcacaggctggtcccctgagcgtggtgcgcctctgg
gacttcccgacgggcagctgcctctcggtgttcaaaacccacgtccgctccctcttgtcc
ctgagcttttcctacagcggagccgttctgtgcggtgtcggaaaggacgggcacggcaaa
acgatggtggtggtgtggaacgttgctcaggtgacccgtggaggagaagtggccctgctt
gccaaagcgcacacggatgtggacatccaggccttgaagattgctttttttgatgatacc
aggatggtgtcgtgcggccgggacaacgtcaggctgtggcgagtgcggagcggagcgctg
cgctcatgtcccgtcagtctgggcgagtaccattccctggagttcaccgacctggccttc
gaggaggggcacgctgccgagcgggagccggaggaccgcacgctctttgtctgcagcaag
agcggccacgtcctggaggtggactacaagaacgtctgcatgaggagcgtgcggcggctg
ctgccggcacagccccggggttgccagcggcaggacaaggcaggcgacgcaggccctggg
atcgctataaacagtattagcttctcttcaaccttctgcgccacgggttcagaagacggc
tacctgcggctgtggccactggacttctcggctgcggtcttagaggcagagcacgaggct
ccggtcagttctgtctgcatcagcccggacagccggagggtcttgtgcacgacggctgct
gggaatctgggctacctggatatccagtcccgggactataacaccctcatgcgctctcac
gaggactccgtgttggcattctcggtggaggggatttggaagcagatggcaacggtgtct
caggacaataccatccgagtctgggacctgggctgcatgcagcagctgtatgacttcaca
gctgcagacgaaacgccgtgcgctgtggcctttcaccctacccagcagatcctggcctgc
ggctttgacagcgggatggtgcggaccttcagcttggctgcctccgatctgctggtggag
cacaagcagcatcgcactgtaatcactggattgaccttctctccagatggcaatttcatg
ttcagctcatgtttgcagggaactctggctctttacagctgtatggcacagaacagccac
atcctgagagtgctgggcaatgtggtggcccgggatgctgggagcagtccggatgctttg
gtggtcagtggggacagccgtctcctggcctttgtgggtccctccaagtacgttgtgacc
gtgatggaagcctgctcgctagatgagctgctgagggtggacatcagcatcctcgatttg
aacagcacggccttggactctgcagtgagagtctactttgctccggtgcctcgaggcgag
ctcctggtgtccacttcttccaataaaatccttgtgcttgacgcgaaaacgggacgactg
gtgcgagaggtgtctcccgtgcacaagctgccctgttcttccttggcgctgagcaaggac
ggcaggtacctgctcactgctggcgacaaagttatcaaagtgtgggactatcggatgcgc
ttcgatgtcaacttccaggtgtacatcggccactcagagccagtgcgccaggtggccttc
accccagaccaacggcatgtcatcagcgttggagatgccatcttcctctgggatttcctg
gctctgcccgcggagaggtcaccccgagctggggctcattcctctgagtccgctctgctg
ccgggagcaggtattttctccgagtcggacaaagaggaggaagcagagctgccaggcagc
agcaggatggtggcgaacagagataaagacgcctcagtcgtcatggtggagccggtcaga
aatgaggagctgcttgttgtgaggcctaaagtgaggcaggagagctccaagtctcctgaa
gaatcagcaaacgaacccagaaaggagaccaaaagtcccaagtcccaatgctccatccgc
ccagattcctaccggcatttcactcctcgctttaaggcatcggtgctcccccagaatttc
ttatctcctccagctggcagtgaggtcttgaagttgaaagcagtgatcggctacaacggg
aacggcagagggaatatggtgtggaacccggacacaggtttcttcgcctacacctgtggc
tgcatcatcgtggttgaagacctgcactcggggtcacagagtcactggcttggccacgca
gaggagatctctacgctcgctgtcagccacgatgcccaggctcttgcctctgcctcggga
aagaggagcggagactcccattgtcagatctgcatctggaatgtccaggatggggtttgc
acagcaagtctcttccatcacgagacgcaagtacaagccatggcattctctcgggacgac
aggttccttattaccctaggggactacagcgatcaaaccattgctctgtggaatacctac
acttacgaactcatgtcatcgacttgtatctcagagccagtccacgacgtggcttttagt
cccctttctcacagagacctggcctgtgtggggaagggagctgtgatgttttggctgttg
gagcagcagggagctgatgtcaacctcaaggttcatcgggcccctgccccggccgtgcta
gggccggtggagatgacctctctctgttatggtgccgacacccttctttacagtgggacc
aactcaggccagatctgcgtgtgggacaccgagactaattgctgcttcatgacatgggag
gccgatgagggcgagatcggtgtgctggtgtgtcggcgcaacaggctggtgagcggcagc
aacacgaaacgcatccgcttgtgggcagtggctgccgtgcaggagctgaggctgaaaggt
cccgacgccagctcagtcctgctagaacatgagattaccctcgatgggacaatagtcagt
gcagcctttgatgactctctggaaatgggaattgtgggcaccacggcaggaacactgtgg
tacatcaactggatggagagcacaagcatccggctaatcagcggccacaagaacaaggta
accgaagtgtgcttcagtcctgatgagactcactgcgcaacgtgcggggaagacggcagc
gtgaggatttggtctctgggcagcatggagctggtggtacagttccaggtgctcaaccag
agctgccagtgcctggcctgggagcctcgtcccgccgtttcatgcagagctgagagccga
catgtagtggcagggtacagcgatggcaccatccgcgtgttcagcatttccaggacagag
atggagctgaaaatgcacccccatgctgttgcactgacggcaattgcctactccacagac
ggagaaatgatcttatcggggggcaaggacgggctcgtggctgtcagcagccctcacacc
ggaatgactatccacgtccttgctgagcacaaaggctcccccatcactgtcctccagtgc
agcaggaagcagtaccgagactttggggtggaaggaggggagctctggctggccaccagc
tcagaccggcgggtcagcgtctgggcctccgactggctgaaggataagtgcgaactcctc
gactggctcagcttcccagctcctgccggccccgagggccttggcagcctcccgcccagc
ctggccgccttctgcccttgggaaccaggtaccctgatctacgtcggctttgggatgcag
aaggaagccttgttttacagtctgcgcaagaaacaggtagttgagaagatctccttgcca
tacttcgccacatcactgagcctgtctcctgcagcacgcttcattgctgtcggctttggc
gaacggcttctgaggctgctgcgttgtcccaccagcgatgcgcaggactatgccggccac
gatgatgctgtccacctctgccgcttcgccccctccggccgccgcctcctcacggcctcc
cacagcgccgtcctcgtctgggagctcacaggcagttga
DBGET
integrated database retrieval system