Charadrius vociferus (killdeer): 104287318
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Entry
104287318 CDS
T08577
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04517
IgSF CAM signaling
cvf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104287318 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104287318 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104287318 (SPTBN1)
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104287318 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
104287318 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
104287318
NCBI-ProteinID:
XP_009884307
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDTLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
AIQQRLADLQQLWSLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKVAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKAKMAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattatgacaatattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggatgtcgatgactgggacaatgaaaatagttctgctcgactgttt
gaacgatcccgcatcaaggccctagctgatgaacgtgaggcagttcagaagaagactttc
acaaaatgggttaattcccacttggcacgtgtatcatgcagaattacagacctgtacact
gaccttcgtgatggaaggatgctcatcaaacttctggaagttctttcaggagagagactt
cctaaaccaactaagggaaggatgcgtatccattgcttggagaatgttgataaagccctc
cagttcctgaaagagcaaagagtgcacctggaaaacatgggatctcatgatatcgtggat
gggaatcacaggctgacgcttggccttatttggactattatcctgcgattccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaagacagctggttaccccaatgtcaacattcacaactttacgaca
agctggagggacgggatggctttcaatgcactaatacataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcaacaccttggtctcactaagctcctggaccccgaggatatcagcgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacgtactaccactacttctctaagatg
aaagctttagctgttgaaggaaaacgtatcggaaaggtgcttgacaatgccattgaaacg
gagaaaatgattgaaaaatacgaatcactggcttctgaccttcttgagtggattgagcaa
accattataatcctcaacaatcgcaaatttgccaactcgctagttggtgtgcaacagcag
ctacaggcattcaacacttaccgcacagtagagaaaccaccgaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagcaaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaacgactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcgcgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtcttgtttctcaggataattttggctttgaccttccagcagtagaggccgca
acaaagaagcatgaggccattgaaacagacattgcagcttatgaagagcgagtccaggct
gtggttgcggttgcgaaggagcttgagactgaaaattaccatgatatcaaacgcattact
gcgagaaaggacaatgttatacgcctatgggaatatctcctggagctgctcagggcacgg
agacagcggctggagatgaatcttggtctgcaaaagattttccaggaaatgctgtacatt
atggattggatggatgagatgaaggtgcttctgctgtctcaagactatggcaaacacttg
ttaggagttgaagacctgttgcagaaacatgctcttgtggaagctgacattgctattcaa
gctgagagagtgagaggggtcaatgcatctgctcagaagtttgccaccgatggagaaggt
tacaaaccgtgtgacccgcaagttatcagggaccgcgtcgctcacatggagttctgttac
caagagctgtgccagcttgcagctgagcgtcgggcccgcttggaggagtcccgacgcctc
tggaaatttttctgggaaatggctgaagaagagggttggatcagggagaaggaacagatc
ctgtcatctgacgactatgggaaggacctaactagtgtcgtccgtctcttgagtaaacat
aaggcatttgaagacgaaatgagtggtcgtagtggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtccgagaagatcagagaaagaattaag
gatatccgtgagcagtgggctaacttggaacagttatctgctattaggaagaagcgtctg
gaggaagcctctctccttcaccagttccaggctgatgctgatgacattgatgcgtggatg
ttggacatcctcaaaattgtctccagcaatgacgttggccatgatgaatattctactcag
tctttggtcaagaaacacaaagatgtggctgaagagattgcaagctaccggccaaccatt
gacacgcttcacgaacaagcaaaagctctaccacaggaacacgccggatctccagatgtg
cagggcagattgtccggaatagaggaaagatacaaagaggttgctgagctgactcggctg
cgtaaacaggccttgcaggatacccttgctctttataagatgttcagtgaggcagacgct
tgtgagctttggattgatgaaaaggagaagtggctgaataatatgcagattccagagaag
ttggaggacctggaagtgatccagcacagatttgaaagcttagaacccgaaatgaacaat
caggcgtcccgtgttgcagtagtgaaccaaattgctagacagctaatgcacagcggccat
ccaagtgagaaggagatcaaagcacagcaagataagctcaacacaagatggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgatcgaatcc
acacaagatttgggtaatgatctagccggagtgatggccctgcagaggaagctgacgggc
atggaacgtgacctggtagccattgaagccaaactaagcgacctacaaaaagaggcagaa
aagttggaatcagagcatcctgaccaggcacaggctatcctttcacggctcgcagaaatc
aacgatgtatgggaagaaatgaagaccaccctcaagaaccgggaagagtcccttggagag
gcaagcaaacttcagcagttcctgagagatctggatgacttccagtcctggctatccaga
acgcagactgcaattgcatctgaagatatgccaaacacactgacagaggctgagaagctg
ctcactcaacatgagaatattaagaatgaaatcaacaattatgaggaagattatcagaag
atgagggacatgggtgagatggtgacacaagggcaaactgatgctcagtacatgttctta
cgccagcgcctacaagctttggacaccggatggaatgaacttcacaaaatgtgggaaaac
aggcaaaacctcctttcccagtctcatgcctaccagctatttctcagagataccaagcaa
gcagaagcgtttcttaataaccaggagtacgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagctgctattaaaaaacaggaggatttcatgaccacaatggatgct
aatgaagaaaagatcaatgcggttgtagagaccggcaggaggctagttagcgatgggaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataacagggatcttcaaaagttt
cttcaggattgtcaagagctctctctctggatcaatgaaaagatgcttacggcccaggat
atgtcctatgatgaggcaaggaacctgcatagcaaatggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctgtagtgaaagaaaagctgacaggtctccatcaa
atgtgggaagagcttgaatccactacccagaccaaggctcagcgtctctttgatgcaaac
aaggcggagctttttacccagagctgtgctgatttggataaatggttgaatggtttggag
agtcaaattcagtcggacgactacggaaaggatctcaccagtgtcaacatcctattgaag
aagcagcagatgctagagaatcaaatggatgttcgtaagaaggagatagaggagctgcaa
agccaggcaagggctttaagtcaagaagggaagagtacagatgaagtagatggcaaacgc
cttactgtagaaaagaaatttttggagttgttggaacctttgaatgaaagaaaggccaac
ctgctggcctccaaagagatccaccagttcaaccgggacgtggaagatgaaattttgtgg
gtcggcgagaggatgccgatagctacatctactgatcatggacataacctccagactgtg
cagctattaataaagaaaaatcagacccttcagaaagaaatccagggacatcagcctcgt
atcgatgacatttttgagaggagccaaaacattatcacagagagtagccctaacgctgaa
gcaattcagcagagacttgcagacttgcagcagctgtggagcctccttattgaggagaca
gagaaacgccacaagcgcctagaggagtctcacagagcacagcagtattactttgatgct
gctgaggcagaggcctggatgagtgagcaggagctctacatgatgtccgaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgta
gaagactatgctgaaaccgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcacccagaaagcgagcgtatcagcatgcgccagtccaaagtggataagctgtatgcg
ggcctgaaagatcttgctgaagagagacggggcaagctggatgagagacacaggctgttc
cagcttaaccgcgaggtggatgatctggagcagtggattgctgaaagggaggtggtcgca
ggatcccacgagctgggacaggattacgaacatgtgacaatgctacaggagcgattccga
gagtttgcccgagacactggaaacatcggacaggagcgtgttgatactgttaaccacatg
gcagacgaactcatcaactctgggcactcagatgctgcgacaattgcggagtggaaggat
ggactcaatgaggcctgggctgatctcctggagctcattgacacgagaacacaaattcta
gcagcctcttacgaactgcacaaattttaccatgatgccaaggagatcttagggcgtatt
caagacaaacataagaaactgcctgaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacatttgagcatgatatccaggcactcggcacccaggtgaga
cagctgcaggaggatgctgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaaaagggaaaacgaggtcctagaagcatggaaggcactgttggacgcctgtgag
ggccgcagggttagactggtggatacaggagacaaattccgtttcttcagcatggttcgt
gatctcatgctttggatggaagacgttattcgacagatagaagcccaagaaaagccaagg
gatgtttcgtctgttgaactattaatgaacaatcaccagggtatcaaagcagaaatcgat
gcccgaaacgacagctttactacctgcattgagctcggcaaatctcttctggcaagaaaa
cactatgcatcagaggagatcaaggaaaagctgctgcagctaacagaaaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaggtacaccag
ttttcaagagatgcaagtgtggcggaggcctggctgctgggacaggagccctacctatcc
agtcgtgaaataggtcaaagtgttgatgaagtggaaaaactaattaagcggcatgaagca
tttgaaaaatctgcagctacttgggatgagagatttgcagcactggaaagactgacaacg
ttggaactgctggaagtacgtcgacaacaagaggaagaggagaggaagagacagccgccc
actccagagccaagcccaaaagttgcagaggatgcagactcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaatggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcagaaacaaatgaaatggtcaatggagctgcagaacagaggacaagttcg
aaagagtctagtcctgttccctctccaacggcagaccgcaaagccaagatggccattcag
gcccagactgctgctaccctaccagccaaaacacaagagattccttcagctcagatggag
ggcttcttacatcgcaaacatgaatgggagacacacagcaagaaagcctcgagcagatcg
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggattcgaaa
gctgctgcttctggaatcccctaccacaatgagattcctgtcagcttgaaggaagcagtc
tgtgaaatagcggtcgattataaaaagaaaaagcatgtgttcaagctaaggttgactgat
ggcaacgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacatcagctatctcttctgataaaattgaagtgtccccgaccacccagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccct
ggcaagcgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
DBGET
integrated database retrieval system
