Charadrius vociferus (killdeer): 104287325
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Entry
104287325 CDS
T08577
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104287325 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104287325 (PNPT1)
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104287325 (PNPT1)
Enzymes [BR:
cvf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
104287325 (PNPT1)
Messenger RNA biogenesis [BR:
cvf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
104287325 (PNPT1)
Transfer RNA biogenesis [BR:
cvf03016
]
Prokaryotic type
tRNA degradation factors
104287325 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
OAF_N
Motif
Other DBs
NCBI-GeneID:
104287325
NCBI-ProteinID:
XP_009884320
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MELSSGKLARFADGSAVVQLGDTAVMVTAVSKTKPSASQFMPLVVDYRQKAAAAGRIPTN
YLRRELGSTDKEILTSRVIDRSIRPLFPAGYFYDTQILCNLLAVDGINDPDVLAINGASA
ALALSDIPWNGPIGAVRVGLVDGETIINPTRKQMSSSALNLVVAGAPQNQVVMLEATAEN
ILQQDFCHAIKVGVKHTQQIIQGIQQLVKEQGVVKRSVQKLFLAPEEIVECAKKLAFNKI
YAVFTDSSHDKISRDEAINKIRLETEEQLKEKFPEAEPYEIMESFNVVSKDIFRNLVLNE
YRRCDGRDLTSLRDIKCEVNMFKMLHGSALFQRGQTQVLCTVTFDSIESSVKSDLISTAV
SGIKDKNFMLHYEFPPYATNEIGKVTGMNRRELGHGALAERALKPIIPQDFPFTIRVTSE
VLESNGSSSMASACGGSLALMDAGVPVSSAVAGVAVGLITKCSLEKGDIEDYRLLTDILG
IEDYYGDMDFKMAGTNKGITALQVDLKLPGIPIKIVMEAIQQATAAKREILQIMNQTLAK
PRPNRKESGPVVETIHVPLSKRLRFIGPGAYNLKKLQAQTGVTVSQLDEETYSVFAPTPS
AMHEAREFISEICKDDQEINLEFGAVYTATITEIRDSGVMVKLYPNMTPVLLHNSQLDQR
KIKHPSALGLEVGQEIQVKYFGRDPTDGRMRLSRKILQSPATTVLKTLTDKNSIVLGGTV
PQSSTSSQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtcttctggaaaacttgctcggtttgctgatggatctgctgttgttcagcta
ggtgacacagcagtaatggtcacagcagtcagtaagactaagccttctgcatctcagttc
atgccactagtggtggattatcgtcagaaagctgctgcagcaggaagaatccctaccaac
tatctaagaagagaacttggttccactgataaggaaattcttaccagcagagtaatagat
cggtcaatcagaccactctttccagcaggctacttctatgatacacagatcctttgtaat
cttttagcagtagatggcatcaatgatcctgatgttctggcaattaatggagcttctgca
gcacttgcattatctgatatcccatggaatggtcctattggtgcagtaagggtaggactg
gttgatggagaaactattatcaatccaactcgaaaacagatgtcttctagtgctttaaat
ttagttgttgctggagctcctcaaaatcaagttgttatgttggaagcaactgctgagaat
atattgcaacaagacttctgtcatgccatcaaagtaggggtgaagcatacccagcaaata
attcagggaattcaacaactagtgaaagaacaaggtgttgtcaagagatctgttcagaag
ttatttcttgctcctgaagagattgtggaatgtgcaaagaaacttgcttttaacaagatc
tatgcagtgttcacagactcgagccatgataaaatttccagagatgaagcaattaacaaa
attaggcttgaaacagaagaacagctgaaagaaaaatttccagaggctgagccttatgaa
atcatggaatctttcaatgtggtttcaaaggatatttttaggaatcttgttctgaatgaa
tatagaaggtgtgatgggagagatttgacttccctcagagatattaaatgtgaagtgaac
atgtttaaaatgcttcatggatcagccttatttcagagaggtcaaacacaggttctctgt
acagttacatttgactctatagaatcaagtgtaaaatcagatcttatctcaacagcagtg
agtggaataaaagacaaaaacttcatgctgcattatgagtttcctccttatgcaactaat
gagatcggcaaagttactggtatgaacagaagggaacttggacatggtgcactggcagaa
agagctttgaaaccaattattccccaggatttcccgttcacaatacgagttacttctgaa
gtcttggagtcaaatggatcatcttcaatggcttctgcatgtggtggaagtttggcatta
atggatgcaggagttccagtttcaagtgcagtggcaggtgtagcagtgggtctaattacc
aaatgcagtctggaaaaaggagatattgaagactatcgcttgctgacagacatcctggga
attgaagattactatggtgatatggatttcaagatggcgggtactaataaaggaataaca
gccttgcaggttgatctaaaactgccaggaataccaataaaaattgtaatggaagctatt
cagcaagctacagctgcaaagagggagattttacaaattatgaaccaaacgctggcaaaa
cccagaccgaacagaaaagaaagtggaccagttgtagaaactatccacgttccattatca
aaaaggttaagattcattggtcctggggcctataatttgaaaaaacttcaagcacagact
ggtgtaactgtaagtcagttggatgaagagacgtattctgtgtttgcccccacacctagt
gctatgcatgaagcaagagaatttatcagtgaaatctgcaaagatgatcaggaaattaac
ttggaatttggtgcagtttatacagccacgataactgaaataagagattctggagtgatg
gtaaaattgtatccaaacatgacaccagtgttacttcataattcacaacttgatcaaaga
aagattaaacatcctagtgccttgggattagaagttggacaagaaattcaggtgaaatac
ttcggacgtgatccaactgatggtagaatgaggctttcacgtaaaattctacagtcacca
gccacaactgtgcttaaaaccctaacggacaaaaacagtattgtcttgggaggtaccgtt
ccacagtcatctacttcatcccagtga
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