Charadrius vociferus (killdeer): 104287419
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Entry
104287419 CDS
T08577
Symbol
USP8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04137
Mitophagy - animal
cvf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104287419 (USP8)
04137 Mitophagy - animal
104287419 (USP8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvf01002
]
104287419 (USP8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104287419 (USP8)
04121 Ubiquitin system [BR:
cvf04121
]
104287419 (USP8)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104287419 (USP8)
Peptidases and inhibitors [BR:
cvf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104287419 (USP8)
Membrane trafficking [BR:
cvf04131
]
Endosome - Lysosome transport
Others
Others
104287419 (USP8)
Ubiquitin system [BR:
cvf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104287419 (USP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Metallothio_Pro
Motif
Other DBs
NCBI-GeneID:
104287419
NCBI-ProteinID:
XP_009884428
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MPAVASVPKELYLCTSLKDLNKKTEIKPEKTSTKSYVQSALKIFKAAEESRLDRDEEKAY
ILYMKYVTVYNFIKKRPDFKQQQDYFHSILGPTNLKKAIEEAERLSDSLKLRYEEAEVRK
KLEERDRQELQKKQEPKDDGKTSAKNSSESAVDSKGKSQRINGERKHSLERKEQSDSLSA
SVFQGAITAEKLFAMMSDKNIELIIMDARRSKDYQESCIPRSISVPEEAISPGVTANWIE
ARLPEDSRDPWKRRGHFDYVILLDWFSSAEDLKLGTTLQSLKDALFKWESKTILQNEPLI
LEGGYENWLLCFPQYTTNAKVTPPQHSRSEAVTVSLDFTYPSLEEPAPVPPVVAIKPSPT
EVIENEESRDNLEERLKSLNRPNAQDVAVPKSDSSIVVNPVSITRSIPEVDRTKKPSLKI
ADDDRPKPESTVSDSQPVENGRIVPDRSTKPVCDAKSILTEEEKSRVHAETAALLEKNRR
EKELRERQQEEQKERLKREKEEQEQKAKEEQKEKEHKEKLQQSKEDREQKERDEQIKRDQ
EQKEQERARKEVIEAKKQSKNELETIGAKRIETDRISMEEREKGTRTPETQRRTLGDTPQ
TFVAVPGKQTGVKGQPDSGAQKPGPLREDSEQDTERLKSQREPLMRARSEEMGRIIPGLP
AGWAKFLDPITGTFRYYHSPTNTVHMYPPEMAPSSTPPSTPPTHKPKPQVTVEREREHSK
LKRSYSSPDITQAIQEEEKKRIPVTPAVNRDNKPVCYTKAEISRLSASQIRNLNPVFGGS
GPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNLYQDDINRSNFLGHKGEVAEEFGV
IMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKR
YKEENNDHLDDFRAAELAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYL
SLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLK
RFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYC
KNASKQRWFKFDDHEVSEISASSVKSSAAYILFYTSYEQRAVDMAT
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtggcatctgtacctaaggagctatatctctgtacttcattgaaagatctg
aacaagaagacagaaataaaacctgaaaagacaagtacaaagagttatgtgcagagtgct
cttaagattttcaaggcagccgaggaaagcagattggaccgagatgaagaaaaagcttac
attctatacatgaaatatgtgactgtttataactttattaaaaagagacctgattttaag
cagcaacaggattattttcattcaattcttggacctacaaatttaaaaaaagctattgaa
gaagctgaaagactctcagacagccttaaactcagatatgaggaagctgaagttcggaaa
aaacttgaagagagagacagacaagagctgcagaaaaagcaagaaccaaaagatgatgga
aagacttcagccaaaaactcctcagaaagtgctgtggattccaaaggaaaaagccaaagg
attaatggtgagaggaagcattcactggaaagaaaggagcagtctgacagtttgagtgct
tctgtatttcaaggagcaatcacagctgagaaactgtttgcaatgatgtcggacaaaaat
attgaattgattataatggatgctcgaagatcaaaggattatcaggaatcttgtattcca
agatctatcagtgtcccagaagaagccatcagtcctggagttactgctaattggattgaa
gctaggctcccagaggattctagagatccatggaagaggagaggacactttgattatgtt
atactgctagactggtttagttctgccgaagacttaaagctaggaacaactcttcagagc
ctgaaggatgcgctttttaagtgggaaagcaaaactatactgcagaatgaacctttaatt
ctagaaggaggttatgaaaattggctcctttgttttccccagtacacaacaaatgctaaa
gtgactccaccccagcatagcaggagtgaagcagtgactgtttctttggattttacatat
ccatctctggaagagccagctcctgttccacctgttgttgctataaagccgtctccaaca
gaagtgattgaaaatgaagaaagcagagataatctggaagagagactaaaatcacttaac
agaccaaacgcacaggatgttgctgttccaaaatctgacagttcaattgtagttaatcca
gtatcgattacaagaagtatccctgaggttgatcgtactaaaaagccttcactaaaaatt
gctgatgatgacagaccaaaacctgaaagtacagtgagtgacagccagcctgttgagaat
ggtcgaatagttccagaccggtccacaaagccagtatgtgatgcaaagagcattctgaca
gaagaagaaaagagtcgtgtacatgcagaaactgctgccctactagagaaaaacagacgg
gaaaaagaacttcgggagaggcaacaagaagaacagaaagagagactgaagcgagaaaaa
gaagaacaagaacaaaaagcaaaagaagaacagaaagaaaaggaacacaaagaaaagcta
cagcaatccaaagaggacagagaacagaaagagagggatgagcaaataaaaagagatcag
gagcaaaaggaacaagaaagagcacgcaaagaagtgatagaagcaaaaaagcaaagtaaa
aatgaactagaaaccattggtgcaaaaaggattgagactgacagaatatctatggaagaa
agagaaaagggaactcgaacaccagaaacacagagacgcacactgggtgacacacctcag
acctttgtggctgttccaggcaagcaaactggggttaaaggacaaccagacagtggagct
caaaagccaggaccacttagagaggattctgaacaagatactgaaagacttaaatctcag
cgggagccattaatgagagcacgaagtgaagaaatgggaaggataataccaggactgcct
gcaggctgggcaaagtttctggatccaatcactggaacctttcgttactatcactcgcca
acaaatactgttcatatgtatccaccagaaatggctccttcatccacgcctccatcaacc
cctccaactcataaacccaagccacaggtgactgttgaacgagaaagagaacactccaaa
ctgaagcgctcctactcttccccagatataacccaagccattcaggaggaagagaagaaa
agaattcctgtaaccccagcagtcaatcgtgacaataaacccgtctgttatactaaggca
gaaatttcgagactctctgcatcacaaattcggaatcttaatcctgtgtttggcggatcg
ggaccagctcttacaggacttcgtaatctagggaacacttgctatatgaattccatatta
cagtgtctgtgcaacgcacctcacctggccgattattttaacagaaacttgtatcaggat
gatattaacaggtcaaatttcctggggcataaaggtgaagtggctgaagagtttggtgta
ataatgaaagctttatggacaggacagtataaatatatcagtccaaaagactttaaaatt
acaattgggaagattaatgaccaatttgcaggatacagccaacaggactcgcaagaattg
cttctctttctaatggatggcttgcatgaagacctaaataaagctgacaacaggaaaaga
tacaaggaagaaaacaatgatcatcttgatgacttcagagcagcagaactagcctggcac
aaacacaaacagctcaatgagtccattattgtggcactttttcaaggccagttcaagtct
acagtgcagtgtcttacatgtcacaagaagtcccggacctttgaggctttcatgtatttg
tcgttaccgcttgcatctactagtaaatgtacactgcaggaatgccttaggttgttctcc
aaagaggaaaagctcaccgataacaatagattttactgtagccattgcaaaactcggagg
gattctctgaaaaagatagaaatttggaaattaccacctgttcttcttgtgcacttgaaa
cgattttcctatgatggaagatggaagcaaaagcttcaaacttctgtagatttcccattg
gaaactcttgacctttcacagtatgttattggtccaaagaataacttgaagagatacaat
ctgttttcagtatcaaatcattatggcgggttggatggagggcactatacagcctactgc
aaaaatgcttcaaaacaacgctggtttaagtttgacgaccatgaagtatctgagatctca
gcatcatctgtgaaatcctcagctgcatatattctcttttacacttcttatgaacagcga
gcagtggatatggccacataa
DBGET
integrated database retrieval system
