Charadrius vociferus (killdeer): 104287447
Help
Entry
104287447 CDS
T08577
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104287447 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvf02000
]
104287447 (TMC3)
03037 Cilium and associated proteins [BR:
cvf03037
]
104287447 (TMC3)
Transporters [BR:
cvf02000
]
Other transporters
Pores ion channels [TC:
1
]
104287447 (TMC3)
Cilium and associated proteins [BR:
cvf03037
]
Other cilia and associated proteins
Stereociliary proteins
104287447 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
104287447
NCBI-ProteinID:
XP_009884459
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MAAATGAAAAKTAKSCKKYRTVKRHAGIYTYQEPPHSNSDDDIGEEKAESHDPEQIFQNI
QYQKEIMSNIRCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFIRLAY
NFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAPF
GSTVSKTIPKEHIESAQDLDTIWSLGGYLQYSVLFYGYYGHDRKIGKAGYRLPLAYFLVG
MAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRLFCAWDYLIGNPEAAESKAAAIVN
SIREAILEEQEKKKSKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQRLERTKKEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVDSMSVTDSDVNNNASNSTTFLATKTLSKEDNLSTTIPDVQIKRNGIVTLEESRTQG
LTVPDSLVNKTVSLNTQNPQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLCVRY
LSDCWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLR
SWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQEK
IYDIVSETIQNDFPTWFNTVITYISSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRM
KIQTERTEDKKKVVQMAVARIQKLDGNDKRPEQETDIISQESSVRSSTPRKNGSVLNFES
PVSKGTRIQTISQSVPQTVPSTDVARPVNATPTTSTSLTPAPSVSSVQKARNDHITNRYP
SVVHGTASELCKAKPYTPATFKKHTEDVHSEPLFRKGIRQVNPDALGAGAPGFVGRRPYA
TRYFVVNENESRKKSHRSTSRLQRHFRKDESGDVIELYPRNVRRYVVRTPHQMYSPHPSE
DEEDEEELGREFINRSHRPRSLSDLRPAPRFYIGERADGHILTSKDLARVHYKSWDDGFE
LDLDRPPYAYKKVHLNYPEPRVKPKSKQKLEQSLTESDSISIESSSDPQNSSNDQYIQVI
HSKEKYPKPGAKLTKKKSKNSVDLTEPNELVCSNV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcaacgggcgccgcggcagccaaaactgccaagtcctgcaaaaagtatcga
acggtgaagcgacacgccggcatctatacctaccaggagccaccacacagcaactcggac
gatgatatcggtgaggaaaaggctgagagccatgacccagagcagatctttcagaacatc
cagtaccagaaggagatcatgtccaacatccgctgccggccgtggccgatgaggcagaag
ctgagggcgctcagacaggcgaaggagatcgtgctgaagtacgaagggaggctcactagg
acaaggggttaccaagctgctggggcagagctttggaggaagtttattagacttgcgtat
aattttgtggtaatctttattccttgggaaatgagaataaagaaaatcgagagtcatttt
gggtctggagttgcctcttacttcatcttcttgagatggctatttggaatcaatattgta
cttaccataatgacaggagcatttgtagtcttaccagagctactggccggagcaccgttc
ggcagcaccgtcagcaagaccattcccaaggagcatattgaatctgctcaagacctggac
accatctggtcactagggggctacctccagtactctgttttgttttatggctactacggt
catgacaggaagattgggaaagccggatatcggctgcctctcgcctacttccttgttgga
atggcagtgtttgcttacagcttcatcattctcttaaaaaaaatggcaaagaactcaaga
atgagtttagcaagtgcctctgatgaaaattacactttctgttggagactgttctgtgct
tgggactatttaataggaaacccggaggctgcagagagcaaagctgccgccatagttaat
agcattagggaagctatattggaagagcaggaaaagaagaaaagcaaaaacttggcagtg
accataagcttaagaattattgcaaacatccttgtgcttctctcgcttgctggtagtatc
tacatcatatactttgtcgtggatcgatcccaaaggttagagcgcaccaaaaaggaattg
actctctgggaaaaaaacgaggtaagcgtcgttgtgtcactgattacaatgattgcaccc
tctgcttttgaacttgtggcagctctggagatgtatcatccaaggaccactcttcgcttc
cagcttgccagggttcttgttctatacctgggaaacctctacagtttaatcattgctctc
ctggataaagtggacagtatgagtgtcactgactctgatgttaacaacaatgcaagtaat
tctaccaccttcttagcaaccaaaacgctttctaaagaagacaatttatctacaactatt
cctgatgtacaaattaagagaaatggcattgtcacattggaggagtctcgcactcaaggc
ttgacagtccctgactcgctcgttaacaaaacagtttcccttaacacccagaacccacag
gatcagtgctgggagacgtatgttggtcaagagatgctaaagctttcaattatcgacatg
attttcacagtcgcaagcatcctgctaattgattttttccgtggactgtgtgtccgatat
ttaagtgattgctggtgctgggatctagaaagcaagtttccagaatatggagaattcaaa
attgcagagaatgtattgcatttggtctacaaccaaggaatgatctggatgggagctttc
ttttcaccttgcttaccagcattcaatgttctcaagttgattgggctcatgtacctgagg
agctgggctgtgttaacctgtaacgtaccacatcagcaggttttcagagcatcacgatcc
aataatttctacttggccatgttgctcttcatgttgttcttatgcatgttaccaacaatt
tttgctattgcccgatataagccatctttaagctgtggtcctttcagcggacaagaaaaa
atatacgatattgtttctgaaacgattcaaaatgattttcccacatggttcaacacggtg
attacttacatcagcagtcctgtggttgtcctccctgcactactacttttattcatgcta
atctattacctacaaagtattgcgagatcattaaaattcaccaacaatcaactgagaatg
aagatccaaacagaaagaactgaagataagaaaaaggtggttcagatggcagtagccaga
atccaaaagctggatgggaatgacaagaggccagagcaagaaactgatattatcagccag
gagtcttctgttcggtcctcaactccccgaaagaatggcagtgtcttgaactttgaatcc
cctgtgagcaaaggcaccagaatacaaaccatttcccagtctgtgccccaaactgtgccc
tcaactgatgttgcaagacctgtcaacgcaactcccacaacttccacctcattaacgcca
gctccatcagtatcaagtgtgcagaaagcaagaaatgatcatatcacaaacaggtacccg
agcgttgtacatgggactgcaagtgagctctgtaaagcaaagccctacacaccagcgact
ttcaaaaagcacactgaagatgttcattctgagcctctcttcagaaaaggcattcggcag
gtaaatccggatgctcttggggcaggggctcctggttttgtgggacgtagaccatatgct
accaggtattttgttgttaatgaaaatgagtcccgcaaaaaatcgcatcgttctacctcc
cgactccaaaggcacttcagaaaagacgaatcgggagacgttattgagttgtatccacgc
aacgtcagaagatacgtggttcgaacaccacaccagatgtattcccctcatcccagtgaa
gatgaggaggatgaagaggaactcgggagagaattcattaacagatcccaccgccctcgc
tcactgtctgatcttcgcccagcaccaagattttacattggggaacgtgctgatggccac
attcttacaagcaaagatctagccagagtgcattacaaatcctgggacgacggttttgag
ctagacctggacaggcctccatacgcttacaagaaagtgcacctgaactatcccgagcca
cgtgtgaaaccaaaatcaaagcagaagctggagcaatctctaacagagtctgattccatt
tccattgaatccagcagtgatccgcagaacagcagcaacgaccagtatatccaggtcatt
catagcaaggaaaagtatccaaaacccggggcaaaactcaccaaaaagaaatcaaaaaac
agtgttgatctgactgagcctaatgaactggtatgctcaaatgtctga
DBGET
integrated database retrieval system
