Charadrius vociferus (killdeer): 104287523
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Entry
104287523 CDS
T08577
Symbol
PMS2
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03430
Mismatch repair
cvf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104287523 (PMS2)
03460 Fanconi anemia pathway
104287523 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104287523 (PMS2)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104287523 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104287523
NCBI-ProteinID:
XP_009884546
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MGGHLSEHCYEVLPLLSISSRSLGEGTNEVTETRNGNQPATHPLARQQRRALSRHLQPAK
AIKPIDRKSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKDHGAELIEVSDNGG
GVEEENFEGLTLKHYTSKIQDFSDLIRVETFGFRGEALSSLCALSDVTIFTCHKSAKVGT
RLVFDHNGKITQKTPFPRQQGTTVNIQQLFYTLPVRHKEFQRNIKKVGICKNGXRYCRHT
VLFQXGVRINCTNQVGQGKKSSVVSTTGSPSLKENIGAVFGQKQLQTLIPFVQLPPNEAV
CEEYGLNATDMPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYH
LYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLMEMFGSDVNKLN
VNQKLLGVAGRTQNVKTLPEETEKPQVEMLPDSETENPSGEGKRVMTLARLRESFCLHQT
TESNFRSPKKIKQQHKSPRQMSLDTTSCTVKTQKAVLTKEPESCHKMDPKIPTPSRYLRK
FEDNADSGFCSTSESDAGCSTPEAGSCLNSESVVSPPEEEFHSSKEQLQNERLKTVGCSE
NSLECDVQILGTEHKLNQVNDWTNQNQLSREASSSSSRVKCFKSRSFKSEADDFKAGKCP
EVKNTRKNMPSVDVLVEVKKKTVPLEFSMKVLAEKVKKIIQQQQKSTERQNYRRFKAKIC
PGENKVAEDELRKEISKEMFAKMEXHWPVQFRVYNSKVESDLFIIDQHATDEKYNFEMLQ
QHTVLQGQKLIAPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTS
KNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMRKLVTH
MGEIEHPWNCPHGRPTMRHIVSLDLISPE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgggagggcatctcagcgagcattgctatgaagttctgcccctgctcagcatctccagc
cgcagcctgggcgagggcacgaatgaagtaaccgagactagaaatgggaaccagccagct
acacaccctctagctcgacagcagagacgagccctgagccggcacctgcagcctgctaaa
gccatcaagcccatcgaccgcaagtccgttcatcggatctgctcgggacaggttgtgctg
aatcttggcactgccgtgaaagagttggtggaaaacagcctggatgctggagctaccaac
atcgatataaaacttaaagatcatggagcagaactgatagaggtttcagataatggaggt
ggagtggaagaggaaaacttcgaaggcttgactctgaaacattatacatcaaagatacaa
gatttttctgatctaatacgtgttgaaacatttgggtttcgaggtgaagctctgagttca
ctgtgtgcattaagcgatgttaccatttttacttgtcataagtctgcaaaggttgggact
cgtttggtatttgatcacaatggtaaaattactcagaaaactccttttccacgacaacaa
ggaacaactgttaacatacagcagttattttatactttgcccgtgcggcataaggaattt
caaagaaacattaaaaaggtaggaatatgcaaaaatggtnccaggtattgcaggcatact
gtattgtttcaanaaggagtgcggattaactgcaccaatcaagttggccaagggaaaaaa
agctccgtggtatccactactggaagccctagtttaaaggagaacattggagcagtattt
gggcaaaaacagttgcagaccctcattccttttgttcagctacctcctaatgaagctgtt
tgtgaagaatatggactcaatgctactgacatgccacaaaatctttacagtattacaggc
ttcatttctcgttgtgatcatggtgttggaaggagtacaacagacagacagtttttcttt
atcaaccaacgtccatgtgatccagcaaaggtcgtcaagcttgtgaatgaagtttatcac
ttgtacaataaacaccagtatccatttgttgtccttaacatttgtgtagattctgagtgt
gttgacatcaatgtaactccagacaaaaggcaaattttacttcaggaggaaaagctttta
ttagcaattttaaaaacttctctgatggagatgtttggtagtgatgttaacaaactgaat
gtcaatcagaaacttctgggcgttgcaggtaggacacaaaatgtgaaaacgcttcctgaa
gagacagaaaagcctcaggtagaaatgctgcctgactctgagactgaaaatccaagtggt
gaaggaaaaagagtaatgactcttgccagattaagggagtcgttctgcctccatcaaacg
acagagagtaattttcgaagccctaaaaagataaaacagcagcacaagtcccctagacaa
atgtcacttgatactacttcgtgtactgtaaagactcagaaggctgtcttgactaaggag
cctgagagttgccataagatggacccaaagataccaactccaagcagatatttgagaaaa
tttgaagataatgcagattccggattctgtagcacttctgagtcagatgccggatgtagt
acaccagaagctgggagctgcctcaatagtgaaagtgtagttagtcctcctgaagaagaa
ttccatagctccaaagaacagcttcaaaatgaacgtcttaaaactgttggatgtagtgag
aattcattggaatgtgatgttcagatcttgggcactgaacataagttaaatcaagtgaat
gactggactaatcaaaatcagttatctcgagaagccagtagttcttcctcaagggtcaag
tgttttaaaagcagaagctttaaaagtgaagcagatgacttcaaggcaggtaaatgtcct
gaagtgaagaatactaggaagaatatgccaagcgttgatgtactggtggaagttaaaaag
aaaaccgtgccacttgaattctctatgaaggttttagcagaaaaggtaaaaaagataata
cagcaacaacagaaaagtacagaaagacaaaattacagaagatttaaagcaaaaatttgt
cctggagaaaataaagtagcagaagatgaattaagaaaagagatcagtaaagaaatgttt
gcaaaaatggaanatcattggccagttcaatttagggtttataatagcaaagttgaatct
gatcttttcataattgaccaacatgctactgatgaaaaatacaactttgagatgttacaa
caacacactgttcttcaaggtcagaagctgatagcgcctcaaaatctcaatttaacagct
gtaaatgaaactgtattgattgaaaacctggaaatattcagaaaaaatgggtttgatttt
gtcataaatgaaaatgctcctgtaactcaaagagttaaattaatatcattgccaacaagc
aaaaactggacttttggtccacaagacatagatgagctgatcttcatgttaagtgactgt
cctggagtcatgtgtaggccctccagggtcagacagatgtttgcttctcgagcttgcagg
aagtctgtgatgattggaactgcgttgaatgtgcaggaaatgagaaaactggtcacccac
atgggcgagattgagcatccctggaactgcccccacggaaggcctaccatgcgacacata
gtcagtctagacttgatttcaccagaataa
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