Charadrius vociferus (killdeer): 104287581
Help
Entry
104287581 CDS
T08577
Symbol
SLC6A5
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104287581 (SLC6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvf02000
]
104287581 (SLC6A5)
Transporters [BR:
cvf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104287581 (SLC6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104287581
NCBI-ProteinID:
XP_009884606
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MDPASVIQIKAKPQPQVDKALQRIRKAGLGDIAANDKREQLEVRFAAVHPQPSATRWGLA
HLSGCERDCPELQKELFVLAGDLPEFSVTYPCICKANITLMEKDYTSQRDMSKQVVNSPE
PIAPGPNDGAGVVRVGPENEPQNAPSQAPAAMSRLPRSLSNDNKTLPSEEPKPNDFERTK
VGICKLSSTPVQANSTLRRESVETFPCKHTPGAGAVGQAAIPHCKIPALQSTDGDANLTL
GKSTLEQNNAKGAWVTLSQSTVVLGTDGSTSVLPQSGGGAFLIPYLMMLALAGIPIFFLE
VSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIILCYTLFYLFASFVPVLPW
ASCNNPWNTPDCKDKNKLLLDSCIIGDHPKIQIKNSTFCMSAYPNLTMVNFTSEGNKTFV
SGSEEYFKYFVLKISAGIEYPGEIRWPLALSLFLAWVIVYASLAKGIKSSGKVVYFTATF
PYVVLIILLIRGVTLPGAGAGIWYFITPKWEKLIDAMVWKDAATQIFFSLSAAWGGLITL
SSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANELKVNIEAVADQGPGIAFV
VYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRTHKALFTLG
CCVSFFIMGFPMITQGGMYMLQLVDTYAASYSLVIIAIFELVGVSYIYGLQRFCEDIEMM
IGFQPSKFWRVCWAFVTPTILTFILCFSFYQWEPMTYGAYHYPGWSMVLGWLMLACSVIW
IPVMFVIKMHLAPGKFIERLKLVCSPQPDWGPFLAKHRGERYMNMIDPLGTSSLGLKLPV
KDIELGTQC
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggatccagcttctgtgatccagataaaagcaaagcctcaacctcaggtagataaagct
ctccagaggattcggaaggctggtttgggagatatagctgctaacgataaaagggagcag
ctggaggttcgctttgcggctgtgcatcctcagccctcagcgacccgatggggacttgct
catctctcgggctgcgaaagagactgtcctgagctgcagaaagagcttttcgtacttgct
ggggacttgcctgaattcagtgtcacctacccgtgtatttgtaaagctaatattacactg
atggagaaggattacaccagtcaaagggatatgagcaagcaggttgtgaacagtcctgaa
cccattgctcctggacccaatgatggtgcgggagttgtaagagtcggccccgaaaacgaa
ccgcagaatgccccatcgcaagcccctgccgcgatgtccaggcttccccgatcgctctct
aacgacaacaaaacacttccctccgaagaacctaaaccaaatgattttgagaggaccaaa
gtagggatctgcaagctcagcagcaccccggtgcaagccaactccactctccggagggaa
tctgtggaaacctttccgtgcaagcacaccccgggggcaggggccgtcgggcaagctgct
atccctcactgcaaaattcccgctttgcaaagcacagacggggatgctaatctaaccctt
ggtaagagcacactggagcaaaacaacgccaaaggcgcctgggtgaccttgagccagagt
accgtggtattgggcacagatggcagtacttctgttcttcctcagagtggagggggtgcg
tttctcatcccctatttgatgatgttggctctagctgggatccccattttcttcctggaa
gtctccctggggcagtttgctagtcaggggcccgtgtctgtctggaaagccatccccgcc
ttgcaaggctgcggcattgcgatgctgatcatctccgttctaatagccatatattacaat
attattctgtgctacacacttttctacctttttgcgtcctttgtacctgtgctaccttgg
gcttcctgtaacaacccctggaatacaccagactgtaaagataaaaacaaacttttgtta
gattcctgcattattggtgaccacccaaaaatccaaatcaagaactccactttctgtatg
agtgcctatccaaacttgactatggttaacttcaccagtgaaggaaacaaaacgtttgtc
agtggaagtgaagaatacttcaagtactttgtattgaagatttcagcagggattgaatat
cctggtgagattagatggcccttggcactatctcttttcctagcctgggtgattgtatat
gcctcccttgctaaaggaatcaagtcatcaggaaaagtggtgtactttaccgctacgttc
ccctatgtagttctcatcatccttcttataagaggagtaactctacctggagctggagct
ggaatctggtacttcatcacgccaaagtgggagaagctgattgacgctatggtttggaag
gatgctgccactcagattttcttctccttatctgcagcatggggaggtctgattactctc
tcttcctacaacaaattccataataattgctacagggacacattgatagtcacgtgtacc
aacagtgccacaagtatatttgcaggctttgtcatcttctcagttattggcttcatggca
aatgagctcaaagtgaatatcgaagctgtggcagaccaaggtcctggaattgctttcgtg
gtttacccagaagccttaactaggcttccactctctcccttctgggctataatattcttt
ttgatgcttctgacgcttggattggacactatgtttgccactattgagaccatagtgacc
tccgtttcggatgagttccccaaatacttacgtacgcacaaggcactgttcactcttggg
tgctgcgtctcctttttcatcatgggatttcctatgatcactcagggtggaatgtatatg
ttacagcttgtggacacttacgcagcttcttattctcttgtcatcattgccatcttcgag
cttgttggagtgtcctatatatacgggttgcagagattttgcgaagatatagaaatgatg
attggattccagccaagtaaattctggagagtctgttgggcatttgtgaccccgactatt
ttaacatttattctctgcttcagtttttaccaatgggaaccgatgacttacggagcttac
cactacccgggctggtccatggtgctcgggtggctgatgctggcctgctcggtgatctgg
atcccggtgatgtttgtgataaaaatgcatctcgccccgggcaaatttattgagcgactc
aagttggtgtgctctccacagcccgactggggtccgtttttggccaagcaccgcggtgaa
cgttacatgaatatgatcgatccactgggaacctcttccctgggacttaaactgccggtg
aaggatatagagctggggacccaatgctaa
DBGET
integrated database retrieval system
