KEGG   Charadrius vociferus (killdeer): 104287593
Entry
104287593         CDS       T08577                                 
Symbol
RBM12
Name
(RefSeq) RNA-binding protein 12
  KO
K24524  copine 1/2/3
K24526  RNA-binding protein 12
Organism
cvf  Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvf03041]
    104287593 (RBM12)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cvf04990]
    104287593 (RBM12)
Spliceosome [BR:cvf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    104287593 (RBM12)
Domain-containing proteins not elsewhere classified [BR:cvf04990]
 Von Willebrand domain-containing proteins
  VWA domain-containing proteins
   104287593 (RBM12)
SSDB
Motif
Pfam: Copine RRM_1 C2 vWA-TerF-like VWA
Other DBs
NCBI-GeneID: 104287593
NCBI-ProteinID: XP_009884617
LinkDB
Position
Unknown
AA seq 1410 aa
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDMPPANASRSGPPPSSGMSGRVNLP
TTVPNFNNPSPSVVTASTTVHESNKNISTFSTASMGTAPPNLGSTFGSPTFSSTIPSTAS
PMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPPVPPMTPMPP
ISGIPPMNPPPVAPLPTGMNGSGAAVNMNSGLNPLFIGPMNPVNPIQMNSQSSVKPIPIN
PDDLYVSVHGMPFSATESDVKDFFLGLRVDAVHMLKDHVGRNNGNGLVKFFSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQTMGPSGQSHPPPPQAHTRSKSPSGQKR
SRSRSPHEQGFCVYLKGLPFESENKHVIDFFKKLDIVEDSIYIAYGPNGKAIGEGFVEFR
NEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDMIRKRLQNFNYDQREILMNAEGEP
GLPKLCAHISNIPYNITKMEILQFLEGLAVEENSVQILVDNNGQGLGQALVQFKAEDDAR
KAERLHRKKLNGRDVVLRLITVEEMRDIERNPPSQGKKILKIPIQGNATVPGAQGTGGDE
HAFLGNSKDANNGPPFNFPGNFSGSGTFGPPLPPPGIGGFPDSRPGIPTVASSGLPGAGI
EVPGFAGGPGNLSGPAAFAGGPQTFGNGPGNLSGPPAFGAGPPGIATGLGHLSGPPGFGP
GPGNIHISGPPGFGTGSGKPGPTVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEK
GMPTGEAMVAFESRDEAMAAVVDLNDRPIGSRKVKLMAGCVSRVELSVTCRSLLDRDLGS
RSDPLCVVLQDAGGGRWAELDRTERIKNCQNPEFCKKLVVDYYFEKVQKLKFGVYDIDNK
SFDLNDDDYLGGIECTLGQVVSSSVFTRPLELKQGKPAGKGTITISAEEIKDTRVVYLEI
EARNLDKKDLLGKSDPFLEFYKQSDAGTWQLVYRSEVIKNNLNPCWRKFSVPLQTFCGGD
FNKPIKVQCADYDSDGSHDLIGTFETNLTQLQKGGDGSAVEFECIHPEKKQKKKSYKNSG
IIRIKSCKTETEYSFLDYVMGGCQINFTVGVDFTGSNGDPRSPDSLHYISPDGINEYLIA
IWSVGSVVQDYDMDKLFPAFGFGAQIPPSWQVSHEFALNFNPSNPYCQGIQGIVDAYRQI
LPQIRLYGPTNFSPIINHVARFAAHSAQQGTASQYFILLIITDGEITDLDQTRQAIVNAS
KLPMSIIIVGVGEADFKAMEFLDGDNGVLKSLTGEPAARDIVQFVPFRQFKNAPREALSQ
MVLAEVPKQLVSYYKWQGWPPMKLPEIKMM
NT seq 4233 nt   +upstreamnt  +downstreamnt
atggctgtggtcatccgcttgcaaggtctcccgattgtggcggggaccatggacattcgc
cacttcttctctggattgaccattcctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactactgctgagcagtaaaactgaaatgcag
aacatgatagaactcagtcgtaggcgttttgaaactgccaatctagatatgccaccagca
aatgctagcaggtcaggaccaccacctagttctggaatgagtggaagggttaacttgcct
actactgtacctaactttaataatccttctcctagtgtagtaactgcttctactactgtg
catgaaagcaataaaaacatatccacattttctactgccagtatggggactgcacctcca
aatcttgggagtacctttggtagtccaacgtttagttcaactatacctagcacagcatcc
ccaatgaacacagtacctcctccaccaatccctcctatcccagctatgccatctttgcca
ccaatgccttctattcccccgatacctgttccacctcctgtacctacactgcctcctgtt
cctccggttcctccgataccccctgtgcctcccgtacccccaatgacacctatgcctccc
atatcaggaattcctcctatgaatcctccacccgtagcacctttacccactggaatgaat
gggtctggagcagcagtgaatatgaacagcggcttgaatccattgtttattggtcccatg
aatcctgtaaatcctatccagatgaattctcaaagcagtgtcaagccaataccaatcaat
ccagatgatttgtatgtcagcgttcatggaatgcccttttctgcaacagaatctgatgtg
aaagattttttccttgggctccgtgtggatgcagtccatatgctaaaggatcatgtaggt
cgaaataatggaaatggactagttaagtttttttctcctcaagatacatttgaagcactg
aagcgaaacagaatgctgatgattcagcgctatgttgaagttagtcctgcaacagagaga
cagtgggtggctgctggaggccacataactttcaagcaaaccatgggtccctctgggcag
tcacaccctcctcctccccaggctcatactaggtccaaatctcctagtggacagaaaagg
tcacggtcaagatctccccatgagcagggtttctgtgtttatttgaaaggtcttcccttt
gaatcggagaacaaacacgtgatagatttttttaaaaagctggatatagttgaagacagc
atttatatagcttacggacctaatgggaaggcaatcggagagggttttgtcgagttcagg
aatgaagctgattacaaagcagctttgtgtcatcataagcagtacatagggaatcgcttt
attcaagttcatccaattactaaaaaggcaatgttagaaaagatagatatgattcgtaaa
agattgcagaacttcaactatgaccagagagaaatactcatgaatgctgagggagagcca
ggcttgccaaaattgtgtgcgcatatatctaatattccatacaatataacaaaaatggaa
atccttcagtttctagagggactggcagtagaagaaaactctgtacaaatacttgttgat
aataacgggcaagggttaggacaagcactggttcagtttaaagctgaagatgatgctcgt
aaggcagagcgtttgcaccgtaaaaaactgaatggaagagatgttgttttgcgtttgata
actgtagaagaaatgagagatattgaaagaaacccaccatctcaagggaaaaagatacta
aaaataccgatacaaggaaatgcgactgtgccgggagcacaaggcactggtggggatgag
catgctttcttgggaaattctaaagatgcaaacaacggtcctccatttaatttccctggt
aacttcagtgggtctggcacatttggtcctcctctaccaccacctggaataggtggcttt
cctgattctagaccaggaatacctactgttgcaagtagcggtttgcctggtgcaggtatt
gaggtcccaggttttgcaggtggtcctggtaatttgagtggaccggcagcttttgcaggg
ggtcctcagacttttggtaatggtcctggcaatttaagtggaccccctgcctttggtgct
ggtcctccaggaattgctacaggtcttggacatttaagtggacctccagggtttggacct
ggaccaggaaatatacatattagtggacccccaggttttggaacagggtctgggaagcca
ggaccaactgtcattaaagtgcaaaatatgcccttcactgtttcggtggatgaaattttg
gatttcttttatggttaccaagtgatccctggttcagtgtgcttaaaatacaatgaaaaa
ggcatgcccactggagaagcaatggttgcattcgagtctcgtgatgaagctatggcagct
gttgttgacttaaatgacaggcctataggctctagaaaagtaaaacttatggccgggtgc
gtgtccagggtggagctgtcggtgacctgccggagcctcctcgacagggacctgggctcc
aggtccgaccccctctgcgtggtgctgcaggacgcgggcggcggccgctgggctgagctg
gatcgcacagagaggatcaagaactgccaaaaccccgaattctgcaagaaactggttgtg
gactactattttgagaaagtgcagaagctgaaattcggcgtgtatgatatcgataacaag
tcctttgatttaaatgacgatgactaccttggagggatcgagtgcacgctgggacaggtt
gtgtccagctcggtgttcacccgaccactggaattgaagcagggaaagccggcaggaaag
ggcaccattacgatttcagcagaggagattaaagataccagggttgtgtacttggaaatt
gaagcccgaaatttggacaaaaaggatttattaggtaaatcggatccatttttggagttt
tacaagcagagtgatgctggaacatggcagctggtgtacagatcagaggtgattaagaac
aacttaaatccatgctggaggaagttcagtgttcccttgcaaacattctgtggtggagat
tttaataaacctatcaaggtacagtgtgcagattacgacagcgacgggtcgcatgacttg
ataggcacttttgaaactaacctgactcagctgcagaaaggaggtgacggctctgcggtg
gaattcgaatgcattcatcctgagaaaaaacaaaagaaaaagagctacaaaaactctggc
attattaggataaaatcctgcaagaccgagacagaatattcgtttctggactacgtcatg
ggaggctgccagattaactttacagtgggcgtagacttcactggttccaacggagatccc
aggtcaccagattctcttcactacatcagcccagatgggataaatgagtacctgattgcc
atctggagtgtgggaagtgtagtccaggattatgacatggacaagctgtttcctgcgttt
gggtttggagctcagattcctcctagctggcaggtatctcatgagtttgctttgaacttc
aaccccagcaacccttattgtcaagggatccaaggaatagtggatgcctatcgccagatc
ctgcctcagatccgactctacgggccaaccaatttctctcctattataaaccacgtggca
agatttgcagcgcactcggcacaacaaggaactgcttcacaatattttatcttgctgatc
atcacagatggagagatcactgacctggaccaaactaggcaagcgatcgttaatgcctca
aagctgccgatgtccatcattattgttggagttggtgaagctgatttcaaagcaatggag
tttcttgacggagacaacggtgtcctgaagtccctgacaggagagccagctgcacgagac
attgttcagtttgtgcctttccgacagttcaaaaacgctccccgggaagcgctttcccag
atggttctggctgaagtgcctaagcagctggtgtcatactataaatggcagggatggcca
cccatgaaactgccggaaataaagatgatgtag

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