Charadrius vociferus (killdeer): 104287638
Help
Entry
104287638 CDS
T08577
Symbol
ABCA3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104287638 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvf02000
]
104287638 (ABCA3)
Transporters [BR:
cvf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104287638 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
RsgA_GTPase
DUF4162
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
104287638
NCBI-ProteinID:
XP_009884664
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MVLLRQFGLLLWKNYILQKRQILVTVIEICLPLLFAAILIALRHRVHSISHPNATIYPPE
SVDDLPGFFYRRHPSNPWELAYVPSNSSAVRSIAEAVERALPISIRAQGFASERDFEEYV
KSDNRSGSVLAAIVFKHRFPQSTAPLPLQVDYELRFKYSPRNAPRSESLFFFYVVLPKWF
LSFCQHLPPKPGPTSIPPYHFCRAGYIREGFLAVQHAVDRAIMQYHANASSTSLLENITV
VVQRFPYPAYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMHMMGLS
NWLHWSAWFLMFFLFLLVSVFFVTVLFCVQVSEQGAVLTNSDPTLVFTFLAIFSISSISF
NFMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLASCLISNVAMAMGAQ
LIGMFEGKGTGIQWRDLMKPVSVDDNFTVAQVLGMLLLDSALYGVVAWYVEAVFPGEYGV
PQPWYFFLTPSYWCGRPRTVVGKEKEEEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVF
KVGNKMKEAVKDLTVNMYEGQITVLLGHNGAGKTTTLSILTGLHSPTGGQAYINGYEISQ
DMVLIRRSLGLCPQHDVLFDNMTVEEHLHFYAGLKGYPPSKCPEEINHILRILNLEDKRH
SLTKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQQQRSNRTILLT
THFMDEADLLGDRIAIMAKGELQCCGSSLFLKRKYGAGYHMVMVKEPYCNLGEISRLICQ
YVPNATMESNAGAELSFILPKESTHRFEALFTELEQKREELGIASYGASVTTMEEVFLRV
GKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKL
NTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQFLVPLIFTAFALIVAKTFPGPRDSSLLR
LTLEPYGQTIVPFSISATSGLSQRLAEQYVELLDAQHQSPLEVLGGLEEYLISRASEEGG
AFNEHYITAASFEAAGNRTVVTALFNNQAYHSPATALMLADNAVFRVLAGPNASITVTNY
PQPRNITEKAKDQLMEGQTGFAIAINLLYGMASLASTFALLLVSERAIKAKHVQFVSGVY
VVNFWLSALLWDIINFLIPCALMLVIFQAFDVQAFTQDSHLVDVMLIFLLYGWAIIPLMY
LLSFFFSVAATAYTRLTIFNILSGTATFLAVTIMSIPELGLVDLSKTLDKVFLILPNYCL
GQCISDFYQNYEFIQFCTSSVEAIFICKAFNISYQMNYFSWETPGIGRYLTSLTIQGFSF
LFLLFLIETNLLWRLRTLVCGICRRRKWVALLNRVSVLPEDRDVADERKKVLESPPELLS
SLSSPLVIKELTKVYDSRESLLAVDRISLAVSRGECFGLLGFNGAGKTTTFKMLTGDESI
TSGDAFVDGHSILANIKKVQQRIGYCPQFDALLDHMTGRETLSMYARLRGIPERYIGSCV
ENMLRGLLLEPHADKLVRTYSGGNKRKLSAGIALIGGPPVIFLDEPSTGMDPVARRLLWD
AVTRTRECGKSIIFTSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLLAKT
RSEEEGELQAFKAFVEKTFPGSVLKHEHQGMVHYHLTNKNLSWAQVFGALEKAKEKYRLE
DYSVSQISLEQVFMSFTRFQHYTEDRGK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggttcttctcaggcagtttgggctgctgctctggaagaactacatcctgcagaaacgg
cagatcttggtgacagtcatcgaaatctgcctgccgctgctcttcgccgccatcctgata
gccctgcggcaccgggtgcactccatcagccaccccaacgccaccatctatccccccgag
tccgtggatgacctgccgggcttcttctaccgccggcaccccagcaacccctgggagctg
gcatacgtcccctccaacagcagcgctgtccggagcatcgccgaggcggtggagagagct
ttacccatcagcatcagagctcagggctttgcctcggagcgggacttcgaggagtatgtc
aagtcggacaaccgctcgggcagcgtgctggccgccatcgtcttcaagcaccgcttcccg
cagagcacggccccgctgcccctccaggtcgactatgagctgcgcttcaagtacagcccg
aggaacgcgccgcggagcgagtctttgtttttcttctatgttgttcttcccaagtggttt
ctctccttctgccaacatctccctccaaaacccggacccacctctattcccccgtatcat
ttttgccgtgcaggctacatccgagaaggtttcctggcggtgcagcacgcggtggacaga
gccatcatgcagtaccacgccaacgccagctccaccagcctgttggagaacatcacggtg
gtggtgcagcgcttcccctacccggcgtacgtcaacgacctcttcctcctcgccatccag
aaccagctgcccctgctgctcatgctcagcttcacctacacgtcgctcaacatcgtccgt
gctgtcgtccatgagaaggagaagaagctgaaggagtacatgcacatgatgggcctcagc
aactggttgcactggagcgcctggttcctcatgttcttcctcttcctcctggtgtccgtg
tttttcgtcaccgtgctcttctgcgtccaggtgagcgagcagggagcggtgctcaccaac
agcgaccccacactggtgttcaccttcctcgccatcttctccatctcctctatctccttc
aacttcatggtgagcaccttcttctcgcgagcaaacgtcgcggctgccgctggcggcttc
ctctacttcttctcctacatcccttacttcttcatctcgccccgctacgacctgatgtcc
cacagccagaagctggcctcctgcctcatctccaacgtggccatggccatgggggcacag
cttataggcatgttcgaaggaaaaggaaccggcattcagtggagggacctcatgaagccc
gtcagcgtggacgacaactttaccgtagcccaagtgctggggatgctgctcctggactcg
gcgctctacggcgtggtggcctggtacgtggaggccgtctttccaggggagtacggcgtg
cctcagccgtggtacttcttcttgacgccctcgtactggtgtgggcgccccaggactgtc
gtggggaaagagaaggaggaggaggaggaccctgagaaagcactgaagagccagtacatt
gaggaggaacctgccgaccttgtgtcaggaatcaaaataaagcacctttccaaggtcttc
aaagtgggaaacaagatgaaagaggcagtcaaggacctaacggtgaacatgtacgaaggg
cagatcaccgtcctgttgggacacaacggtgctggaaagaccaccactctgtccatcctc
acaggcctgcactctccgacgggcggacaggcctacatcaacggctacgagatctcccag
gacatggtcctgatccgccgcagcctgggcctgtgtccccagcacgatgtcctctttgac
aacatgacggtggaagagcacctccacttctacgcagggctgaaggggtacccaccctcc
aagtgccccgaggagatcaaccacatcctgaggatcctcaacctggaggacaagcgccac
tctctgaccaaggcgctctctggtggcatgaagcgcaagctctccattggcatcgccctc
attggggactccaaggtggtgatgctggatgagccgacgtcggggatggacccagcctct
cgcagggccacgtgggacctcctgcagcagcagaggagcaaccgcaccatcctgctgacc
acccacttcatggatgaggctgacctgctgggggaccgcatagctatcatggccaagggc
gagctgcagtgctgcggctcctcgctcttcctcaagcgtaaatatggggcgggatatcac
atggtgatggtgaaggagccctactgcaacctgggggagatctcccgcctcatctgtcag
tacgtgcccaacgccaccatggagagcaatgccggggcagagctgtccttcatcctgccc
aaggagagcacgcacaggttcgaggccctgttcacggagctggagcagaagcgggaggag
ctaggcatcgccagctatggcgcctccgtcaccaccatggaggaagtcttcctgagggtt
gggaagctggtggactccagcatggatatccaggccatccagctgcctgctctccagtac
cagcacgagagacgctccaacgactgggccatggatgactccagcagcttgagcggcatg
acagatatgacagacgacagtggagcgctcattacggaggactgctccagcatcaagctc
aacaccgggttctacctgtgctgccagcagttctacgccatgttcatgaagagagccatg
tacagctggcgcaactggaagatggtggcagcgcagttcctcgtgcctctgatcttcact
gcctttgccctcatcgtggccaagaccttcccgggacccagggactcctctctgctgagg
ctgacgctggagccctacggccagaccatcgtgcctttctccatctcggccacctcgggt
ctgtcgcagaggttggcggagcagtacgtggagctgctggacgcccagcatcagtcaccg
ctggaggtgctgggtggcctggaggagtacctcatctcaagagcctccgaggaaggggga
gccttcaacgagcactacatcacagctgcctccttcgaagcagccgggaaccgcacggtg
gtcaccgcgctcttcaacaaccaggcgtatcactccccggccacagccctcatgctggcc
gacaacgccgtcttcagggtactggcgggccccaacgcctccatcacagtcaccaactac
cctcagccccgcaacatcaccgagaaggccaaagaccagctcatggaaggccagactggg
ttcgccattgccatcaacttgctgtacggcatggcctcgctcgccagcaccttcgctctg
ctgctggtcagcgagcgggccatcaaagccaagcacgtccagttcgtcagtggagtctac
gtggtcaacttctggctttccgccctgctctgggacatcatcaacttcctcatcccttgt
gctctgatgctggtgatattccaagccttcgatgtgcaagccttcacccaagacagccac
ctcgttgatgtgatgctgatcttcctcctttatggctgggccatcattcccctcatgtac
ctcctcagcttcttcttctcggtggcggccacggcctacacccgtctcaccatcttcaac
atcctctcaggcacggccaccttcctcgcggtcactatcatgagcattccagagctgggc
ttggtggacctctccaaaaccctggataaagtctttctcatcttacccaattactgcttg
ggccagtgcatcagtgacttctaccagaactatgagttcattcagttttgtacctcctct
gttgaagccatcttcatctgcaaggcgttcaatatcagttatcagatgaactacttttcc
tgggagacacctgggatcggacgatacctgacctccttgaccatccagggtttctctttc
ctcttcctccttttcctcattgagacgaaccttctctggagactgaggactttggtctgt
ggcatctgcaggcggcggaaatgggtggcactgctgaacagggtgtctgtgctgccagag
gaccgggacgtggcagatgagaggaagaaggttttggagtcaccaccagaactgctgtca
tctctcagcagccctctggtcatcaaagagctcaccaaggtctatgacagccgggagtcc
ctgctggcggtggacagaatctccctggcagtcagcagaggggaatgctttggccttctc
ggcttcaacggagcgggcaaaaccaccaccttcaagatgctgaccggtgatgaaagtatc
acgtcgggtgatgcctttgtggatggtcacagcattctggccaacatcaagaaggtccag
cagcggatcggctactgcccgcagttcgatgccctcctggaccacatgacggggcgcgag
accctgagcatgtatgcccggctgcggggcatccccgagcgttacatcggcagctgcgtg
gagaacatgctgagggggctgctcctggagccccacgccgacaagctcgtgaggacctac
agcggtggtaacaaacggaagctgagcgctggcattgccctcatcggtggtccccccgtg
atcttcctggatgaaccctccaccggcatggaccctgtggcccggcgtttgctctgggat
gcagtgacacggacacgggagtgtggcaaatccatcatcttcacctctcacagcatggag
gagtgtgaggccctgtgcacgcggctggccatcatggtgaacgggcagttcaaatgcctg
ggcagcccccagcacctgaaaagcaaattcggcagcggctacaccttgctggccaaaacg
cgaagtgaggaggagggcgagctgcaggccttcaaggcctttgtggagaagactttccca
ggcagtgtcctgaaacacgagcaccagggcatggtacattatcacttgaccaacaagaac
ctcagctgggcacaggttttcggcgccttggagaaagccaaagagaagtaccgcctggag
gactactcggtgagccagatctccctggagcaggtcttcatgagcttcacccgcttccag
cactacacagaggacagagggaaatga
DBGET
integrated database retrieval system
