Charadrius vociferus (killdeer): 104287882
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Entry
104287882 CDS
T08577
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03420
Nucleotide excision repair
cvf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104287882 (ERCC4)
03460 Fanconi anemia pathway
104287882 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvf03032
]
104287882 (ERCC4)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104287882 (ERCC4)
DNA replication proteins [BR:
cvf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104287882 (ERCC4)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
104287882 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
104287882
NCBI-ProteinID:
XP_009884918
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MDLEEKTFKTSEFQQLGEKKMKKIDIVISSKTDSTLPPSRQQEYFIDQLRSDGVVHLPRR
VTNEITNNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGILVYKAHRIIESCQEAF
ILRLYRQKNKQGFIKAFTDNAVVYLWPRFHIAVNSFLEKHKPEVVEIHVSMTPAMLAIQT
SILDILNACLRELKRYNPALEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQD
LKILRTLLLYLTQYDCVTFLNLLESLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIA
DEKLNQKGKVSEKRDVKKENELKRELVLESNPKWEALREVLKEIENENNNSEDLGGPGQV
LICASDDRACAQLREYIIAGAEAFLTRLYNKTFGKDERAGEVWIKDKKAVKSKGNARPDT
GPQAKKAKLTASSKQNKHKKQQDQTIIQMIGKTEEEKQEELQVEDNKELSSSQESGIEET
IPEDFHVNLPSDCYYGIFKNPLTIIHPLQGCNDPYALTRVLHEVEPRYVVLYDAELTFVR
QLEIYKASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGR
DETNLDLIRDAKPASVSTDTRKAGGQEQKSVQQTVIVDMREFRSELPSLIHRRGIDIEPV
TLEVGDYILTPDICVERKSISDLIGSLNNGRLYTQCTSMSRYYKRPILLIEFDPNKSFSL
IPRGSLHQEISSNDVTSKLTLLTLHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAM
AVTADSEILPESDKYNPGPQDFLLKMPGINAKNCRALMNHVKSIAELVTLSKDKLTKILG
NAANATQLFDFIHLTYGEAISKGKSKR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggacctagaggaaaaaacatttaaaacttcagagttccagcaactgggagagaagaag
atgaagaaaatcgacatagtcatttccagtaagactgactccacgctgccaccatctaga
cagcaggagtattttattgatcagctgaggtcagatggagtcgttcatcttcctcggcgt
gttaccaatgaaattacaaataatactcgatatgaattttacacacaaggaggagtcatc
tttgcaacaagtcgaatccttgtggtggatttccttactgacagaattcctgcaaacctc
attactggcattttggtatacaaagcacacagaatcattgagtcctgccaggaagcattt
atcttgcgactttatcgccagaagaacaagcaaggcttcattaaagcttttacagataac
gcagttgtttatctgtggccaagatttcatatagcagtgaactcatttttagagaagcat
aaacctgaagtggtggaaatacatgtgtcaatgacccctgctatgcttgcaatccagact
tcaatcctggacattttgaatgcatgtctgagagaactcaaacgttataatccagctctt
gaagtagaagatctttctttagaaaacgctattggtaaaccttttgacaagacaatacgt
cactatttagatcctctctggcatcaacttggagctaagacaaaatctttggtccaggat
ttgaagatactacgtactttgctgctgtatctaactcagtatgattgtgtcactttcctt
aatcttctggagtcactgaaagccagtgaaaaagcttttggtgagaattcaggttggctg
tttcttgactccagtacttcaatgtttgtaaatgctcgagctagagtttatcgcattgca
gatgagaaactgaatcagaaaggcaaagtctctgaaaaaagggatgtaaagaaggaaaat
gaattgaaaagggaattggttctagaaagtaacccaaaatgggaagctttgagagaagta
ctgaaagagattgaaaatgagaataacaacagtgaagaccttggtggtccagggcaagtg
cttatttgtgccagtgatgaccgagcttgtgcacagctcagggagtatattattgctgga
gcggaagcttttttaacaaggctgtataacaaaacctttggaaaggatgagagagctgga
gaagtgtggattaaggacaaaaaagccgtcaagtccaaaggaaatgccagaccagacaca
gggcctcaagccaaaaaagccaaactcacagcttcttcaaaacaaaataaacacaagaag
cagcaagaccagactataatccagatgataggcaaaactgaggaggaaaagcaagaggag
ttacaggtggaagataataaagaattaagcagtagccaagaaagcggtatcgaagagacc
attcccgaagatttccatgtgaacttaccctcagattgttactacggtattttcaagaac
ccactcacaattattcacccgttgcagggttgcaacgatccctatgcactcactcgggta
ctgcatgaagtagaaccaagatatgttgtattatatgatgcagaactaacttttgttcgg
cagctggaaatctacaaggcaagcaggcctgggaagcctttgagggtttatttcctcatc
tatgggggctcaacagaagaacagcgctatctcacagctctcagaaaagagaaggaggcg
ttcgaaaaactcattcgagagaaggccagcatggtaattcctgaagaaagagaaggaaga
gatgaaacaaacttagacctaataagagatgctaaacctgcctctgtttctactgacacc
cgcaaagcaggtggacaggaacagaagagtgttcagcaaactgtaatagtggatatgcgg
gaatttcgtagtgagcttccatcactgattcatcgtcgtggcattgacattgagcctgtt
actttggaagttggagattatattttaactcctgatatctgtgtagagcggaaaagtatc
agtgatctgattggttccttaaataatggaaggctgtatacacaatgcacttctatgtcc
cgttactataagcgaccgattctcctgattgaatttgatcctaacaaatctttctccctg
attccacgaggctctctacatcaggaaatttccagtaatgatgttacttctaaactaact
cttcttacactccatttcccaaagttacgaatcctgtggtgtccctctcctcatgctact
gctgaactgtttgaagagttaaaacaaaaccatccccaacctgacgcagaaacagcaatg
gccgtcacagcagattctgaaattcttcctgagtcagacaaatataaccccggtccacag
gactttctattaaaaatgccaggtattaatgcaaaaaactgccgtgccttaatgaaccat
gttaaaagcattgcggagctagtgacactgtcgaaggacaaactcaccaaaattttgggt
aatgctgccaatgccacacaactctttgactttattcacctgacctatggagaggcaata
tctaaaggaaaaagcaaaagatga
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