Charadrius vociferus (killdeer): 104287929
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Entry
104287929 CDS
T08577
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104287929 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104287929 (TAF4B)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104287929 (TAF4B)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104287929 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
104287929 (TAF4B)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104287929 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Proteasome
Motif
Other DBs
NCBI-GeneID:
104287929
NCBI-ProteinID:
XP_009884964
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MSALTVGFDSSGSPELHQTDPSGTYPSWKVFVIDSSRTGTNMVNPSVYGLLTLEALPVGV
AAVLLEATGELCAAYRIVTARESQYEMYTSLYKIDYSRPMQSVAMPELAALQVSCNDYAC
FVRAVSCTSSLLSLSSDPALGAKVKRDNFVPFVLTGRRLLSRLFGLPASSAPFGCFSPTG
TVLIRSSNGQLMLVSQQAIARAQGEPQNNTTIRPSVPTSTPAIRICAVQNSGTQLLKKVT
ATPVKPLSQTKNAVASTVQPPAVIQPAAATASVTTVTAIKPLSTGTPVKLPVTGPPAQAI
SQKAVSVKAEGTTVAQTSASTEMLENVKKCKNFLATLIKLASSGPQASEMGQNVKNLVQN
LLEAKIEPEEFTKKLYVELKSSPQPYLVPFLKKSMLALRQLMPNAQSFIQQCMQQPAPTQ
DAVSTCASAAPAPSIAVATSTVATTSIPVTKSVSASVTVTATPVIKPVIASALATASLQT
VKPKPIPSSAVVTASLRPAASVLTTTIATSGLTTIHTVKPVFSSTVATSSLQSAKPLLVS
TAASSAATPLQPLKPVIGTPVSIKIPQPNSIVARSVGSQQVVKVKQLVVQQPSGTVVKQV
SALPQPSTLTLQTSAEKRMPLNTLVQTNQFPAGSILKQITLPGNKILSLQASPVQKAKIK
ENGPTSFRDEDDINDVTSMAGVNLNEENACILATNSELIGTVIHSCADDPFLSSDVLQKK
ILNIGKRHDIMELNSDVLNLISHATQERLRGLLEKLTVIAQHRVSTHKGSDRYIVSSDTR
AQLRFLEKLDQLEKQRKDEEEREMLLRAIKSRSSKEDPEQLQLKQKVKEMQQLELARMQQ
REANLTALAAIGPRKKRPLDSSNVGSGLEGLNGNGIAPGSSGFRLTKQLLCPRITRVCLR
DLIFCMEQEREMKHSLTLYHALLK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttgactgtgggcttcgatagcagtgggagtcctgaactgcaccagacagat
ccatctggtacctacccgtcttggaaggtttttgtaattgactcaagcagaactggaaca
aatatggtgaacccttcggtgtacggtctgctcacactagaagctctccctgtcggcgtt
gcagctgtcctgctggaagcaacaggcgagttgtgcgctgcgtatcgcatagtgacagcg
agggagtcccagtatgaaatgtacacaagcctctataagattgattacagcaggccgatg
caatcggtggcaatgccagaactggctgcgttgcaagtctcctgcaacgactacgcttgc
tttgtgagggcagtgagctgcacctcgtccctcctcagcctttcttcagatccagccctg
ggagccaaggtcaaacgagacaacttcgtccccttcgtccttacaggtaggcggctgctc
tctcgcctttttggcctgcccgcaagttcagctccgtttggatgtttttctccaacagga
actgttcttatcagaagcagtaatggccaactaatgctagtatctcaacaagcaatagca
cgagcacagggtgagccgcaaaataacacaaccataagaccgtctgtaccaaccagcaca
cctgcaatcagaatatgtgctgtacagaactccggcacccagttactaaagaaagtaaca
gctactccggtgaaaccattatctcaaacaaaaaatgctgtggcttctactgttcagcca
cctgctgtaatacagccagcagctgcaacagctagtgttactacagttactgctataaag
cctttgagtactggaacacctgtaaaacttccagttacaggaccacctgcacaagctatc
tcccaaaaggcagtctctgtgaaagcagagggcacaacagtagcacagaccagcgcttct
acagagatgctagagaatgtaaagaaatgcaagaattttctcgctacactaataaaactg
gcatctagtggacctcaagcctctgagatggggcagaatgtgaagaatctggtgcaaaat
ctgttggaagcaaaaattgaaccagaagaatttacaaaaaagctctatgtagagctcaag
tcgtctccacaaccctatttagttccttttctcaagaaaagcatgcttgctttacggcag
ctaatgcccaatgctcagagctttatccagcagtgtatgcagcagccagctccaacccaa
gatgctgtttcgacttgtgcctctgcagcaccagctccttcgatagcggtggcaacctca
actgtagcaacaacttctattccagttacaaaatcagtgtcggcctctgtaacagtcaca
gctactccagttataaaaccagtcattgccagtgcgttggcgacagcttctctgcagact
gtgaagcctaagcctattccttcctctgcagtggtgacagcgtctcttcggcctgcagct
tcagtcctcaccacaacgatagcaacatcagggctgactactatccatactgtcaagcca
gtcttcagctctaccgtagcaacatcctctctccagtctgcaaagccactactggtctct
acagcggcatcttcagcagcaacccctctccagcctctgaaaccagtcattggaacccca
gtcagtattaaaatcccacagccaaactccatcgtggcgcgttcagtgggttctcagcag
gtggttaaagtgaaacagttggtagtccagcaaccatcaggaaccgttgtaaagcaagtg
tctgcactcccgcaaccctcaacactgaccctacagacatctgctgagaaaaggatgccg
ctgaatacgcttgttcaaactaaccaatttcctgcaggttccattctgaaacaaatcacc
ctgccaggaaataaaattctgtcccttcaagcatctcctgttcagaaagctaaaataaaa
gagaatggaccaacatccttcagagatgaagatgacataaatgatgtgacttctatggct
ggggtcaatcttaacgaggagaatgcgtgcattttggcaacaaactctgagctcattggt
acagtgatccactcttgtgcagatgatccttttctctcttcggatgtgcttcagaagaag
atcttgaacataggtaaaaggcatgacattatggaacttaactctgatgttctgaacttg
atctcccacgctacgcaggagagattacgagggctcctagaaaaactaactgtaattgct
caacacagagtatcaacccacaaggggagtgataggtacattgtatctagtgacaccaga
gcacagctgagatttcttgaaaagcttgatcagctggaaaagcagagaaaggatgaagag
gaacgtgaaatgttgcttcgagcaatcaagagccgttccagtaaagaagatccagagcaa
ctgcagttaaagcagaaagtgaaagagatgcaacaattggagttagcacgaatgcaacaa
agagaagccaacctcacagctttggccgcaattggaccaaggaagaaaagaccattggat
tcatcaaatgttggatctgggctggagggtttgaacggcaatggaattgctcctggatca
tcaggttttagacttacaaaacagctgctctgtccaagaataacccgtgtctgtctcagg
gacttgatattctgcatggaacaagaaagggagatgaagcattctctaaccttgtaccat
gctcttctgaagtaa
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