Charadrius vociferus (killdeer): 104288019
Help
Entry
104288019 CDS
T08577
Symbol
ASCC3
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104288019 (ASCC3)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104288019 (ASCC3)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104288019 (ASCC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
AAA_19
Helicase_PWI
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
104288019
NCBI-ProteinID:
XP_009885057
LinkDB
All DBs
Position
Unknown
AA seq
2202 aa
AA seq
DB search
MALPRLTGALRSFSNVTKHEDYSEELADLTIKRSKLHEQLLKSDLTWKKIIKFVDDNLDK
KEHQTVNSDLKTILQAAKQIVGAENGQEAIESGAVFLFKTFHRKNCVGHDETKAIKQMFG
PFPSSSATAACNATCRIASHFTEEQLTALIQMAEEQNGDNRVFFGKNIVFSFDMHDLDHS
EELPVNGEADAQKIISLDYNKFLNNQLNHLQNHCEEKSDLKSLEKVDDSFLWCEVGKYLN
ESQGGTPGGPTTEDLCCTLYEMLASTKSGDELQNELFELLGPEGFELIEKLLQKRSLILE
RSLTCPNDNRFQTLQEQCKKFIGENAKPNYGCQVTIQSEQEKLLMKQYRREEKRNARKEK
QAGEDGEVSGEGLMCFDPKELRMQRELALLNARSMPVLSRQREMDFEKIHYPHVYDSRAE
AMKTSAFIGGAKVFLPEAVQRENNKMYEEVKIPHSEPMPIGIEEKIVYIKDLDEIGQLAF
KGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHVQHGVIKKDEF
KIVYVAPMKALAAEMTNYFSKRLEPLGITVKELTGDMQLSKGEILRTQMLVTTPEKWDVV
TRKSVGDVALSQLVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATL
PNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFIGIKTTNKVQQLNHMDEVCYENVLKQ
IMAGHQVMVFVHARNATVRTAMGLREKAKNNGHICHFLSPQGSDYGQAEKQVQRSRNKQL
RELFPDGFSXXXXXMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIY
AAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFL
ESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPGLEKHRE
QLVIEVGRKLDKARMIRFEERTGFFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDI
LAIVSKAEEFEQIKVREEEIEELDTLLNDFCELPAPGGVENNYGKINILLQTYISRGEMD
SFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWVSPLRQFS
VLPPSVLSKLEEKNLTVDKMKDMRKDEIGHMLHHVKIGLKVKQCVHQIPSIIMEATIQPI
TRTVLRVRLNIAPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFIIQKKQVITKEPQ
LLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPIT
ALGHREYEVLYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYP
TSKAVYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKW
DGVSRSWQNRSYVQKVSILIIDEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLST
ALANARDLADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRS
HSPAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLKMDEREMNDIIVTVRDSNLKLT
LAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGK
TRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLEVL
ADHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNLDDVSHDTMNKYLSSLVEKS
LFDLECSYCIEIGEDNRSIEPLTYGRIASYYYLKHPTIGMFKDQLKPESNIEELLLILTN
ADEYTDLPVRHNEDQMNSELAKHLPIEVNPHSFDSSHTKTHLLLQAHFSHAMLPCPDYAT
DTKTVLDQAIRICQAMLDVAAHHGWLVTALNITNLVQMVVQGRWIHDSSLLTLPNIELHH
LYLFGVPGGYQGPIECLPELMAACEGKENVFASIVESELQTAHISQAWNFLCRLPILNVS
LSIKGCWDDPVQPQNEVPVPALTTDTRDDKRWIKLHADQEYVLQIYLQRTQMGYQGKQDS
KAVAPRFPKAKDEGWFLILGEVDKKELIALKRTGYIRNRNTVSVAFYTPETPGKCIYTLY
LMSDSYLGMDQQYDIYLNIIPASTSAQGTTEVSDAMSHLALK
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcctcgtcttacaggcgctttacgctccttttcaaatgtcactaaacatgag
gattacagtgaagaattagctgacttaacgattaaaagatcaaaactacatgagcagttg
ctgaagtctgatcttacttggaagaagataataaagtttgttgatgacaatttggacaaa
aaagaacaccaaactgtaaatagtgatttaaaaactatattgcaggctgcaaaacaaata
gttggagctgaaaatggacaagaagcaattgaaagcggagctgtttttctctttaagaca
tttcacaggaaaaactgtgttggccatgatgagacaaaggcgatcaagcagatgtttggg
ccatttccatcatcatctgctactgcagcttgtaatgccacatgtcggattgcttctcac
ttcactgaggaacagcttacagccctcatacagatggctgaagagcaaaatggtgataac
agagtgttctttggtaaaaatatagtgttttcatttgacatgcatgatttggatcactct
gaggagctgcctgtgaatggtgaggccgacgcgcagaaaattataagcttagattataac
aaatttctgaacaaccagttgaatcacttacagaatcactgtgaggagaaatctgatctc
aagtctctggaaaaagtagatgattcttttttgtggtgtgaagttggaaagtatctgaac
gaatctcaagggggtacccctggagggccaacaacagaagacctctgctgtactttgtac
gagatgcttgcttctaccaaaagtggtgatgaacttcaaaatgagttgtttgaactgcta
ggccctgaaggttttgaactcatagagaaacttctacagaaaagatctctgattctggaa
agatctttgacttgtccaaatgataacaggttccagactctgcaagaacaatgcaagaag
tttataggagaaaatgctaagcccaattatggttgtcaagttacaattcagtctgaacaa
gaaaagctgttaatgaaacagtatcgtcgggaagaaaagcgaaatgccaggaaagaaaaa
caagctggggaagatggagaagtttctggagaaggactaatgtgctttgatcccaaagag
ctgaggatgcaaagagaactagcacttttgaatgctcgaagtatgccagtcctaagtaga
cagagagagatggactttgaaaaaattcattatccacatgtttatgattcccgagctgaa
gccatgaaaacatcagcattcattggaggtgcaaaggtgttcttaccagaggcagttcag
agagaaaacaataaaatgtatgaagaggtgaagatcccccatagtgagccaatgcctatt
ggtattgaagagaaaattgtttatattaaagacttagatgagattggacaacttgctttt
aaaggtatgaaaagactaaaccgaatccaatctatagtttttgagactgcctacaacaca
aatgagaacatgctaatctgtgcccctactggagctgggaagactaacattgccatgctg
acagtccttcatgaaattcgccagcatgtccagcatggtgttatcaaaaaggatgagttt
aagattgtgtatgtcgctcctatgaaggctttggcagctgaaatgacaaattacttcagc
aagcgtctggaaccactaggcattactgtgaaagagttgactggtgatatgcaactgtca
aaaggtgaaattctgcgaacacagatgcttgtgactactccagagaaatgggatgtagtg
acaagaaaaagtgttggtgatgtcgccctctcgcagctggtaaaactcttgattcttgat
gaagttcatctgttgcatgaagacagaggacctgtacttgaaagtatagtagcacgtaca
ttacgtcaggttgaatctacacaaagtatgattaggattttgggcctttcagctacatta
cccaattatcttgatgttgctacgtttctacatgtcaatccctgcattggactgttctac
tttgacggccgtttccgacctgtaccactggggcaaacctttatagggattaagacaacc
aataaggtgcagcagctgaatcatatggatgaagtatgttacgaaaatgtgctgaagcaa
ataatggctggacaccaggtgatggtgtttgttcatgctagaaatgccacagtacgaact
gctatgggtctccgagaaaaagcaaaaaacaatggtcatatctgtcactttttgtcaccc
caaggatcggattatggacaagctgaaaaacaggtacagagatccagaaataagcagtta
cgtgagctgtttccagatggatttagtnnnnnnnnnnnnnnaatgctgcggcaagacaga
agtttggttgaaaacttgttttctaatggacatatcaaagtcctagtttgtacagctacg
ctcgcctggggtgtcaatcttcctgctcatgctgttgttattaagggaacacaaatatat
gctgcaaaaagaggctcctttgttgaccttggaattttagatgtcatgcagatatttggt
cgagctggacggcctcaatttgacaaattcggagaaggcatcattattacaactcatgat
aaactcagtcattacctgactcttcttactcagcagaatccaattgaaagccagtttctt
gaaagccttgcggacaacctaaatgcagagattgctcttggaacagtaactaacgtggaa
gaagcagtaaagtggataagttacacttatctttatgtacggatgagagcaaatccatta
gtatatggcatcagtcacaaagcttatcagatggatccaggtctagaaaagcacagagaa
caattggtaattgaagtcggcagaaaactggacaaagcccgcatgattcgctttgaagaa
cgaactggctttttttcttcaacagatttaggcagaactgccagccactactatattaaa
tacaatactatagagactttcaatgaattgtttgatgctcataaaacagaaggtgatatt
cttgctatagtatcgaaagctgaagaatttgagcagataaaggtaagagaagaagaaata
gaggagctggataccttactgaatgatttctgtgaacttcctgctccaggaggtgtggaa
aacaattatggaaaaataaatatcctccttcaaacatatattagcagaggggagatggac
agcttctcccttatttcagattctgcgtatgttgcacagaatgcagctcgtattgttcga
gctctttttgagattgcccttaggaaacgttggcctgcaatgacatatcgactactgaat
ctcagcaaagtcattgacaagcgactgtggggctgggttagccctttgagacagttctca
gtgttaccaccatcagtcctctcaaagttggaagagaagaatctcactgtagacaagatg
aaggacatgaggaaagatgaaataggtcatatgctgcatcatgtgaagattgggttaaag
gtaaaacagtgcgtccatcaaattccctccatcataatggaagcaacaattcagccaatt
acccgcacggtgctccgcgttcggctgaacatcgctcctgatttcacatggaacgatcag
gtacatggcactgttggagagccctggtggatttgggtagaagaccctactaatgatcac
atttatcattcagagtacttcatcattcaaaaaaaacaggtcattactaaagaacctcaa
ctgctggtgttcacaatcccaatttttgaacctcttccttctcaatattacattcgagct
gtgtccgatagatggctaggagcagaggctgtatgtatcataaattttcaacatttgatt
cttccagagagacatccacctcacacagagcttctagatcttcagcctttgcctatcaca
gccttgggacatcgggaatatgaagtcctgtacaaattcacgcacttcaaccctatccag
acccagatatttcatacactttatcacacagactgtaatgttcttcttggagcgcctaca
ggttctggaaaaactgttgcagctgaattagccatctttagggtttttaacaagtatcct
acatcaaaggcagtgtatattgcacccttaaaagcacttgttcgtgaaagaattgaggac
tggaaagttaggattgaagaaaagcttggtaaaaaggttgtagagttgacaggagatgtg
actcctgatatgagagctattgcccaagctgacctgattgttactaccccagagaagtgg
gatggtgtcagcagaagctggcagaacagaagctatgttcagaaagtttccattcttatc
atagatgagatccatctgctgggggatgagagaggcccggtattggaagtcattgtgtct
cgaacaaacttcatctcatctcacacagagaagcctgtaagagtagttggtttatccact
gctttagcaaatgccagagacctggctgactggctaaatattaatcagatgggtctgttc
aacttccgaccatcagtacgcccagttcctctggaggtgcacattcagggcttccctggc
cagcattactgtcctcgcatggctagcatgaacaaacctgcatttcaggcaattcggagt
cattctccagccaagcctgttcttatttttgtgtcatccagacgtcagacaaggcttact
gccttagatctgatagctttcctagccaccgaggatgatcccaaacaatggctgaagatg
gatgaaagagagatgaatgacattatagtgacagttagagattcaaatctgaagctgaca
cttgcttttggaataggcatgcaccatgcgggtctgcatgaaagagacaggaaaaccgtg
gaagaattgtttgtgaactgcaaaatccaggttcttattgccacaagcacattagcttgg
ggtgtaaattttccagctcatttagtaattgttaaaggaacagaatactatgatggaaaa
acaaggcgttacgtggattatcccattacagatgtacttcagatgatgggacgtgctggc
agaccacagtttgatgaccaaggaaaagctgtaattctagttcatgatattaagaaagac
ttctacaaaaaattcctttatgaacctttccctgtggaatcaagcttgttagaagtgctg
gctgaccacttgaatgctgaaattgctgctggaactattacctctaagcaggatgcaatg
gattatatcacctggacttatttcttccgtcgacttataatgaacccaacttactataac
ttggatgatgtgagccatgacactatgaataagtacctctcaagccttgttgagaaatcc
ctctttgatttggaatgctcctactgtattgaaattggggaggataatcgcagcattgaa
cctctgacatacggtcgcattgcttcctattactatttgaagcatccaactattgggatg
ttcaaggaccagttgaaacctgaaagcaacattgaagaattgctcttaattctgacaaat
gctgatgagtacacagatctgcctgtgagacacaatgaagatcagatgaacagtgaactg
gcaaaacatcttccgattgaagtcaatccccattcgtttgacagttcacacacaaaaaca
catctcctgctgcaagcccacttcagtcatgccatgctgccttgtccagattatgcaact
gatacaaagacagtgctggaccaagcaattagaatatgtcaggcaatgctggatgttgca
gcacatcatggctggttggtgactgctctgaatataaccaatctggtgcagatggtggtt
cagggtagatggatacatgactcttccctgcttactttgcccaatatagagctacaccat
ctttacctttttggggtgcctgggggttaccaaggacccatcgagtgtcttcctgaacta
atggctgcctgcgaaggaaaagagaacgtttttgcttccatcgtggagagtgaattgcag
acagcacacatttcacaggcttggaacttcttgtgccgtttgccaattctaaacgtcagc
ctgagcattaagggctgttgggatgacccagttcagccgcagaacgaagtgcctgttcct
gctttgacaacagacacgcgagatgacaaaagatggatcaaattacacgctgatcaagag
tatgtgctccaaatatatctgcagagaacccagatggggtatcagggaaagcaagacagt
aaagcagtggctcctcgattccctaaagctaaagatgaaggatggtttttgatactggga
gaagttgataaaaaagaactcatcgccctgaagagaactggatatatcagaaatcgaaat
actgtttctgtcgctttttatactccagaaactcctggaaagtgtatctacacattgtat
ctgatgagtgacagttaccttggcatggaccaacagtacgatatttacctgaacatcata
ccagctagtacgtcagcacaaggcaccacagaggtgtccgatgctatgagtcacctggct
ttgaagtaa
DBGET
integrated database retrieval system
