Charadrius vociferus (killdeer): 104288094
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Entry
104288094 CDS
T08577
Symbol
BOP1
Name
(RefSeq) LOW QUALITY PROTEIN: ribosome biogenesis protein BOP1
KO
K14824
ribosome biogenesis protein ERB1
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvf03009
]
104288094 (BOP1)
Ribosome biogenesis [BR:
cvf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104288094 (BOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BOP1NT
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104288094
NCBI-ProteinID:
XP_009885149
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MEPRGGMKPPVRWGQLPDIRNTVGNIPMEWYQDFPHIGYNLEGKKIYKPIRNKDELDMFL
EKMENPDYWRTVQDKMTGADIKLTDEQVDLVHRLQKGQFGDVHFNPYEPAVDFFTHEVMI
HPVTNRPADKRSFIPSLIEKEKVSKLVHAIKMGWIKPRKPKDDTPTYYDLWAHEDPNSIL
GRHKMHVPAPKMKLPGHEESYNPPPEYLLSEEEVRGVLERPGDTGRCWAPQQYRCLRAVP
AYSRFIHERLERCLDLYLCPRQRKMRVNVDPEDLIPKLPKPRDLQPFPTTQALVYRGHTS
LVRCLSISPSGQWLVSGKDSLPRRRITEWLELGGALKAIAWNPNPTVCLVAISVEQSVLL
LHPCLGDKLLYGATDQLLESYVAPEEERVQPVQWVTATMEEHSKGIRLVVQHSKAVKQVT
WHGKGDYFASAVSSDNSNMQVLIHQTSKRWSQNPFRKSKGLVQCVLFHPIRPYFFVATQR
YVRIYNLLKQELTKKLMTNCKWVSSMAIHPGGDNIICGSYDSKLAWFDLDLSTRPYQLLR
HHKKALRSVAFHKHYPLFASGSDDGTVIVCHGMVYNDLLQNPLLVPVKVLKGHVMTLDLG
VLDVLFHPTQPWVFSSGADGTVRLYT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaggggagggatgaagccaccggtgcgttgggggcagctgccggacattcgc
aacacggtgggcaacatccccatggagtggtaccaggacttcccgcacatcggctataac
ctggagggcaagaagatctacaagcccatccggaacaaggatgagctggacatgttcctg
gagaagatggagaaccctgactactggcgaacggtccaggacaagatgacaggtgcagac
ataaagctgacagacgagcaggtggacctggtgcatcgcctccagaaagggcagtttggg
gatgtccacttcaatccctatgagccggccgttgacttcttcacccatgaggtcatgatc
cacccggtgacgaatcgcccagcggacaagcggagcttcatcccctccctcattgagaag
gagaaggtctccaagctggtccatgccatcaagatgggctggatcaagccccgcaagccc
aaggacgacacccctacctactatgacctctgggcccatgaggatcccaactccatcctg
ggccgccacaagatgcacgtcccagcacccaagatgaagctgcctgggcacgaggagtcc
tacaaccccccacccgagtacctgctcagcgaggaggaggtgaggggggtccttgagcgg
ccaggagacacgggaaggtgctgggcaccccagcagtaccggtgcctgcgggcagtacct
gcctactcccgcttcatccacgaacgcctcgagcgctgcctggacctctacctctgcccg
cgccagaggaaaatgcgggtcaacgtggaccctgaggacctgatccccaagctgccgaag
ccgcgggacctacagcccttcccgaccacccaggccctggtctaccgtgggcacaccagc
ctggtgcgttgcctcagcatttctcccagcgggcagtggctggtgtcaggtaaggattcg
ctcccgaggcgtagaatcacggaatggttagagttgggaggggccttaaaggccatcgcc
tggaaccccaaccccaccgtctgcctggtggccatctctgtggagcagtcggtgctgctg
ctgcacccctgcctcggggacaagctgctctacggggccaccgaccagctgctggagtcc
tacgtggcgccagaggaggagcgggtccagcccgtgcagtgggtgacagccaccatggag
gagcacagcaaaggcatccgactggtggtccagcacagcaaggctgtgaagcaggtgacc
tggcacggcaaaggtgactactttgccagcgccgtgtcttctgacaacagcaacatgcaa
gtgctgattcaccagaccagcaagcgctggagccagaaccccttccgcaagagcaagggg
ctggtgcagtgcgtcctcttccaccccatccgcccctacttcttcgtggccacccagcgc
tacgtccgcatctacaacctcctcaagcaggagctcacaaagaagctgatgaccaactgc
aagtgggtgtccagcatggccatccaccctggaggagacaacatcatctgcggtagctac
gacagcaagctggcctggttcgacctggacctctccaccagaccctaccagctgctgcgg
caccacaagaaagcgctgcggagcgtggccttccacaagcactacccgctcttcgcctcg
ggctcggacgacgggaccgtcatcgtttgccatggcatggtctacaacgacctgctgcag
aacccgctgctggtgcccgtgaaggtgctgaagggccacgtgatgacattggacctgggt
gtcctcgatgtgctcttccaccccacccagccctgggtcttctcctccggcgccgacggc
accgtccggctctacacgtag
DBGET
integrated database retrieval system
