Charadrius vociferus (killdeer): 104288143
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Entry
104288143 CDS
T08577
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104288143 (ZC3H12C)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104288143 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
104288143
NCBI-ProteinID:
XP_009885204
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MSVCFPVNEYGTLYIQEYKKNSKVESSTCSSFMGLKDHLGHDLGHLYVGSTGTQINAIVP
WSMAEKPTMDKVNSRKEDVDKEASEETSGSSSCDSEESTNSDNDSERLNNSASESHLLPK
THRQLCRSPCLEPHILKRNEILQDFRIEEAQIVPKEVKKPPDVVKEYQTKLEFALKLGYS
EEQVQLVLNKLGTDALINDILGELVKLGNKTDTDQTVTNANTTVMREASSIESQRSESPL
QEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRK
EQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSND
NYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQ
PCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRAMSRSTAAKTTSEGGLVKSNSVPCST
KNDGTSELKRATPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPSSSAAKPQS
TAPLTNGLPSGVLFPPQDQRPQGQYPTVMMATKNHGTPMPYDQYPKCESPVDVGYYSMLS
AYSNLSMSGPRSPERRFSLDTDYRISSVASDCSSEGSVSCGSSDSYVGYSDRSYMSSPDP
QLEENLKCQHMHPHGRLNTQPFLQSYHEPLTRVQSYSHEEPKHHHKPPIPYMAVHLQHPT
VSARSSCPNDYSTSQSSSHSKTMHLGRALVSTRIDSISDSRLYDNSPLRHRKPYSGQDGL
GSWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQFAFQSLPEQQDQTWRVPYCGIPQDPPRH
QDTREKVYINLCNIFPPDLVRIVMKKNPHVTDAQQLAAAILVEKSQLGY
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtgttttccagtgaacgaatacgggacactttatattcaggaatacaagaaa
aacagcaaagtggagtcaagtacatgcagcagcttcatgggcttgaaggatcatctgggg
catgacttaggccacctttatgtggggagcactggcacacaaataaatgcaattgtacct
tggtcaatggcggagaagccaacgatggataaggtgaattctaggaaagaagatgtagac
aaggaggcatctgaagagacttctggaagctccagctgtgactctgaagaaagcacaaat
tctgataatgattcagagagactgaataattctgcatcagaatcacatttattgcctaag
actcaccggcagctgtgccgatctccttgcttagagcctcatatactaaaaagaaatgaa
atcttgcaagactttaggatagaagaggctcagatagtacctaaggaagtcaaaaagccc
cctgatgtagtgaaagagtatcaaaccaaactggagtttgcacttaagttgggttactct
gaagagcaggttcaacttgtactaaataaacttggtactgatgctttaataaatgatatt
ttgggagaacttgtcaaacttgggaataaaactgacactgatcagactgtaactaatgct
aacactactgtaatgcgtgaagcgtcttccatagagtctcagaggtcagagtctccactg
caggaggatgtgacagaggatggtgacaacctgaggccaatagttattgatggcagcaat
gttgcaatgagccacgggaacaaagaagtattttcttgtcgaggaatcaaattggcagta
gactggtttttggagagaggccacaaggatgtcacagtgtttgtgccagcatggaggaaa
gaacagtcgagacctgatgctcttatcacagatcaagaaatcttgcgtaaattagaaaag
gagaagattcttgtgtttacaccatcccgacgagtgcaagggagaagggtggtatgctac
gatgaccgatttatagtgaagttggcctttgagtcagatggcatcattgtttctaatgat
aactacagggatttagctaatgaaaagcctgaatggaagaagttcatagatgaacgcttg
ctgatgtactcatttgttaatgacaaatttatgcctcctgatgatcctcttggccgccat
ggtccaagtctggacaattttcttaggaagaagcctattgtgccagaacataagaagcaa
ccgtgtccatatgggaagaaatgtacctatggacacaaatgcaaatactatcatccagaa
agaggaaatcagcctcagcgatctgtagctgatgaacttcgtgccatgtctagaagcaca
gctgccaaaactacaagtgaaggaggactggtaaaaagcaatagtgttccctgtagcact
aaaaatgatggcacttctgagctgaagcgtgctactccaaagaggcaatcggatcctagt
ataaggactcaagtctatcaagacttggaggaaaagcttcccaccaaaaacaaattggaa
accaggtctgtaccttctttagttagtataccaagttcctctgctgcaaaaccccaaagt
accgcacctttaactaacggccttccatccggagttctcttcccacctcaggatcaaaga
ccacagggacagtatcctacagtgatgatggcaaccaaaaatcacggaacgccaatgcct
tatgaccagtatccaaaatgtgagtctcctgtggatgtagggtattactctatgctgagc
gcgtattcaaatctaagtatgtctggtccacgtagtcctgaaaggcgcttctccttggac
acagattataggattagctctgtagcttctgactgcagcagcgaagggagcgttagctgt
ggcagtagcgattcctacgtgggttacagcgatcgctcttacatgagttcgcctgaccca
cagctagaagagaacttgaagtgccaacatatgcacccccatggccgccttaacactcag
cccttcctacagagctaccatgaacctctcacgcgagtgcaaagctatagtcatgaagaa
ccaaagcatcaccacaaacctccaattccgtacatggctgtgcatctacagcatccaaca
gtcagtgctcgttctagttgtccaaacgactactctacatctcagagttcgtcacattca
aagacaatgcatctggggagagccctcgtgtccacgagaatagacagcatttcagactca
cgtttgtatgataactctccattaagacacagaaagccttattctggccaagatgggctt
ggaagttgggataggcagagttacgggatggatgcgtatggctaccgccagacctactcc
ttgccgagtaaccccacgcagccgtgttatgagcagtttgctttccaaagcttacctgaa
cagcaggaccagacctggcgcgtaccttactgtggaatccctcaagaccctccaaggcac
caagacacccgggagaaggtttacataaatctctgcaacatcttcccccctgatcttgtg
aggattgttatgaagaagaaccctcacgtcacggacgctcagcagctcgctgcagccatc
ttagtggaaaaatctcagctaggttattga
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