Charadrius vociferus (killdeer): 104288430
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Entry
104288430 CDS
T08577
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104288430 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104288430 (SUPT6H)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104288430 (SUPT6H)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104288430 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104288430
NCBI-ProteinID:
XP_009885540
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRGQKFRRV
RKMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEY
EYEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQL
RSIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIK
EALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKF
GLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIARE
PLVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLA
EEEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQ
FLYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGI
RVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKF
LLNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKS
ENEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALY
CEFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVT
MCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDES
AEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRT
PYRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCP
FCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKV
GMTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRK
QQRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQ
HVDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGD
KKKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQ
VFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNM
TSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTP
SYSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAE
QWLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtagaaagtgaagcggaggagtcagaggaggagtacaaccaagatggg
gaggttgtacccagagtaaccaagaagtttgtagaggaagatgaggacgacgaggaagag
gaggaggagaatctcgatgatcaagatgagcaggggaacctgaaaggattcattaacgat
gacgacgatgaggaagaggaagaggaggaagaagccagcgactctggagactctgaggac
gatgttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggtgttaaagtcaaaagagggcaaaaattcaggcgtgtg
cgaaaaatgtccgatgatgaggatgacgaagaggaagactatggaaaagaagaacatgag
aaagaagccattgctgaagaaatctttcaggatggtgaaggcgaggagggaggggaagct
gttgaagctcctgttgctccaccagaagaggaagaggaggaggaggaagatgaatctgac
atcgatgacttcattgtggatgacgatggacaacctctgaagaagccaaaatggcgaaag
aagctccctggatacacagatgccgctttgcaggaagcccaggaaatctttggtgtggac
ttcgactatgatgagtttgagaagtacaacgagtacgatgaggagatggaggaggaatat
gagtatgaggatgaagaagccgaaggggagacacgtgtacgacccaaaaagactgccaag
aagcgcgtcagtcggcgtagcatctttgagatgtacgagcctagtgagctggagagcagt
cacctaacggaccaggataacgagatccgcatgacagacatgcctgagaggttccagttg
cgatccatcccggtgaagagtgctgaagatgatgagctggaggaggaagctgactggatt
tacaggaacgcatttgcgacacctaccatctccttgcaggaaagttctgactacctcgac
cgtggacaagccagcagcagcttcagccgtaaggggcccagcaccatccagaagattaaa
gaagccctaaatttcatgagaaatcaacattttgaggtcccattcatcgccttctacaga
aaggagtatgtggagccagagctgcacatcaatgacctgtggagggtctggcagtgggat
gagaagtggacccagctgaagatccgcaagcagaacctgacacgtctctttgagaagatg
caggcctatcagtacgaacaaatctctgctgacccagacaagcccttggcagatggaata
agagccctggatactactgacatggagaggctgaaggacgtgcagtccatggacgagctg
aaggacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaac
gctgccaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaggaa
ggtgaaggggaggatgccgaagatgatgagcagaaagggcctgagctgaagcaggcttcc
cgtcgggatatgtacaccatctgtcagacagctgggctggatggcctagctaagaagttt
ggtctgacacctgagcagtttggagagaatctccgagatagttaccagcgtcacgagaca
gagcagttccctgcagagcccctggagctcgccaaggattatgtgtgtagtcaattccca
agccctgaagctgtgctggaaggagcccggtacatggtggctttgcagatagccagggag
cctttagtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttca
ccaaccaaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatac
ttgaaaaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggca
gaggaggaggcactgctcacaatagatatcagcattgacatgaaaggagtggagggttat
ggcagcgaccagacgtactttgaggaaatcaaacagttctattatcgggatgagttcagc
caccaggtgcaggagtggaatcggcagcgtacgatggctattgagcggtccctcaaccag
ttcctctatgtgcagatggctaaagagttgaagaacaagctgttggtggaggccaaggag
tatgtcctcaaggcttgcagccggaaactgtacaactggctaaaagtagcttcataccgt
cctgatcagcaggtggaggaagatgatgatttcatggatgaaaaccaagggaaagggatt
cgggtactaggcattgcattttcctcagccagggaccaccccgtgttttgcgccctcgtt
aatggagagggtgaggttacagacttcctccgattgccgcatttcacaaaaagaaggaac
gcctggcgtgaggaagagagggaaaagaaggcccaggatattgaaactttgaaaaaattc
ctcctgaacaagaagcctcacgtggtgacaatcgcaggcgagaacagggatgctcagatg
ctgatggaggatgtaaagagaattgttcatgagctggatcaagggcagcagctgtcctct
attggagtggagctggtagacaatgaactggccatcctctacatgaacagcaagaagtct
gagaatgagttccgcgattacccacctctgctgcgccaagccgtctcccttgctcgccgc
attcaggaccccctcatagagtttgcccaggtctgcagctccgatgaggatattctctgc
ctaaaactccaccctctgcaggagcatgtggtgaaggaggaactgctgaatgccctctac
tgtgaattcataaaccgtgtgaacgaggtgggagtggatgtcaatcgggcgattgcgcac
cctcacagccaggctttgctgcagtacgtgtgtggcctgggaccacgcaaaggcactcac
ctgctaaagatcttaaaacaaaacaacacgcgtctggagaacaggacccagctggttacg
atgtgtcacatgggacccaaggtgtttatcaactgtgctggcttcatcaaaattgacaca
gcatcgctgggcgatagtaccgattcctacattgaagtcctagatgggtctagggtccat
cctgaaacctacgaatgggcaagaaaaatggcagtggatgccttagaatacgatgagtcg
gcagaggatgctaatcccgcaggagctctagaggagatcttagaaaacccagaacgtctg
aaagacctggatctcgatgcttttgctgaagaactggaaagacagggctacggtgacaag
catatcactttatacgacattcgagctgaactaagctgccggtacaaggacctgagaacc
ccataccgttctccaaacacagaagaggtcttcaatatgctgaccaaagaaactccagag
actttttatataggtaaaatgatcatctgcaatgtgactgggatagcccacaggcggcca
caaggagaaagctatgaccaggcaatacgaaatgacgaaactggcctttggcagtgtcct
ttctgtcagcaggataacttcccagagctcagcgaggtttggaaccactttgacagcggt
tcctgcccaggtcaggccattggagtgaagacacgtctggataatggcgtcgctggcttc
atcccaacaaaatttcttagcgataaggtggtcaagcgaccagaagaaagggtgaaggtg
ggaatgaccgttcactgcaggattatgaagatcgacattgagaagttcagtgcagacctg
acctgcaggacctcggacctgatggataagaacaatgagtggaaactgcctaaagacacc
tactatgactttgactctgaggcagcagatcacaaacaggaagaagacatgaaaagaaag
cagcagcggacaacatacatcaagagagtaattgctcacccgtcattccacaacattagc
ttcaagcaagctgagaagatgatggagaccatggaccaaggggatgtgattattcggcca
agtagcaaaggggagaaccacctcactgtcacctggaaggtgaacgatgggatttaccaa
catgtggatgtccgagaagagggcaaggagaatgccttcagcctcggctccacactttgg
attaacacagaggagtttgaagacctggatgaaattgttgctcgctatgtccagccaatg
gcttcttttgccagagacctgttgaatcacaaatactatcaggactgcaacggcggagac
aagaagaagctggaagagctgctgataaagaccaaaaaagagaagccaacatttattccc
tactttatcagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcga
ggcaaaccgaggatagagtatgtgacagtgacgccagaaggattccgctaccggggccag
gtcttccctaccgtgaacggactctttcgatggtttaaggatcattatcaggaccctgtt
ccaggtattacgcccagcagtagcagtcggaccaggactccagcctccattaatgctact
ccagctaacattaacctggcagacctgacccgtgcagtgaatgctctaccgcagaacatg
acctcccagatgttcagcgccatcgctgctgtgacaggccagggacagaacccaaatgcc
acccctgcgcagtgggcatccagtcagtacggctatggaggcagcggaggtggcagcagc
gcgtaccacgtcttcacaactccagcacagcaaccggtggccacccctctgatgaccccc
agttactcctacactacccccagccagccgattacgacgccccagtaccagctccaggcc
aacaccacaccccagtccacccagtcccagacgcagtcccagccatcgtccagctccagg
cagaggcagcagccaaagaccaacagtcacgctgcgatcgactgggggaagatggccgag
cagtggctccaggagaaggaggctgaacggaggaaacagaagcagaggttgactcctcgc
ccgtctcccagccccatgatcgagagcacgcccatgtccatcgctggggacgccacaccg
ctgctggatgagatggatcgatag
DBGET
integrated database retrieval system
