Charadrius vociferus (killdeer): 104288629
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Entry
104288629 CDS
T08577
Symbol
ARHGEF5
Name
(RefSeq) rho guanine nucleotide exchange factor 5
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104288629 (ARHGEF5)
Membrane trafficking [BR:
cvf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104288629 (ARHGEF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
104288629
NCBI-ProteinID:
XP_009885757
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MDSGIECTLSKFPKNTKVMLGGLYSQQQQQKELKEFSMFLGLDHKQLMVLTSEARYKVQV
SAVGIAVMADEVVLVEVVSMNVSLMESEETSEGGTAPPEAGSTTGEAWDSAAIEREHHAP
HTSAEMSTSPSDSAKGAELNTPKDCHSAPGEAAEMLGRPSKPLEKAPAGLKQKQGDAEPQ
KGLSELEEVLLEEGGLDYSRKLKQVELADLESNQDSSSPSTVQDVPAPGNAILQAVDLST
EFPQCQAERAFHGSDPQAQHPKSPLADAISSQRETPKCFLVCKTVSEGHYKAEPFLDKIS
TDSLQEVGADVEQKQSSNIVPPATDEQPTSEEAVEDMGKPYTSEDAKESIRALQGLEENT
ESSSSHQLLSTLTDDSQISSLQVEGKIPAGETGNSSMVKDQGTVMVPKENSSASKCLHLE
DDHRKTEGRPASPAAHTFQVKDTAKKIEELNTSQHKEPAEDETVSELQQEEKKKECKEQN
LPEDGKSFECKDQKNKEQNEQEQLQREELKLEEELKLEALSSAFTLQRSCVLRHNVDLCD
LENAFLTEQTGSAFPPGEPVSVGHHPGEDVLLKACVTEAGSGCQPPAVSPLSSNNLNPVG
EASVAPPQTCRISDQAEDLADSGRFSISGQDVGEADWDDRTRLGKEDEHSDRYGNAVQRF
YKRDAPFHGEVAAPSSAENPEASVPAHPSSGTKNLEPPDPIDPHLVTENLVKAELQDFVP
ALPSKLTSVASASGPQQEGANLTAFVTPKDCPGANLNKLLDSVEKPANHAASVQVQDATS
GETAIVSTDPGGGNTSCELLTSEEGFHEEFSGPSSFSVIHTSCLPLEGSLPEDRRTVAII
ARPLEAPQTPGRTSTPLNQPETIQQKPTEKSAIIQGKGIGANVDHEAQQMPLLDQSDCSL
NQKEPGSRISSVLSTLIWPSEEDMVLAGSQQEQPLSPVSHLSLPLVSEPDAKQLPHPPSH
VQSPSQPQACALSANHLAQPPALESYQPLAPVPHSRPHLNCGMDNNKLLAIHPTIIHPLR
TAASNAVASASDGEDVAEKGDLVPVTRECNLGDSGTHDTETSDDSGVSLLAKSSSAIGNE
ALASGCDTSPETTDQHVDIQRGKSSPDHPSWPSLEGLITSTDSKSRNSAQPLPMLAFTNP
IHFLQLSPPSPPTTRTTCQEEEVSGELRWEQQAGIFGVDTKNIQAPLAITEKTEDERRVK
QRLEVEGEHHWVPQPKEEIPRHSPLEKSSSWPDKKTVIAQEPAVNQENTIKRRVKSKDWH
RQGLKRSSVPPDILQEIPSVPSEEEAHKAHKEPPVSSETVTLREKKPADAMENFKRRHSK
LINSSRLLYQEYSDVVLNKAIQSQKRVDSFAEDIESSFPSSPRLRRKVLSPQDSYLQRLS
VSSNASLWQDIPMIRGSRILLNMSRDEQKLQEAKFELIISEASYLRSLNVAVDHFQRSAE
LQAMLTNQERQWLFSRLHDVRDVSASFLFDLEEKFEEDIFTFHVCDVALKHAPEFRRVYL
PYVTNQTYQEQTFQRLLNGNAGFQQVLERLESDPVCQRLSLKSFLILPFQRITRLKLLLQ
NILKRTRPGSEEEVQATQAYDALEKLIKDCNENVQRMKSTEELIYLSQKIEFECKIFPLI
SQSRRLVKCGELTALDFNTLSPKWKVTTRPIYLHLFNDCLLLSRPKEGGRFVVFDHAAFS
DVRGEKCEVKLHGTNKNVFRLFLLQNNQGKRVEFLFRTETHSEKLRWISALAPPRGELDL
LECPDAPQVQCIKTYKARENDELALEKADIIMVMQYSNDGWMEGVKLSDRERGWFPSEHV
ELISSKHARQKNLKEEQRVKNAKQQVFCKK
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgggattgagtgcaccctcagcaagtttcccaaaaacaccaaggtgatgttg
ggtggtctgtacagtcagcagcagcagcagaaggaattgaaggagttctccatgttttta
ggactggaccataaacagttgatggtactaactagtgaagccagatacaaggtacaggtt
tctgctgtaggtatagctgttatggctgatgaagttgtgctggtagaagttgtgagtatg
aatgtatcactgatggagtctgaagaaaccagtgagggaggtactgctcccccagaagcc
ggcagcaccactggggaagcctgggattctgcagcaatcgaaagagagcatcatgcccct
cacacgtcagctgaaatgagcaccagcccatctgactctgcaaagggagcagagcttaac
actcccaaggactgccattctgctccaggggaagcagcagagatgttgggcagaccctct
aaacctctggaaaaagcaccagcaggactgaagcaaaagcaaggtgatgcagagcctcaa
aagggactctcagaattggaagaagtgcttttagaggagggtggactggattattctcgg
aaacttaagcaagtagagctggctgacctggaaagcaaccaggactcttcctctcccagc
actgtccaggatgtgccagctcctggcaacgccatcctgcaggctgtggacctcagcact
gagtttcctcagtgccaggcagaacgggcttttcatggctcagaccctcaggcccagcat
ccgaaatctcctttggcggatgccatttcctctcagagagagacacctaagtgcttcttg
gtgtgtaaaactgtttcagaggggcattataaggctgaaccgtttctggataagatctcc
acagattctttgcaggaggttggtgctgatgtagagcagaagcaaagcagcaacatagtg
ccaccagcaactgatgagcagcctacctcagaggaagcagtagaggacatgggtaaacct
tacacttctgaagatgctaaggaaagcataagagcactccagggtttggaagagaataca
gagtcttcctcttcccatcaattgctttccactttaacagatgacagccaaataagttcg
ctacaagtagaaggaaagatcccagctggtgaaacagggaatagcagcatggtcaaagac
cagggaacagtaatggttcctaaagaaaactcatctgcttccaaatgccttcatcttgaa
gatgatcacagaaaaacagagggcagacctgcatctccagcagcgcataccttccaagta
aaggatactgctaaaaaaattgaggaattgaatacttcacagcataaggaaccagcagag
gacgagacagtgtctgaactgcagcaggaagagaagaagaaagagtgcaaagagcagaat
ctgccagaagacggaaaatctttcgagtgcaaagatcagaaaaacaaggaacaaaatgag
caggaacaactgcagagggaagagctcaaattggaggaagagctcaaactggaggcccta
tcatcagctttcacattacagagatcttgtgttctcaggcataatgtggatttgtgtgat
ttggagaatgcttttttgactgagcaaacaggttcagcatttcctcctggggaacctgtc
tctgtgggtcatcatcctggtgaggatgtactgctgaaagcttgtgtcacagaagcaggt
tctggatgtcagccgcctgctgtcagccctctgtcctcaaataacctgaacccagtgggt
gaagcatcagtggcacctccacagacctgccgtatctctgaccaggcagaagacctagca
gactctggccgcttttccattagtggtcaggatgtgggagaagctgactgggatgacagg
acaagactgggcaaggaggatgagcatagtgacaggtatggaaatgctgtccagaggttt
tataaaagagatgctccattccatggagaagtggcagcaccttctagtgcagagaaccca
gaggcttctgttccagcacacccttcctctggtaccaaaaacttggagccacctgatcct
atagatcctcatcttgttacagaaaatttggtaaaagctgagcttcaggacttcgttcca
gctttaccctcaaagctcacttctgtggcttcagcatctggcccacagcaagagggtgct
aatttaacagcctttgtaacccctaaggactgtcctggtgccaacctgaacaaactgctg
gactctgtagagaagccagccaaccacgctgcttctgtgcaagtgcaggatgcaacatca
ggggaaactgctattgtaagtactgatccaggggggggcaacacttcctgtgaactccta
acttctgaggaaggctttcatgaagaatttagtggcccatcttctttctccgtaatacac
acgagctgtcttcctctagaggggagccttcctgaggataggaggactgtggctatcatt
gcacggcctctggaagcaccccaaacaccaggcagaacttctactcccctgaaccagcca
gagacaattcagcaaaaacccacagaaaaaagtgccattattcaaggaaaaggaatagga
gcaaatgtggatcatgaagcacaacaaatgcctttacttgatcagtctgactgcagttta
aaccaaaaagagcctggatccaggatctccagtgtcctgagcacccttatttggccctct
gaagaagatatggtccttgctggttcacagcaagaacaacctctgtcccctgtgtctcac
ttaagcctacctctggtgtctgagcctgatgccaaacagcttcctcatcccccttcccat
gtccaaagccccagtcaacctcaggcctgtgcactaagtgcaaatcaccttgcccaacct
ccagcccttgaaagttatcagcctctggctcctgtgccccactccaggccacatctcaac
tgtggtatggacaataataagttactagccattcaccctactataatccatcctctccgg
actgctgcctctaacgctgtggcctctgcttctgatggagaggacgtagcagagaaaggt
gaccttgttccagtaactagagagtgtaatctcggtgactcaggtacccacgatacagag
acttctgatgactcaggggtcagtttgttggccaaaagctcttctgctattggaaatgag
gcgttggccagtggctgtgacaccagccctgaaacaacggatcagcatgtggatatacag
cgtggaaaatcctcacctgatcacccttcttggccctcgctggaaggcctgataacatcc
acagactccaagagcagaaactctgcacagccacttccaatgttagcattcaccaatcca
atccactttctccaactcagccctccatcaccaccaaccaccagaacgacctgccaggaa
gaggaggtctcaggagagctgcgatgggagcaacaggcaggcatctttggtgtggacacg
aagaacatccaagctccattggcaatcacagagaaaacagaagatgaaaggagggtcaag
caaaggctggaagtagaaggagaacaccactgggtacctcagccaaaggaggaaataccc
agacattcacccttggaaaaatcgtcaagttggccagacaaaaaaacagtcattgcacag
gagccagcagtcaatcaagaaaacacaattaaacgccgagtgaaaagcaaggactggcat
cggcagggcctgaagaggtcatcagtaccaccagacatcttgcaggaaatcccttctgtt
ccttcagaggaagaagctcacaaggcacacaaggaaccaccagtcagctcagaaacagtt
acattgcgagagaagaaacctgcagatgcaatggagaacttcaaacgtcggcactccaaa
ctgatcaactcctcaagattgctttatcaggagtacagtgatgtggttctcaacaaggcc
attcaaagccagaagagagtggattctttcgcagaggatatagagtcaagtttcccaagc
tccccaaggctacggaggaaagtgctgtctccccaggactcgtatttgcaacgtctgtca
gtctcatctaatgcgtccctctggcaggacatccccatgatacgaggcagcagaatacta
ctcaatatgtcccgtgacgagcagaagctgcaggaggccaagtttgagttgataatatct
gaggcgtcatacctgcgcagtttaaatgtggcagtggatcacttccagcgatcagcagag
ctccaggcaatgctcaccaatcaagagcgtcagtggcttttctcccgccttcatgatgta
cgcgatgtcagtgccagtttcctctttgacttggaggagaaatttgaggaggacatattc
accttccacgtgtgtgatgtggctctgaaacacgcccctgagttccgcagggtgtatcta
ccatatgtaacaaaccagacatatcaggagcaaaccttccagcggttactaaatggaaat
gcagggttccagcaagtcctggagagactggaaagtgatccagtatgccagcgcctctcg
cttaaatccttccttatcctccctttccagcgtatcactcgactcaaactcctcctacag
aatatcctgaagagaactcggccggggtctgaggaggaagtgcaggcaacacaggcctat
gatgcacttgaaaagctcatcaaggattgcaatgaaaatgtccagcgcatgaagagcact
gaagagctgatctacctcagccagaagattgaatttgagtgcaagatattcccactcatc
tcacagtcgagacgacttgtgaagtgtggtgagttgacagcactggacttcaacactctg
agtccaaaatggaaagtcaccacccgtcccatctacctacatcttttcaatgactgtctg
ctcctgtctcggcccaaggagggtggacgttttgttgtgtttgatcacgctgctttctca
gatgtccgtggggagaagtgcgaggtgaaactgcatggaacaaacaaaaatgttttccgt
ctctttctacttcagaataaccagggaaaaagagtggagtttttgtttcgtacagagaca
cacagtgagaagctgaggtggatctctgctttggctcctccgcgaggagaactggacctg
ctggaatgccctgatgcaccacaggttcaatgcataaagacttacaaggctcgggaaaat
gatgagctggctttggagaaagcagatatcatcatggttatgcagtacagcaatgacgga
tggatggaaggagtaaaactttcagaccgggagagaggctggttcccctcagaacacgtg
gaactcatctccagcaaacatgcacggcagaagaacctgaaggaggaacaacgtgtgaag
aatgccaagcagcaggtcttctgcaaaaaataa
DBGET
integrated database retrieval system
