Charadrius vociferus (killdeer): 104288699
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Entry
104288699 CDS
T08577
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cvf01100
Metabolic pathways
Module
cvf_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104288699 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvf01003
]
104288699 (CHSY1)
Enzymes [BR:
cvf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
104288699 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
104288699 (CHSY1)
Glycosyltransferases [BR:
cvf01003
]
Glycan extension
O-Glycan
104288699 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
104288699
NCBI-ProteinID:
XP_009885847
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MGWQAGSRWPGRVLIPLATWSKTIPGKVEFFSSEGSDTSIPIPIVPLPGVDDSYPPQKKS
FMMLKYMHDHYLDKYEWFMRADDDVYIKGDKLENFLRSLNSSEPLFLGQTGLGTTEEMGK
LALEPGENFCMGGPGVIMSREVLRRMVPHIGECLREMYTTHEDVEVGRCVRRFAGVQCVW
SYEMQQLFYENYEQNKKGYIRDLRNSKIHRAITLHPNKNPPYQYRLHSYMLSRKIAELRH
RTVQLHREIVLMSKYSNTEIHKDDLQLGMPPSFMRFQPRHREEILEWEFLTGKYLYSGAD
GQPPRRGMDSSQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYVL
DLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFMEHEEMDSKELASKINQDSGSLSFLSN
SLKMFVPFQLSRSKVERKELKDKKINILIPLSGRFDMFARFMGNFEKTCLIPNQNVKLVV
LLFNSNSNPDKAKQIELMRDYRSKYPKADMQVLPVSGEFSRALALEVGSSQFQNESLLFF
CDVDLVFTTEFLQRCRANTVLGQQVYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWR
NYGFGITCIYKGDLLRAGGFDVSIQGWGLEDVDLFNKVIQAGLKTFRSQEIGVVHVHHPV
FCDPNLDPKQYKMCLGSKASTYGSTQQLAEIWFEKNDPNFGKSSNTNGSVRTA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaggcgggctctcgctggcccggccgggtgctgatcccactggcaacgtgg
tccaaaaccattcctggcaaggttgaattcttctccagtgagggttcggacacctctatt
cccatccccatcgtgccgcttccaggtgtagatgactcttacccaccccagaagaaatct
ttcatgatgctcaaatacatgcatgaccactacttggacaaatatgaatggtttatgaga
gctgatgatgacgtttacatcaaaggggacaaactggagaacttcctcagaagtttgaac
agcagcgagcccctctttcttggccagactggcctcggcaccacggaggagatggggaag
ctggcgctggaaccaggcgagaacttctgcatggggggaccaggagtgatcatgagccgg
gaagtcctgcggagaatggtgccacacattggcgagtgcctgcgagagatgtacaccacc
catgaggacgtggaagtgggaagatgcgtacggaggtttgcgggagtgcagtgtgtctgg
tcctatgagatgcagcagctcttttatgaaaattatgagcagaacaaaaaaggttatatc
cgagacctgagaaacagcaaaatacacagagctataacactgcaccccaataagaacccc
ccgtaccaatacagacttcacagctacatgttgagccgcaagatagcagagctccgtcac
cggactgtacagctgcaccgggaaattgtcctgatgagcaaatacagcaatacagaaatc
cacaaagatgacctgcagctggggatgccgccatccttcatgcgattccagccccgccac
cgggaagaaatcttggagtgggagtttcttacgggaaagtatttgtattcgggtgccgat
gggcagcccccgcggaggggaatggactcttctcagcgtgaagcgttggatgacattgtt
atgcaggtcatggaaatgatcaacgccaacgctaagacccgggggaggatcatagatttc
aaggaaatacagtatggctatcgcagagtaaatccgatgtacggagcagagtacgttctt
gacttgttgcttctgtacaaaaagcataaggggaagaagatgaccgtccccgtcaggagg
cacgcgtacttgcagcagacgttcagcaagatccagtttatggagcacgaagagatggac
tccaaagagctggccagcaaaatcaaccaggattctggatccttgtctttcctctccaac
tcgctgaagatgtttgttcccttccagctcagccgatcaaaagtagagaggaaggaactc
aaagacaagaagatcaacatcctgattcctctctccggacgttttgacatgttcgcaagg
ttcatggggaattttgaaaagacgtgcctcattccaaaccagaacgtcaagctggttgtc
ctgcttttcaattccaactccaaccctgacaaagcgaagcagatcgagctgatgagagat
taccgctccaaataccccaaggctgacatgcaggttttaccggtgtcgggggagttctcg
agggcgctggctctggaagtcggatcttctcagttccagaacgagtctttacttttcttc
tgtgatgttgacttggtgtttaccacagaattcctccagcggtgtagagccaatacagtt
ttgggtcaacaagtatactttcccatcatttttagccagtatgatccaaagattgtttat
agtggaaaagttcctagtgacaatcattttgccttcacccagaaaacaggtttctggagg
aactatggctttggtattacctgtatttacaaaggtgatcttcttcgagcgggtggcttt
gacgtctccatccaaggttggggcctcgaagacgtagacctgtttaacaaagtcattcaa
gctggcttaaaaactttccgaagccaagaaattggagtagtccatgtgcatcaccctgtt
ttttgtgaccctaatcttgatccaaaacaatataaaatgtgcttggggtccaaagcttca
acttatgggtccacacaacagctggctgaaatatggtttgaaaaaaacgacccgaatttt
gggaaaagcagcaatactaatggctcagtgaggacagcctaa
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