Charadrius vociferus (killdeer): 104288718
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Entry
104288718 CDS
T08577
Symbol
ABCA12
Name
(RefSeq) ATP-binding cassette sub-family A member 12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf02010
ABC transporters
cvf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104288718 (ABCA12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104288718 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvf02000
]
104288718 (ABCA12)
Transporters [BR:
cvf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104288718 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
DUF4162
AAA_15
Motif
Other DBs
NCBI-GeneID:
104288718
NCBI-ProteinID:
XP_009885869
LinkDB
All DBs
Position
Unknown
AA seq
2513 aa
AA seq
DB search
MFQLAVTNLKLSPEFGVVYKNSSERFSKELSCIIQSLQFSLSFLSKLNFISKLENSWVQE
KAGALTALMEGLLQSNASCPIPVQDVGGVLPSQLLNMLIPFMLNETVLNSLNISDSLAGW
NNMSMLFSVAQDELYVNDLLQRLQGAFNLTKWSYYTSVWNVVNSLLNTKRNLTDVAAFAK
LLEAVANNSANNVSALEFTEASHYILKRLNFSDLLNEFNISSISTFLSKKTSFDNVIAIV
AHDFVVMAETLYNKTLPWTQSDQTLSPTSLITRFLFLEFENTILQVTVNNSYNPYLMCLI
NAAEVEDSKLTENITLLLKQTNLKKNPFMQNNTSEKHSSIPELLKLKISHLRGLTTLLCD
YESFKSIQHICHLPNVSFGELCEQSQSHEQLLRAMELSNQVVTNVLNHRRIFQELQNILI
GDATNIQTQMKWFQENVPELAFFQEIPQYMATLNSLLNITENLTDSGKQEKLRDVFKNVD
QLKEELKNTTGMSTASIDALLEAPLPENGSQLISQILQLESCSIRPADPHLQTVAEEFCN
LSLSERTRETYILGVTLLRHLDVYNFLYKMFFPKELQKSVDKMLDLLTKMKYFRDQVESG
VDPLLQAIHSLKKLRQSRNVPLTKALFKPNNFRITRGTFKSMSKVLCNQDITPLFFESLL
PDFGDPVSNSSSVEDVYVQKMIRKYGIPHDSTPFCLSFYLDLVKTPTGALIWSFLKPMVL
GKILYTPDTIETRAIMEKSNATLKQMADLALKSQEWLDKSPVIMNSLAKLNQTVPMIKNT
LQNPFVQVFIKLMVDLDAAELLSQINELDDIRLELQNNADIVDQLNTLATLAVNVSSCVS
FNRIHAVRNIEEMEMMAKELFLKNELFASIIFKLPPSHSSPGRSVRGDLAFPPVLNYTIR
MSSRITQTTNRIRERIWTVGPHNSTSQSQIYSRAFIYIQDSIERAYIELQTGKNPEEIAV
QVQAMPYPCYNKDMFLTSVTYSLPFALMAAWVLFIADFVKTLVQEKDLRLYEYMKMMGVN
ASSHFIAWFIECAIFLLITVTFLIIVLKVGDILPKTNTALLFLYLMDYSLSIIAMSYFIS
VFFNNTNIAALVGSLVYILTFFPFIVLLVIENHLSFSVKSLLSLLSPTAFSYASQYIARY
EAQGIGLQWDNMYKSPMIGDNTSFGWMCWLILIDSFIYFILGWYIRNVFPGRYGMAAPWY
FPLLPSYWVEYNGYLPFWNEKRRGFLFTKLMLRKEATLNNKICAPPPHLEPEPTDLTLGV
SLRGITKIYGSKAAVDNLSLNFYEGNITSLLGHNGAGKTTTISILTGLFPTSSGTIFVYG
KDIRTDQEVIRKNMGVCMQHNVLFNYLTTKEHLLLYGYIKVPHWSKQELYQEVKRTLKET
GLYSHRHKLAGSLSGGMKRKLSIAIALLGGSRVVILDEPTTGVDPCSRRSIWEIISKNKK
GRTIILSTHHLDEAEVLSDRIAFLEHGGLKCCGSPFYLKETFGDGYHLTLTKKKNMIEEC
DTTAVTSLIQSHLPEAYLKEDIGGELVYVLPPFKSTVSGAYQALLRALDSSLSDLNLGCY
GISNTTVEEVFLNLTKELGKDQQEVAELPQQLPGSSGQTGSDETSMSTDTFTERDDQLLI
RSKSLQGLPLLLKKTSALFIKRFHHTRRDVRGFIAQVILPVLFVMAAMGLGTLRTKETEY
PELILSPSLYGTSDQADFFGNFNETTDALVSSMLAFPGTDNTCMNESNSQCLKEDMLGQW
IISGNQRTKYSDCNCTNGIQTCPQTNYTPPHRRTFSTRTLYNLTGHNVETYILATTKDFL
QKRYGGWSFGLPLTTDLQFDIRPVPPNRTLTKVWYNPEGYHSLPAYLNSLNNFILRANLP
KNETSRYGIFLSAHPYPGGQSQEQVMLNSLLDIIVSMSVLVGYSITTASFVLYVVKEHQT
KAKQLQHISGIGMTSYWVTNFVYDLVLFMVPIGLSIGVISSFQIPAFCNNNNLLAVFLLL
LLFGYATFSWMYLLAGFFKETGMAFIVYVCVNLFFGINTIITHSVVFLLSQEKATDQGLH
DLAENLRHVFLLFPQFCFGYGLIELSQDQALLGFLKAYGVDYPDKTFELDKTTSKLFAMF
IQGTVFFAIRLTVHDRMIQRVWNNILEFLFDRVHGKALLLSPASEEDGDVQAERNRVESG
KADFDVVQLQNLTKIYHLPHKRIMAVKNISLGVPTTQCFGLLGVNGAGKTTIFKMLTGDI
GASSGRLRVQDHSGSLNDISEAHWSLFGYCPQEDALDDLLTVEEHMYYYARLHGIPEREI
KGVVLQLLHRLNLMAYKDRVTSMCSYGTNRKLSTALALIGNPSILLLDEPSSGMDPNAKR
HLWKIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGSFQCIGSLQHIKSRFGRGFTV
KMHLNSNTVNTEMLTEFMKSHFPNTCLKDRHFNMVEYHVPVSAGGVANIFDLLEVSKAAF
NIRHFSVSQTTLEEVFINFAKDQADPDGADADPDVTLDSSDTSSQDSTISSIY
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcttgctgtaacgaacctgaaactgtctccagagtttggtgttgtctacaag
aatagtagtgaacgcttttccaaggagctgtcatgcatcatccagtctctgcagttttct
ctgagtttcctttccaaattaaacttcatctctaaactggaaaactcttgggtacaggag
aaagcaggagctctgactgctctgatggaggggctgctgcagagtaacgcctcctgcccc
atcccagtccaagatgtgggtggtgtgctcccgtctcagcttttgaacatgcttattcct
ttcatgctgaatgaaacagtactgaactccctaaatatctctgacagcttagcaggctgg
aataacatgtccatgctcttcagtgtggcacaggatgagctctacgtgaacgacctgttg
cagagacttcaaggcgccttcaacctcaccaaatggagttattacacaagtgtatggaat
gtggttaacagtttgctaaacaccaaaaggaatctaaccgatgtggctgcctttgcaaag
ttattggaagcagtggcaaacaactctgccaacaatgtgtcagctctagaattcacagaa
gccagtcactacattctcaagaggctgaacttctctgatctgctaaatgaattcaatata
agttccatttcaacttttctctccaagaaaactagttttgacaatgtgattgctattgtt
gcgcatgactttgttgtcatggcagaaaccctgtacaacaagaccttaccttggactcag
agtgaccaaactctgtcaccaaccagtttgatcacacgatttctgtttttagaatttgaa
aacaccatcttacaggtgacagtgaataacagctataacccttacctgatgtgtttaata
aatgccgctgaagttgaagacagcaaattgacagaaaacatcaccctgcttttgaagcaa
actaatctgaaaaagaacccttttatgcaaaataatacctctgagaaacattcatccata
ccagagctcctgaagctaaaaatatctcacctccggggtttaacaacacttctttgtgac
tatgagagctttaagtcaatacagcatatttgccatctccctaacgttagctttggagaa
ctgtgtgaacaaagtcaatctcatgagcagctcctccgtgctatggaactgagcaatcaa
gttgtgaccaatgtactgaatcacagaagaatcttccaagagcttcaaaatatactgatt
ggggatgccacaaacatccagacacaaatgaagtggtttcaagaaaatgtaccagaactt
gctttctttcaagagattcctcagtatatggctactctgaattccctgttgaacatcact
gagaatttaacagattctgggaagcaagaaaagttaagagatgtgtttaaaaatgtggac
cagctcaaagaggagctcaaaaacacaacaggaatgtccacagccagtatcgatgctctt
ctggaagcacctctcccggaaaacggcagtcagctcatttctcagatcctccagctggag
tcttgtagcatccgtcctgctgacccacacctgcaaacagtagcggaggagttctgcaat
ctctctctttcagagagaactcgtgagacgtacatcctgggggtcactctgttacgacac
ttagacgtttacaatttcttatacaagatgtttttccctaaggaacttcagaaatccgtg
gacaagatgttagaccttctgacaaaaatgaaatatttcagagaccaggttgagtctggc
gttgatccattgctacaagctattcattcactgaaaaagctccggcagtctagaaatgtg
ccactgactaaggcattatttaaaccaaacaactttaggataacacgtggcacattcaag
tccatgtcaaaagttctctgcaaccaggacatcacacctctgttttttgagtccttgctt
ccagattttggagaccctgtaagcaacagttcttctgtggaagatgtctatgtccaaaag
atgataaggaagtatgggattcctcatgactccacaccattttgcttatccttttacctg
gacctggtcaagacaccaactggagctttaatctggtcttttttaaaaccaatggtgctt
gggaagatcctttatacaccagataccatagaaactcgagcaatcatggagaagtctaat
gcaaccctgaagcagatggctgatctagccctgaagtcccaggagtggttggacaagtct
cctgtcatcatgaattcactggctaagttaaaccagacagttccaatgatcaagaacacg
cttcagaatcccttcgtgcaggtttttatcaagctgatggtggatttggatgcagctgaa
ctgctgagtcaaataaatgagctggatgatattcggctggaattacagaacaacgctgac
attgtcgatcagctgaatacattagctacccttgctgtaaatgtgtcctcctgtgtctca
tttaatcgcattcacgcagtcagaaacatagaggaaatggaaatgatggctaaagagctc
tttctgaagaatgagcttttcgcaagtatcattttcaagctgcctccaagccatagcagc
cctggacgctcagttcgtggggacttggcctttcctcctgtgctcaattacaccatccga
atgagcagcaggatcacgcaaaccaccaacagaataagggagcgcatctggacagtgggt
ccgcacaattccacttcgcagagccagatttacagccgggcgtttatttatatccaggac
agcattgaaagagcctatattgagttacagactggcaagaatccagaggaaatagctgtt
caagtccaggccatgccttacccctgctacaataaggatatgttcttaaccagtgtgacc
tactctcttccatttgctctgatggctgcctgggtgctgtttatagctgattttgttaaa
acacttgttcaagaaaaagatctgaggctttatgagtacatgaaaatgatgggtgttaat
gccagcagccatttcatcgcctggttcatagagtgtgccatcttccttctaattaccgtc
accttcctcattattgttctaaaagtgggtgacatccttcccaaaacaaacacagctctc
ctgttcctgtaccttatggactacagcctgtccattatagccatgagctacttcatcagt
gttttcttcaataacaccaacatagcagccttggtgggcagtcttgtgtacatcctcacc
ttcttccccttcatcgtgttgctcgtcatcgagaatcacttgagcttctctgtgaagagc
ctactgagtctgttgtctccaactgcgttcagctatgcaagtcaatacattgctcgatat
gaggcacagggcataggtctgcagtgggacaacatgtataagtccccaatgattggagac
aacacttcctttggctggatgtgttggctcattctgatagactctttcatttacttcatc
ctgggatggtatataaggaatgttttcccaggcagatacggcatggctgctccctggtat
ttcccattgctcccgtcttactgggttgaatacaatggttacctccccttctggaatgag
aaacgaagaggctttctcttcaccaagctgatgttaaggaaagaagcaaccctcaacaat
aagatatgtgccccccctcctcatctggaaccggagcccactgatctcaccttgggagtc
tccctccgtggcataacaaagatttatggatccaaagctgcagtagacaacctcagcctc
aacttctatgaagggaacatcacttccctgctgggacacaacggagccggcaaaactaca
accatatctattttgactgggttgttccccacatcatcaggtactatcttcgtgtatggc
aaagacatcaggactgaccaggaagttattaggaagaacatgggtgtgtgtatgcagcac
aatgtgctctttaactacctcaccacaaaggaacacctactgctctacgggtacatcaaa
gtccctcactggagtaaacaggagctctaccaagaagtgaagaggactttgaaggagact
ggactgtacagccatcgtcacaagctagctggctccctgtctggggggatgaagaggaag
ttatctatagctattgctctcctgggtggatcaagggtggtgatactagatgaaccaacc
acaggggtggatccatgctctcggagaagtatttgggaaattatctccaagaataaaaaa
ggcagaaccatcattctctcaacacatcacttggatgaagcagaagttctgagtgaccga
atcgccttcctagagcatggagggctcaaatgttgtggttcaccgttctacctcaaggaa
acatttggtgatggataccacctgacactcacaaaaaagaagaacatgatagaggagtgt
gacaccacagcagtgacctccttgatccagtcccacctcccggaggcttatctcaaggag
gatattggtggagagctcgtgtatgtgcttccccccttcaagtccacagtctcaggggcc
taccaggcgcttctcagagccctcgattccagcttgagtgatctcaaccttggttgctac
gggatttcaaacacaactgtggaagaggtgtttctcaatctgacaaaagagctagggaag
gaccagcaagaagttgctgaactgccccaacagctgcctggatccagtggtcaaactggt
agtgatgaaacatctatgagcacggataccttcacagaaagagacgatcagctcctgatt
agatcaaaaagcctgcagggtttgccgttgctgcttaagaagacatcagctttgttcatt
aagaggttccaccacacccggcgggatgtcagaggcttcattgctcaggtcatccttccg
gtcctctttgtgatggctgcgatgggacttgggacgctgagaactaaggagactgaatat
cccgagctgattctttccccctctctgtacggcacatccgaccaggcagacttctttggg
aattttaatgaaaccacagatgctttagtctcttcgatgcttgctttccctggaacggat
aatacatgcatgaatgaaagcaattcgcagtgtttaaaggaggacatgcttgggcagtgg
attatcagtggaaaccagagaactaagtattctgactgcaactgcacaaatggcatccag
acatgtcctcagacaaactacactccccctcacagaagaaccttctccacacggacactt
tataaccttacagggcacaatgtggagacctacattctggcaactaccaaagacttcctg
caaaaacggtatggtggctggagcttcgggctgcctttgacaacagatctccagtttgat
atcagaccggtgccccccaacagaacattgactaaggtgtggtataatcccgaaggttat
cacagccttccagcctatctcaacagcttgaacaacttcattctgcgagctaacttgcca
aaaaatgagacttccagatatggtattttcttatcagctcacccatatcctggaggacag
agtcaagaacaagtaatgctcaacagcttacttgacatcatagtttcaatgtctgttttg
gttggctactctatcacgacggcaagctttgtgctctatgtggtgaaagaacatcaaacc
aaagccaaacaactgcagcatatctcaggcattgggatgacaagctattgggtgactaac
ttcgtttatgatctggtactttttatggtccctattggactctcaataggagttatttca
tccttccagataccagctttctgcaacaacaataacttactggcagtatttcttctgctg
ttactgtttggatatgcaacgttttcatggatgtacctgctggctgggtttttcaaagaa
acaggaatggccttcatcgtttatgtctgcgtcaacttgttctttggcatcaataccatc
attactcactcggttgtatttctgctctcccaggaaaaggccacagatcagggcttgcat
gatcttgctgaaaacttaaggcatgtgttccttctgttcccacaattttgctttggctat
ggcttgattgaactgtcgcaggatcaggcgctgctgggcttcttaaaagcttatggagtg
gactaccctgacaaaacctttgagctggacaagaccacatccaagctgtttgccatgttt
atccagggcaccgtgttttttgccattcgtcttacagttcacgacaggatgattcagaga
gtctggaacaacatactagagttcctgtttgacagagtacatggcaaagcattgcttcta
tcacctgcgtctgaagaggatggggatgtccaggcagagaggaaccgggtggagtctggc
aaagctgacttcgatgtggtgcagctgcagaatctcacaaagatctaccaccttcctcac
aaacgcatcatggctgtgaaaaatattagtcttggagttcccacaacccagtgctttggc
ttgcttggtgtgaacggagctggaaagacgaccatctttaagatgttgacgggtgatatc
ggagcatccagcggaaggttacgcgtccaggatcattctgggtccttgaatgatatcagt
gaggcccactggtctctctttggctactgtcctcaagaagatgccttggatgacttgctg
actgtggaagagcacatgtattactatgctaggctccacggcatcccagagagagagatc
aaaggagttgtactccagcttctccatcggctgaatctgatggcctacaaagacagggtc
acctctatgtgcagttatggcaccaacagaaaattgtcgactgccctggctctcattggg
aatccatcaattctgctgctggatgaaccaagctctggaatggatccaaatgccaaacgc
cacctttggaaaatcatcagtgaagaagtgcagaacaaatgctcggtgatactcacatcc
cacagcatggaagaatgtgaagccctctgtaccaggctggctattatggtgaacgggagt
tttcagtgcattggctctttgcagcatatcaagagcaggtttggaagaggattcactgtg
aagatgcacttaaatagcaacacagttaacactgagatgctgacagagttcatgaagtca
cactttccaaatacatgcctgaaggatcggcatttcaacatggtggagtatcacgttcca
gtctctgcaggaggggtagcaaatatatttgatctcctggaagtcagcaaagcagccttc
aatatcaggcacttctcagtgagtcagacaacgttagaggaggttttcatcaactttgct
aaagaccaagcagatcctgatggcgcggatgcagatcctgatgtgacactggacagctct
gacacaagtagccaagatagcaccataagctccatctattga
DBGET
integrated database retrieval system
