Charadrius vociferus (killdeer): 104288816
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Entry
104288816 CDS
T08577
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein homolog
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104288816
Membrane trafficking [BR:
cvf04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
104288816
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Fuz_longin_3
Fuz_longin_2
Fuz_longin_1
Motif
Other DBs
NCBI-GeneID:
104288816
NCBI-ProteinID:
XP_009885990
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MPCPSSCPPGLLALMAPGLALMATFSLPSQAGDRRALPVEKPPGVKGRTLILLDVNTKSP
VRIISENFLSLQLDPSIIHDGWLDFLSLFSRLKGLMVRDQGGVEDSAGKGKPAEKDIVRS
DIALDKQKGCKIAQHPDIMLELQREKAAQMHLVLLKEQFSNTYSNLTLTARSLDKLYNFA
DCSGLHLIFALNALRRNPNNSWNSSNALSLLKYSASKKYNISWELGNEPNNYRTLIGRSV
NGSQLGKDYIQLRSLLQLIRTYSRANLYGPNIGRPRKNVIALLEGFMKVAGSTVDAVTWQ
HYYIDGRVAKVTDFLKTRLLDTLSDQIRKIQKVVNTYTPGKKIWLEGVGATSAGGMNNLS
DSYAAGFLWLNTLGLLASQGIDVVVRHSFLDHGHNHLVDQNFKPLPDYWLSLLYKRLIGP
KVLAIHVAGLQRKPRPGRVIRDKLRIYAHCTSYHNHNYVRGSITLYIINLHRSRKKIKLA
GTLRDKIVHQYLLQPYGKDGLHSKSVQLNGQPVYPKGPALEDSLNTLFAPLIISCTALLE
KLADTYTCFATEHGRHLHVLHMFGDCLYIAVNGDGTESEDDLRRALLVLCIEFLERQVVQ
YINTSPERGGDEVGHAFLLVHTKLLAFYSSRNASSIRPADLLILILLVQDMYPSQSAEEE
LGPQGPKRSESIPVSSPGSHGAAEKDSDDQDTDDLSVPEVYYTPEPSPGTHSTGEESWAE
GAEREADTSEVQMAEDLLQTLEPLVPEASNPRRIFLDANLREGYCPLLPHTMHCLPLWPG
ISLVLLTKGSTTQVAVTLYQLLDGFLVLERKLEEGREVGAPRSYPFLAELRQRMDKFVKK
LSGQDIQLQNAWVDFKNKIFSRNEPANSLELLQAVANVKRQLCSVYRQLFLASASHSLSQ
GLRDRAQKLMREKLLDWRDFLLVKSRRNITMVSYLEDFPGLVHFIYVDRTAGQMMAPSLS
VTEKSSSELGKGPLASFIKRKVWSLITLARRYLQKGYTTLMLQDGDYCCSYFLWFENELG
YKLEVMEVPVLSDDSAPIGMLAGDYYRKLLRYYSKNHQAEVVKCYELLTVHLGIIPSELV
VQQACDLARRLWEPSRIPLL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtcccagctcctgcccccccgggctcttagccctgatggcacctgggctggct
ctcatggccaccttctcgctgccctcccaggccggggacaggagagcgctgccggtggag
aaacctccaggtgtgaagggaagaactctcattctccttgatgtcaacaccaagagccct
gtcaggataatcagtgagaatttcctctccctgcagctggacccctccatcattcatgat
ggctggctcgatttcttaagcttgttcagccgcctgaagggattaatggtgcgtgaccag
ggaggtgtagaggacagtgctgggaaaggaaagcctgcagagaaagacattgttcgcagc
gacattgccctggataagcagaaaggctgtaagatcgcccagcatcctgacataatgttg
gagctacagagggaaaaggcagctcagatgcacttggttttgttaaaggagcagttttca
aacacatacagcaacctcacattaacagccaggtctctagacaaactctataactttgct
gactgctctggccttcacctgatctttgcactgaatgctttgcgccgaaatcccaacaac
tcctggaacagctccaatgctctcagcctgctgaagtacagtgccagcaagaagtacaac
atctcctgggagctgggcaacgagcccaataactatcggaccctgatcggccgctcggtg
aacggcagccagctggggaaggactacatccagctgagaagcctgctgcagcttatccgc
acttattccagagcaaacctctacgggccgaacattgggaggcccagaaagaacgtcatc
gctcttctggaagggttcatgaaagtggctggcagcacggtggatgctgttacctggcaa
cattactacattgatggccgagtggccaaagtgacggacttcctgaaaacgcgcctgtta
gacacgctctctgaccagatcaggaaaatccagaaagtagtcaacacttacacgccaggg
aagaagatctggctggaaggcgttggtgcaacctcggccggaggcatgaacaacctctcc
gattcctatgcagccgggttcctatggctgaacacgctgggcttgctggccagccagggc
atcgacgtggtggtgcggcactccttcctcgaccatggccacaaccacctggtggaccag
aacttcaaacctttgccggactactggctgtccctgctctacaagcgcctcattggtccc
aaggtcctggcaatccatgtggccggtctccagaggaaaccccggcccggcagagtcatt
cgtgacaagctccgcatttacgcccactgcaccagctaccacaaccacaactacgtccga
gggtccatcaccctttacatcatcaacctgcatcgctcccggaagaaaatcaagctggcg
gggacgctgcgggacaagatcgtccaccagtacctgctgcagccctatggcaaggacggg
ctccactccaagtcggttcagctcaacgggcagcccgtgtaccccaagggtccggcgctg
gaggacagcctcaacaccctcttcgccccactcatcatctcctgcaccgcgctgctggag
aagctcgccgacacctacacctgcttcgccaccgagcacgggcggcacctccacgtcctg
cacatgtttggggactgcctgtacatcgcggtgaacggcgatgggacggagagcgaggac
gacctgcgacgggccctcctcgtgctgtgcatcgagtttctggagcggcaggtggtgcag
tacatcaacaccagccctgagcgcggcggggacgaggtgggccatgccttcctcctggtg
cacaccaagctgctggccttctactccagccgcaacgccagctccatccgtcctgctgac
ctgctcatcctcatcctcctggtgcaggacatgtaccccagccagagcgccgaggaggag
cttggcccccagggacccaagagaagcgagagcatccccgtgagcagccctggctcccac
ggagctgcggagaaggactcggatgatcaggacacagacgatctctccgttcccgaggtt
tactacacgcctgagccctcaccaggcacgcacagcacgggtgaggagagctgggcggag
ggcgctgagagggaggcagacacgtcagaagtccagatggcagaggacttgctccagacc
ttggagcctctggtccctgaagcttcaaaccccagaaggatcttcctggatgccaacctg
cgggaaggctactgccccttgctgccgcacaccatgcactgcctcccgctctggccgggc
atctcccttgtcctcctgaccaagggctccacgacccaggtggctgtcaccttgtaccag
ctgctggatggtttcttggtgctggagaggaagctggaagaggggagagaggtgggagcc
ccgcgctcctacccattcctggccgagctgcggcagcgcatggacaagtttgtgaagaag
ctgagcgggcaggacatccagttgcagaacgcctgggtggacttcaagaacaagatattt
tcacggaacgagcctgcaaactccttggagctgctgcaggcagtggccaacgtgaagcgg
cagctctgctctgtgtaccgccagctcttcctggcctctgccagccacagcctgtcccag
gggctgcgggaccgtgcccagaagctgatgagggagaagctgctggactggcgggacttt
ctgctggtcaagagcaggcgcaatatcaccatggtgtcgtatctggaggactttcctggc
ctggtgcacttcatttatgtggaccgcactgctgggcagatgatggcaccatcgctcagt
gtgacagagaagtccagctcagagctgggcaagggccccctggcctccttcatcaagaga
aaggtctggtccctgatcacattggcccggcgatacctacagaaggggtacacaacgctc
atgctgcaggatggtgactactgctgctcctacttcctctggtttgagaacgagctgggc
tacaagctggaggtgatggaggttccggttctctctgatgactctgctcccatcgggatg
ctggcaggagactactacaggaaactgctgcgttactacagcaagaaccaccaggcagag
gtggtgaagtgctatgagctgctgaccgtgcacctgggcatcatcccctccgagctcgtg
gtccagcaggcctgcgatttggcacggcgtctctgggagccctcccgcatccccctgctc
tga
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