Charadrius vociferus (killdeer): 104288830
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Entry
104288830 CDS
T08577
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104288830 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104288830 (EXOSC1)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104288830 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104288830 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
104288830
NCBI-ProteinID:
XP_009886003
LinkDB
All DBs
Position
Unknown
AA seq
178 aa
AA seq
DB search
MATVYVCPSPEPAAGYRGRPCPELTLLSAAPQLPVVSVVRDAEAQLLPDVGAVVTCKVCS
INSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYKSFRPGDIVLAKVISLGD
AQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTKDFRKVARVQPQFLQT
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggccacggtgtacgtctgcccgtccccagagccggctgccgggtaccgaggcaggccc
tgccccgagctaaccctcctgtctgctgccccacagctgcctgtcgtgtcggtggtgaga
gacgctgaggcccagctcctgcctgatgtaggggccgtggtgacatgcaaggtttgcagc
attaactcccgttttgccaaggtgcacatcctgtatgttggctccacaccactgaagtcc
accttccgggggaccatacggagagaagatattcgagccacggagaaagataaggtagaa
gtgtacaagagtttccggcccggtgacatagtcctggccaaagttatctcgctgggggat
gcgcagtccaactacctgctgagcacggcagagaacgagctgggggtggtggtggcacgc
agcgaggcaggggtgcagatggtccccatcagctggtgcgagatgcagtgcccacggacg
cacaccaaggacttccgtaaggtggcccgcgtgcagccccagttcctgcagacctag
DBGET
integrated database retrieval system