KEGG   Charadrius vociferus (killdeer): 104288830
Entry
104288830         CDS       T08577                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104288830 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvf03019]
    104288830 (EXOSC1)
Messenger RNA biogenesis [BR:cvf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104288830 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104288830 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 RRP4_S1
Other DBs
NCBI-GeneID: 104288830
NCBI-ProteinID: XP_009886003
LinkDB
Position
Unknown
AA seq 178 aa
MATVYVCPSPEPAAGYRGRPCPELTLLSAAPQLPVVSVVRDAEAQLLPDVGAVVTCKVCS
INSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYKSFRPGDIVLAKVISLGD
AQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTKDFRKVARVQPQFLQT
NT seq 537 nt   +upstreamnt  +downstreamnt
atggccacggtgtacgtctgcccgtccccagagccggctgccgggtaccgaggcaggccc
tgccccgagctaaccctcctgtctgctgccccacagctgcctgtcgtgtcggtggtgaga
gacgctgaggcccagctcctgcctgatgtaggggccgtggtgacatgcaaggtttgcagc
attaactcccgttttgccaaggtgcacatcctgtatgttggctccacaccactgaagtcc
accttccgggggaccatacggagagaagatattcgagccacggagaaagataaggtagaa
gtgtacaagagtttccggcccggtgacatagtcctggccaaagttatctcgctgggggat
gcgcagtccaactacctgctgagcacggcagagaacgagctgggggtggtggtggcacgc
agcgaggcaggggtgcagatggtccccatcagctggtgcgagatgcagtgcccacggacg
cacaccaaggacttccgtaaggtggcccgcgtgcagccccagttcctgcagacctag

DBGET integrated database retrieval system