Charadrius vociferus (killdeer): 104288910
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Entry
104288910 CDS
T08577
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104288910 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104288910 (CNOT2)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104288910 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104288910 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
104288910
NCBI-ProteinID:
XP_009886085
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MFGASRKKFVEGVDGDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYGQQS
ALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMM
NHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQ
AFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVG
MVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSNDDNKSNLSTSGKTSSSTDGPKFPGD
KSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYG
EDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYY
FFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaaggaagaagtttgtagagggggttgatggtgactaccatgatgaa
aacatgtactacagccaatcatcgatgttcccacatcggtcagaaaaagatatgctggca
tcaccatcaacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagt
gcactaggccttccaatgaggggaatgagcaacaatacccctcagttaaatcgcagctta
tcacaaggcactcagttaccgagccacgtaacgccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccgagcagggggatattgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcccagcaggacaaacagcatgagcagt
tcagggttaggcagccccaacagaagctctccaagcataatatgtatgccaaagcagcaa
ccctctcgacaaccttttactgtgaacagtatgtctggatttgggatgaacagaaatcag
gcatttggaatgaataactccttatcaagtaacatttttaatggaacagatggaagtgaa
aatgtgacaggactggacctctcagattttccagcactagcagacagaaacagaagggaa
ggaagtggcaatccaactccattaataaaccctttagctggaagggcaccctatgttgga
atggtaacaaaaccagcaagtgagcagtcccaggacttttcaatacacaatgaagatttt
ccagcattaccaggctccagctacaaagacccaacatcaagtaatgatgacaataaatct
aatttgagtacatcaggcaaaacatcatccagcacagatgggcccaagtttcctggagat
aaaagttcaactacgcaaaacaacaaccagcagaaaaaagggatccaggtgttacctgat
ggtcgggttaccaacattcctcaagggatggtgacggaccagtttggaatgattggcttg
ttaacattcatcagggcagcagagacagatccaggaatggtacatcttgcattaggaagt
gatttaacaacactaggtctcaacctcaactctcctgaaaatctttatcccaaatttgca
tcaccgtgggcatcatcaccttgtcgacctcaagacatagacttccatgttccatctgaa
tacttaactaacattcacattagggataagctggctgcaataaaacttggccgatatgga
gaagatctcctgttttatctctattacatgaatggaggagatgtattacagctattagca
gcagtagagctatttaaccgggattggagataccacaaagaagaacgagtatggatcacc
agggcacccggcatggagccaacgatgaaaaccaatacatacgagaggggaacatattac
ttctttgactgtcttaactggaggaaagtagctaaggagttccatctggaatacgacaaa
ttagaagaaaggcctcatctgccatcaaccttcaactacaaccctgctcagcaagccttc
taa
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