Charadrius vociferus (killdeer): 104288970
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Entry
104288970 CDS
T08577
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04145
Phagosome
cvf04510
Focal adhesion
cvf04512
ECM-receptor interaction
cvf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104288970 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104288970 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104288970 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104288970 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104288970 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104288970 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
cvf00536
]
104288970 (COMP)
Membrane trafficking [BR:
cvf04131
]
Endocytosis
Phagocytosis
Opsonins
104288970 (COMP)
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104288970 (COMP)
Exosomal proteins of colorectal cancer cells
104288970 (COMP)
Exosomal proteins of bladder cancer cells
104288970 (COMP)
Glycosaminoglycan binding proteins [BR:
cvf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104288970 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
DUF7630
EGF
Motif
Other DBs
NCBI-GeneID:
104288970
NCBI-ProteinID:
XP_009886158
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MISALAFVFLLCLSCPFSSCQQRRTGGEVGPEMLEEMRETNRVLMEVRDLLKQQIKEITF
LKNTVMECDACGIHPEVTGPVITVTQFNRCLPNPCFPGVACTETGTGFRCGPCPPGYSGN
GSQCTDINECNANPCFPKVQCINTAPGFRCDPCPPGFTGQMVEGVGLAYARANKQVCTDI
NECETGAARNCVPNSICINTRGSYKCGACKPGFVGDQVSGCKSQTARRCPNGEISPCHEK
AQCIVERDGSLSCACLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCMTVPNSGQ
EDADRDGIGDACDDDADGDGILNAEDNCVYTRNADQRNVDKDNFGDACDNCRQVKNNDQR
DIDGDGRGDECDDDMDGDGIKNPMDNCKRVPNPDQKDADGDGVGDVCDSCPTVSNPDQKD
TDHDLVGDVCDTNQDSDGDGHQDTRDNCPTVPNSSQVDTDNDGLGDECDDDDDDDGIPDE
KPPGPDNCRLVPNPGQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQT
VVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDY
AGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWH
TGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVLDTT
MRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRVQQD
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgatttcggctctagcatttgtttttctcctctgcctctcttgtcctttttcatcatgt
cagcagagaagaacaggaggtgaagttgggccagaaatgctggaagagatgagagaaact
aaccgtgtgctaatggaagttcgagacttgttgaaacagcagattaaggagataacattc
ctgaagaatacagtcatggagtgtgatgcctgcggcatacaccccgaggtgacaggccct
gtcatcaccgtgacgcagtttaacagatgcctccccaacccctgcttccctggagtggcc
tgcactgagaccggcactggcttccgctgcggaccttgtcccccaggttattcaggcaat
gggtcccagtgcacagatatcaatgagtgcaatgcaaacccctgcttcccgaaggtccag
tgcattaacaccgcccctggcttccgctgtgatccctgccctcccggcttcactgggcag
atggtcgaaggggttggactagcttatgccagggccaacaaacaggtttgtactgacatc
aatgaatgcgagacaggtgctgccagaaattgtgtcccaaactctatctgcatcaataca
cggggatcctacaagtgcggggcttgtaagcctggcttcgttggggatcaagtcagtggc
tgcaagagccagaccgcgagacgctgccctaacggcgaaatcagtccatgccacgagaag
gcacagtgcatcgtggagcgcgacgggtccctctcctgcgcgtgcctcgtggggtgggca
gggaacggctacgtctgtgggaaggatacggacattgatggagtccctgatgagaagcaa
cgctgctctgacaaaaaatgccgcaaggataactgcatgactgtccccaactccggccag
gaggatgcagacagggatggaataggagacgcttgtgacgatgacgctgacggagatggg
atattaaatgctgaggacaactgcgtgtacacacgcaacgcagaccagcgcaacgtggac
aaggataacttcggtgatgcctgtgacaactgtcgccaagtgaagaacaacgatcaaagg
gacattgatggcgatgggaggggagatgagtgtgatgatgacatggatggagatggtatc
aaaaacccaatggacaactgtaagagagttcctaaccctgaccaaaaagatgccgatggt
gatggagtaggagatgtgtgtgacagctgcccaacagtcagtaacccagaccagaaagat
actgatcacgatctggtgggagatgtctgtgacaccaaccaggacagcgatggggatggc
caccaagatacgcgggataactgcccgacagtgcccaacagctcccaggtggacaccgac
aatgacgggctgggagatgaatgcgatgatgacgacgacgatgatgggattccagatgag
aaacctccaggccccgacaactgtcgccttgtccctaaccctggccaagaagactcagac
ggtgatggtgtgggaaacctttgtgaagatgactttgacagagacatggtgatcgacaga
attgacgtgtgcccagagaacgcagaagtgacactaacagacttcagggctttccagacg
gttgtactggaccctgagggcgatgcacagattgaccccaactggattgtcctcaaccag
ggcatggaaattgtccagaccatgaacagcgatcctggcctggctgtaggttacacggca
ttcaacggagtggacttcgagggcacattccacgtcaacactgccacagatgatgattac
gctggcttcatatttggctaccaggacagttccagcttttacgtggtcatgtggaagcag
atggaacagacgtactggcaggcaaaccccttccgggcagtagcagaacctggaattcaa
ctgaaggcagtgaagtctaaaacgggcccgggtgagtatctccgcaattctctctggcac
accggagacaccacagaccaggtcaaactgctgtggaaagaccctcgcaattccggctgg
aaggacaagacatcctaccgctggttcctgcagcatcggcctcaagtcggatacatcaga
gctcgcttctatgaaggccctgaagtagtagcagacactggggttgtccttgatacaacc
atgcgaggaggacgcctgggagtcttctgcttctcccaagagaacatcatttggtcaaac
ctgcgttatcgctgcaatgacaccattccagaagactacgaaacatttagagttcagcaa
gactaa
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