Charadrius vociferus (killdeer): 104288977
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Entry
104288977 CDS
T08577
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvf03009
]
104288977 (DDX49)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104288977 (DDX49)
Ribosome biogenesis [BR:
cvf03009
]
Eukaryotic type
90S particles
Helicases
104288977 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
WHD
Motif
Other DBs
NCBI-GeneID:
104288977
NCBI-ProteinID:
XP_009886165
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
RELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIATPGRLADHLRSSN
TFSLKKLKFLVLDEADRLLEQGSADFTADLEVILEAVPARRQTLLFSATLTDTLKELKSL
ASNRPFFWEAVSEVRTVDELDQRYLLVPEAIKDAYLVHLIQTFHDEHSDWAIIIFTKTCK
DCQVLNMMLKKYNFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARTPLSGVLEP
AFVINHNTPGLPKIYIHRVGRTARAGRKGIAITLVTQYDIHLVHAIEEEIKLKLQEYSVE
EQSVLDILTQVNVTRRQCEIELEGTDFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIR
KKNKQCREKIQQTLQKKKQLQLKRKLQRKMERRNKLHATEEK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
agggagctagcgtaccagatagccgagcagttccgcgtcctggggaagcccctcggcctg
aaggactgcgtggtggtgggcggcctggacatggtggcacaggcactggagctctcccgt
aaaccccacgttgtcatcgctacgcccggcaggctggcagatcacctccgcagttccaac
actttcagccttaaaaaactaaagttcttggttttggatgaagctgaccggttgttggag
cagggctctgctgacttcaccgcggacctggaggtgattctagaggctgttccggcacgc
agacaaacgttgctgttcagcgccacgctaaccgatacgctgaaagagctgaagagcctg
gcctcaaacagaccattcttctgggaggctgtgtccgaggtgcggacagtggatgaattg
gaccaacgctacttacttgtgcccgaagcaatcaaggatgcgtaccttgtccatttaatt
cagacctttcatgacgagcacagcgactgggctattattatctttaccaaaacctgcaag
gactgccaggtgttgaacatgatgcttaagaaatacaacttcccttctgtagctctgcat
tccatgatgaaacagcggcaacgatttgcagctttagcaaagttcaagtccagcatcttt
aagattctcattgccactgatgttgctgccagaacacctctgagcggtgttttggagccc
gcttttgtcatcaatcacaacactcccggcctgccgaaaatctacattcaccgggttggc
cggacagcccgtgcaggtcggaaaggaatagctattacactggtgacgcagtacgacatc
catctcgtacatgctattgaggaggaaatcaaactgaaactgcaggagtactctgtggag
gagcagtctgtgcttgacatcctcacccaagtgaacgtcaccaggaggcagtgtgaaata
gagctggagggaacggattttgatgagaagaaagaaataaataagcggaaacaaatgatc
cttgaagggaaggatccagatctggaagcaaaaaggaaggcagagctagccaagatcagg
aagaaaaacaagcaatgccgtgagaagatccagcagacgctgcagaagaaaaagcaactg
cagctgaagaggaaactgcagaggaagatggagcggcggaacaaactgcatgctacagaa
gagaaataa
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