Charadrius vociferus (killdeer): 104289017
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Entry
104289017 CDS
T08577
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104289017 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104289017 (PEX1)
Membrane trafficking [BR:
cvf04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
104289017 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
PEX-2N
nSTAND3
AAA_14
RuvB_N
RNA_helicase
AAA_5
DUF815
TIP49
AAA_22
AAA_28
AAA_18
AAA_33
NACHT
ABC_tran
Sigma54_activat
AAA_29
AAA_2
AAA_19
Sigma54_activ_2
AAA_25
AAA_7
ATPase
Bac_DnaA
APS_kinase
CoaE
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
104289017
NCBI-ProteinID:
XP_009886211
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MEIRHRGRQGENIAEINRQLAEKLGITDGQQVFLEPCSHVSSCQQVEVEPLSTDDWEILE
LHASSLEKHLLDQIRIVFPKAIFPVWVEQHTHIYIKIGTLMPATPYGRLEPCTELLICPK
IRELQENITSTPSTESDILLKSFVKNNTEREETIKDPFAKAPYLKPGVLEQSKADANVTL
GSNILPNIWNFIGSIFSHTSEQKQKTLCDKDEMSTFKDKLLNLIHMDSIFRVCQSQPPSV
QNASATHSFLKCNAIHVFPWNLEFIDLDPNPVVSYGKINQLLSPRQRHQEAKQNQPSEKQ
KHLTSTQDKNHSDSNSGQASSEGYVVQIVWNGFEDLKNVIEYGHSGEALHVGRVWIPDGL
RKKLRIEIHSTVRIKSVESVPKIPVSLTLQPKQNLHKDIHEDDVKSAFSSWLQDSTADDH
PWIMTSTDCIRLSVKEGIEEFVLSVVHPAHIEENKSENIFILSPSLLQKTNIQVLLHPLT
RKADGDSQPPMCDTDRNLPYHKLNDLGGVDKLGTSSFEHISHSLLGRPLSQKLAAIAVGL
RSGGVLLTGGKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLVNIRKTVEEAFLE
AAWRQPSILLMDDLDHVVGVPSTPEHENSPETVQSNRLAYVLKDLIKEIISMGSLIALIA
TSQSEHSLHPSLVSAQGTHVFQCFKCIRSPDQKQRCEMLCSIIKKKLNSDIKKFSDLDLQ
CIAKETEGFVARDFTMLVDRAIHACVSNQNVFQNGELNLSTMDFQKALKDFTPLALRNVN
LHKPKDVGWDRIGGLKDVKQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLL
AGVVARESGMNFISIKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRG
HDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQ
NSRYEILKALSHSLSLANDVDFQDLAAKTERFTGADLKALLYNAQLEAIHTNLGSGLTQD
FGSSSDSDFSLSSMVFLNHSSGSDDSAIDGEAVLEQSLISLDMSDLLPEDPRSNMYRLYF
GSSYESELGNGTPSELSSLCLSGPNSITHDFTSVTQRDAASSQPSVLRTASQEDSLENNQ
EQQIEHLRTEINAIKPNYRSKNGEDSTLNQSVLAKNTLIITQSHLMAALEGIRPSISQDD
WKNYTELYDNFQNPKKRKGQVVSAFRPGQKMTLA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaggcatcgaggtcgccagggtgaaaatattgcagagattaacagacagtta
gcagagaaacttggcattacagatggacaacaggtatttcttgaaccctgttcccacgtc
tcctcctgtcagcaggtagaagtggaaccactctcaacagatgattgggaaattctggaa
ctgcacgcttcctcgcttgaaaaacatcttcttgaccagattcgaatagtgtttccaaaa
gccatctttcctgtatgggttgaacagcacactcacatttacatcaaaatcggtacgctt
atgccagcaactccctatgggagattagaaccgtgcactgagcttctgatatgtcccaaa
atacgcgaacttcaggaaaatatcaccagcacgccttccacagaaagtgacatcttgctc
aaaagttttgtgaaaaataacacggagcgagaagaaacaataaaggatccttttgccaaa
gcaccttacttaaagccaggagttcttgaacagagtaaggctgatgcaaacgtgacgctt
ggctcaaatattctcccaaatatatggaatttcatagggagcattttctctcatacatct
gagcagaaacaaaagactttgtgtgataaagacgaaatgagcaccttcaaagacaagctg
ctgaacttaattcacatggattccatttttagagtatgtcagtcccagcctcccagcgtg
cagaatgcatccgccactcattcatttctgaaatgcaatgctattcatgtttttccgtgg
aatttagaatttattgatttggatccaaaccctgtagtatcttatgggaaaattaatcag
ctgctttccccaagacagcgtcatcaagaagcaaaacagaatcagccatctgaaaagcaa
aagcatttgactagtacgcaagacaaaaatcattctgattctaatagcggtcaagcatcc
agtgagggatatgtcgttcaaatcgtttggaacggatttgaagacctaaagaatgtcata
gagtatggccacagtggggaagccctacatgttggaagagtttggattccagatggtctg
agaaaaaaactacgtatcgaaatacattcaacagtccgaattaagtcagttgaatctgtt
cctaaaattcctgtatctcttacactgcaacccaaacagaacttacataaagatatacat
gaagacgatgttaaatctgctttcagttcttggctgcaggattccactgctgatgatcac
ccatggataatgacaagcacagactgtatacgtttgtctgttaaagaaggcattgaagag
tttgttctcagtgtagtgcatcctgcgcacattgaagaaaataagtctgagaatattttt
atactgagtcccagtttgctgcaaaagaccaatatacaagttcttttacatcctctaact
agaaaagctgatggtgacagccagccacctatgtgtgatacagacaggaaccttccttac
cacaaactaaacgatttaggaggagtggacaaattaggaacatcttcctttgaacacata
agccacagtcttctgggacgtcctttatctcaaaagctggctgctattgctgtgggactg
cgaagcggaggggtacttctcacaggaggaaagggaagtggaaagtcaacattagcaaag
gccatctgcaaagaagcgtttgatagactggatgctcatgtagaagtaattgattgtaaa
gctttaagaggaaaaagattagtaaacataaggaaaactgtggaagaagcttttttggag
gcagcgtggagacaaccatccattcttttgatggatgatcttgatcatgttgttggagta
ccttctacaccagagcatgagaacagccctgaaaccgttcaaagcaatagacttgcttat
gttttgaaagatctgataaaagaaattatttccatggggagtttgatcgcattaatcgcc
acaagtcagtctgaacattctctacatccttccctggtttcagctcaaggaactcacgta
tttcagtgcttcaaatgtatccgatctccagaccagaagcaaagatgtgaaatgctgtgt
tccataataaaaaagaaactgaattctgatataaagaagttctctgatcttgacctccaa
tgtattgcaaaggaaacggaaggttttgttgctagagattttactatgctggttgatcgt
gccattcatgcctgtgtttccaaccagaatgtatttcaaaatggggaattgaatctgtca
actatggattttcagaaagctctaaaagattttactccgttagctctgagaaatgtcaac
ctccataaacctaaggacgttggctgggacaggattggtggcttaaaagatgtgaagcaa
atactcatggataccatcatgttacctgcaaagtatccagaattatttgcaaacctgccc
atccgacagagatcaggagtcttgctgtatggagcacctggaacaggaaaaacactgtta
gcaggcgtagttgctcgagagagtggaatgaatttcatcagcatcaagggaccagagctg
ctcagcaaatatattggagcaagtgagcaagcagtccgagatatctttagcagagctcag
gcagctaagccttgtatcgttttttttgatgagtttgattctattgctcctcgtcgaggt
catgacaacacaggagttacagaccgagtggttaaccaactcttgactcagttagatggt
gtggaaggcttacaaggggtgtatgtgctagctgctacgagtcgcccagatttgattgac
cctgccttgttaaggcccggtcgactggataagtgcctgtactgtccgccgcctgatcag
aattcacgctatgaaatcttaaaagctctcagtcattccctgtccttggcaaacgatgtg
gactttcaggatttggcagcaaaaacagaacggttcacaggggctgacctaaaagcttta
ttgtataatgcccaattagaggcaatccatactaatttaggttcaggtttaacacaggat
tttggttctagttctgatagtgacttcagtctctcttccatggtttttctaaaccatagc
agtggctcagatgattcggcaatagatggagaagcagtgctagagcaatctctgatttct
ttagacatgtctgacttgcttcctgaagatccaaggtccaacatgtatcgtctttatttt
ggaagctcttatgaatcagagctgggaaatggaactccttcagaattgagctctttgtgt
ttgtctggaccaaactccataactcatgatttcaccagcgtgactcagagagacgcagca
tcatcacaaccttcagtgcttagaacagcttctcaggaagactccctggaaaataaccag
gagcagcaaatagagcacctgaggacagaaatcaatgctatcaaacccaattacagaagc
aagaatggagaggacagcacccttaatcagtcagtgcttgccaagaacactttaattatt
acccagtcccatctgatggctgcacttgagggcataagaccatccattagccaagatgac
tggaagaattatactgagctgtatgataattttcagaatcccaagaagaggaaaggacaa
gttgtctcagcattcagaccaggacaaaaaatgactctagcttag
DBGET
integrated database retrieval system
