Charadrius vociferus (killdeer): 104289083 Help Entry 104289083         CDS       T08577                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism cvf  Charadrius vociferus (killdeer) Pathway cvf04140   Autophagy - animal cvf04142   Lysosome biogenesis cvf04145   Phagocytosis cvf04148   Efferocytosis cvf05132   Salmonella infection Brite KEGG Orthology (KO) [BR:cvf00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     104289083 (VPS39)    04142 Lysosome biogenesis     104289083 (VPS39)    04140 Autophagy - animal     104289083 (VPS39)    04148 Efferocytosis     104289083 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     104289083 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cvf04131]     104289083 (VPS39) Membrane trafficking [BR:cvf04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     104289083 (VPS39) SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin VPS18_solenoid_2nd EcoR124_C Ribosomal_S3Ae Motif Other DBs NCBI-GeneID:  104289083 NCBI-ProteinID:  XP_009886282 LinkDB All DBs Position Unknown AA seq 878 aa AA seqDB search MREDYLRARGVPSGTGRAAHEEWLLVGTKQGHLLLYRIKKDIVPGEVMSSESVCCNRFEV TLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDL QQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRD YYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGICTQKCALNWT DIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVW RLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDE SMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKR SQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLEN NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQ HLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIPYL EHIIHVWEETGADFHNCLIQLYCEKVQGLMKEYLSSFPADKTPVPAGEEGGDLGDYRKKL LLFLEKSSWYEPGRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENYCH KHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKLDT TKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRRILHLQMKCIITE EKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT NT seq 2637 nt NT seq  +upstreamnt  +downstreamnt atgcgcgaggattacctcagggcgaggggagtcccctcagggacagggcgcgcggcccac gaggaatggctccttgttggtaccaaacaagggcatcttctgctttacaggatcaagaaa gacatagtgccaggagaggttatgtcatcagaaagtgtctgttgcaatagatttgaagtg acactagagaaatccaacaagaacttctcaaaaaagattcagcagattcatgttgtttct cagtttaaaattctggtcagtctattagaaaataatatttatgtccatgacctgttgaca tttcaacaaatcaccacggtttccaaggcaaaaggtgcatctctcttcacttgtgatctt cagcagtcagatacaggggaagaggtgctgagaatgtgtgtggcagtgcggaaaaagcta cagctttatttttggaaggacagagaattccatgaactacagggggacttcagtgtacct gatgtacccaagtctatggcctggtgtgaaaactccatctgtgtaggcttcaagagggac tattacctgatacgggtggatggaaaaggatccatcaaagaactgtttcccacagggaag cagctggaaccattggtagctcctgtagcagatgggaaagttgcagttggccaagatgat ctaaccgttgtgctcaacgaagaagggatctgtactcagaaatgtgccttgaattggaca gatattcctatagccatggaacaccagcctccctacatcattgctgttctgccaaggtat gtggagatccgcacttttgaaccccggctgctggtacagagtattgagctgcagagacca cgcttcatcacttctggaggcacaaatattatatatgtggcaagtaatcacttcgtgtgg cggcttattccagtctccatagccacacagatccagcagcttctgcaggacaagcagttt gagttggctttgcagttggcagaaatgaaagatgattcagatagtgagaagcgacaacaa attcaccacataaagaacctctttgccttcaacctcttctgccagaagcgctttgatgaa tccatgcaagtttttgccaagcttggtacagatcccactcacgtgatgggtctgtatcct gacctcctgcccacagattacaggaaacagctacagtatcccaaccccctgccagggctc tctggtgcagagctggagaaggcacatttagctctgatagactacctaactcaaaaaaga agtcagctggtgaagaagctaaatgattcagaccatcagtccagtacctcacccctcatg gaaggaacacccacaatcaaatccaaaaagaagctgctacaaatcattgataccaccctg ttaaagtgttacctgcatacaaatgtagcactggtggcaccactactacgtctggagaac aatcactgccatattgaggagagtgagcatgtactaaagaaggcacacaaatacagtgag ctgataatactgtatgagaagaagggtctgcatgagaaagcattacaggtactggtggat cagtcaaagaaagccaactcacctttgaagggtcatgagaggacagtgcaatatctgcag catttgggcacagagaacttgcacttggtattttcctactctgtctgggtgctaagagat tttcctgaagatggactgaagatatttacagaagacctccctgaagtagaagctttgcca cgagacaaagtgctcagtttcttgatagaaaattttaaaagcttgactattccttacctg gaacacatcattcatgtctgggaagaaactggtgcagactttcacaactgtctgatccag ctgtactgtgagaaagtgcagggcttaatgaaagagtatctcagttctttccctgcagat aaaactcctgtgcctgctggggaggaaggaggagacttgggggattaccggaaaaagctt ctactttttctggagaagtctagctggtatgaacctggtcgactaattagtgacttcccc tttgatggtctcctggaagaacgtgctctgctcttgggtcgtatggggaagcatgagcaa gctctgtttatttatgttcatattttgaaggacaccaacatggctgaaaactactgccat aaacattatgacagaaacaaagatggcaacaaagatgtctatctgtcactgctccggatg tatctctccccacctagtgtccactgcctgggaccaatcaagatggaagtgctggagcct caagccaatctgcaggctgctctgcaggttttggaactacatcacagcaaactggatacc accaaggcgataaacctactcccagcaaatacacagattagtgagattcgaatcttctta gagaaagtccttgaagaaaatgctcagaagaaaagatttaatcaagtactcaagaatctt ctccatgcagagtttctgaggcggatcttgcatctgcaaatgaagtgcattattacagag gagaaggtgtgcactgtatgtaaaaagaagataggtaacagtgcatttgctcgataccct aatgcaatagttgtgcattatttctgctccaaagaagtcaacacattggacacctga

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