Charadrius vociferus (killdeer): 104289122
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Entry
104289122 CDS
T08577
Symbol
SPTAN1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04210
Apoptosis
cvf04517
IgSF CAM signaling
cvf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104289122 (SPTAN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104289122 (SPTAN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104289122 (SPTAN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104289122 (SPTAN1)
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104289122 (SPTAN1)
Intermediate filaments
Intermediate filament-binding proteins
104289122 (SPTAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_7
EF-hand_1
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
EF-hand_FSTL1
Vip3A_N
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
104289122
NCBI-ProteinID:
XP_009886326
LinkDB
All DBs
Position
Unknown
AA seq
2477 aa
AA seq
DB search
MDPSGVKVLETAEDIQERRQQVLDRYHRFKELSSLRRQKLEDSYRFQFFQRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANSGAIIKLDETGNQMINEGHFASETI
RTRLQELHRLWELLLEKMREKGVKLLQAQKLVQYLRECEDVLDWINDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAGKLIQEQHPEEELIKSKQDEVNASWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKGQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKALCAEADRLQQSHPINASQIQVKREELIANWEQIRTLAAERHARLNDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DESGQALLAAGHYASDEVKEKLTILSDERSALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
MDDVATRRDALLSRRNALHERAMYRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYASDEVAARMNEVISLW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQDAGHFDADNIKKKQEALVARYEALKDPMVARKQKL
ADSLRLQQLFRDIEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGNAMVEEGHFAAEDVKIKLNELNQKWDSLKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSASRENLLEEQGSIALRQEQIDNQTLITKEVGSVSLRMKQVEELYHSLLELG
EKRKGMLEKSCKKFMLFREANELQQWINEKEAALTNEEVGADLEQVEVLQKKFDDFQKDL
KANESRLKDINKVANDLESEGLMADEVQAVQQQEVYGMMPRDETDSKTASPWKSARLMVH
TVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDN
YGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAEDLQEKCTELNQA
WNSLGKRADQRKEKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLER
HQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILEQERTDLEKAWVQRRMM
LDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEK
IAVLQSFADQLISADHYAKGVIANRRNEVLDRWLRLKAQMIEKRSKLGESQTLQQFSRDV
DEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDMGNS
LIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLS
EVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQV
KDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRD
LTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKEL
KQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAF
ETDFTVHKDRVNDVCANGEDLIKKNNHHEENITAKMKGLRGKVSDLEKAAAQRKAKLDEN
SAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIAN
ITALKDQLLAAKHIQSKAIEARHASLMKRWNQLLANSAARKKKLLEAQEHFRKVEDLFLT
FAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDR
QIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHAN
AFHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEA
LILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHF
DKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILDTVDPNRDGHVSLQEYMAFM
ISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCISHMKPYMDGKGRE
LPSAYDYIEFTRSLFVN
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagtggtgtaaaagtgttggaaacagcagaagatatccaagaaaggcgtcaa
caagttttggaccgttaccacaggttcaaggaactatcttctctaaggcgccaaaaactt
gaagattcctatcgattccagtttttccagcgtgatgcagatgagcttgaaaaatggatc
caagagaaactgcagatagcatctgatgaaaattacaaagacccaagcaatttacagggg
aagctgcagaagcaccaagcctttgaagctgaggtgcaggccaattcaggggctatcatt
aaactggatgagactggaaatcagatgattaatgaaggccattttgcatctgaaaccata
agaactcggctgcaggaactgcaccgactatgggaattactgttggaaaagatgagggag
aagggagtcaaattgttgcaagctcagaagctggtgcaatacttacgggaatgtgaagat
gtcttggactggatcaatgacaaggaagcaatagtgacctcagaagagcttgggcaggac
ttagagcacgttgaggttttgcaaaagaagtttgaagagttccagacagaccttgcagct
catgaggaaagagtaaatgaagtgaaccagtttgctggcaaacttatccaggaacaacac
cctgaagaggaactgatcaagtccaaacaggatgaagtaaatgcaagctggcagcgtctt
aaggggcttgctcttcagaggcaaggaaagctctttggagcagctgaagttcagcgcttc
aacagggatgtggatgaaacaatcagctggattaaggagaaagggcagttgatggcctca
gacgattttggcagagacttagccagtgtgcaggctttattgcgtaagcatgaaggcctg
gaaagagatcttgcagctctggaagacaaggtgaaggccctttgtgcagaagctgaccgt
ttgcagcagtctcacccaataaatgcttctcaaattcaagtgaaacgggaggagctgatt
gccaactgggaacagatccgaactctggcagcagagagacacgctcgccttaatgactcc
tacaggttgcagcgctttcttgcggacttccgagacctcaccagctgggtgactgagatg
aaggctctgataaatgctgatgaacttgccaatgatgtggctggagcagaagcccttcta
gacagacatcaggaacataagggagaaattgatgcccatgaagatagcttcaaatctgct
gatgagtctggccaggctttgcttgctgctgggcactatgcttctgatgaggttaaagaa
aagctgaccatcctctcagatgaaagatctgccttgctagaactatgggagcttcgcaga
cagcagtatgaacagtgcatggacctgcagcttttctacagagatactgaacaagttgac
aactggatgagcaaacaagaagcatttctgctgaatgaagaccttggtgattctctggat
agcgtggaggctcttttaaagaagcatgaagactttgagaaatccctaagtgcccaagag
gagaaaatcacagcattggatgagtttgctaccaaattgattcagaataaccattatgcc
atggatgatgttgctacacgcagagatgctctgctgagccgccgaaatgcccttcatgaa
agagctatgtaccgccgtgctcaactggcagattccttccatctgcagcagtttttccga
gactctgatgagctaaagagttgggttaatgaaaaaatgaaaactgcaacagatgaggca
tacaaggatccatcaaacttgcaaggtaaagttcagaagcatcaggcttttgaagccgag
ctttctgctaatcagagtcgtattgatgcactggagaaggctggccagaagttgattgat
gtcaatcactatgcgtctgatgaagtggcagctcgcatgaacgaagttatcagcttgtgg
aagaaacttctggaggccactgagctcaaaggtataaaactgcgtgaagccaatcaacag
cagcagtttaatcgcaatgtggaagacattgagctgtggctgtatgaagtagaaggtcac
ttggcttctgatgattatggaaaagaccttactagtgttcagaatcttcagaagaaacat
gctctgctagaggcagatgtcgctgcccatcaggatcgtatagatggcattaccatccag
gcacgccagttccaagatgctgggcactttgatgctgacaatatcaagaagaaacaagaa
gctttagtagctcgttacgaagctctaaaagatcctatggtcgctcgcaagcagaagctt
gcagattctcttcgcctgcagcagcttttccgtgacattgaggatgaagagacctggatt
agggaaaaagaacctatagcagcttcaacaaaccgaggcaaggacttaattggcgtccaa
aatctgctaaagaagcaccaggctttgcaggccgaaattgcaggccatgagccccgcatt
aaagcagtcacacagaaaggaaatgctatggtggaagaggggcactttgcggctgaggat
gtgaaaatcaaattgaatgagctaaaccaaaaatgggactctctgaaagctaaagcatct
cagcgtcgacaagacttagaggattccctgcaagctcagcagtacttcgctgatgctaat
gaagcagaatcctggatgagggaaaaggagcccattgtaggcagtacagactatggaaaa
gatgaagactctgctgaggctcttctgaagaaacatgaggctttgatgtctgatctttcc
gcttacggcagcagcatacaggcgttaagggaacaggcccagtcatgcaggcaacaagtt
gctcccacagatgatgaaactggcaaagagctcgttctggcactctatgattaccaagag
aagagtccccgggaggtgactatgaaaaagggggatatcctcaccttactcaacagcacc
aacaaggactggtggaaggttgaagttaatgaccgtcagggctttgtaccagctgcctat
gtgaaaaaactagatcctgcccagtctgcatcccgagagaatctcctggaagagcaaggc
agcatagcactgcgacaggagcaaattgacaaccagactctcataactaaggaagtcggc
agtgtatctctgcgtatgaaacaggtcgaagaactgtatcactctcttcttgagctggga
gaaaaacgtaaaggcatgctagaaaaaagctgcaaaaaatttatgcttttccgtgaggct
aatgagcttcaacagtggattaatgagaaggaagctgcactcacaaatgaggaagtgggt
gctgatctggagcaggttgaggtgctacagaagaaatttgacgattttcagaaggattta
aaagctaatgagtcacgtctgaaggacataaacaaggttgcgaatgacctggagtcagaa
gggttgatggcagatgaagtgcaagcagtacagcaacaggaagtctatggtatgatgccc
agggatgaaactgattctaagacagcctctccttggaagtctgcacgtttgatggtacac
acagtggcaacctttaactcaatcaaggaactgaatgaacgctggaggtctctgcagcag
ttagcagaggagcgaagccagctgttgggcagtgcccatgaagtccagagattccacaga
gatgctgatgaaacaaaagaatggatagaggagaagaatcaagcattaaatacagacaac
tatggacatgacttggccagtgtgcaggctctgcagcgcaaacatgaaggctttgagaga
gacttggcagctcttggagacaaggtgaattctcttggtgaaactgcccagcgtctgatc
cagtcacatcccgaatctgctgaagatctccaggaaaaatgtaccgagttgaatcaggct
tggaatagtctgggaaaacgtgctgaccagcgcaaggagaagcttggagattctcatgac
ctgcagcgtttcctcagcgacttcagggaccttatgtcttggatcaatggaatccggggc
ctagtctcttcagatgaacttgcaaaggatgtgaccggagctgaagctttattggaaagg
caccaggagcaccgcactgaaatagatgcaagggctggcaccttccaggcatttgaacag
tttggacaacaacttctggctcatggacactatgccagcccagagatcaaggagaaactg
gatattctagaacaagaacgaacagatctagagaaggcctgggtccagcgcagaatgatg
ctagaccagtgcctagaactacagctgtttcaccgggactgcgaacaagctgaaaactgg
atggctgcccgagaggctttcctaaatacagaagacaaaggagattccttagacagtgtg
gaggcactcatcaagaaacatgaagattttgataaggcaatcaatgtccaggaagagaaa
attgctgtcttacagtcttttgctgaccagctgatctctgctgatcattacgcaaaagga
gtcattgctaacagacgcaatgaggttctggacaggtggcttcgtctgaaagctcaaatg
attgagaagagatcgaagctaggagagtctcagacgctccagcagttcagtcgtgacgtg
gatgaaatagaagcctggatcagtgaaaaactccaaactgcaagtgatgagtcatataag
gatcccacaaacatccagctttccaaactgctgagcaaacaccagaaacaccaagccttt
gaagctgagctccatgccaatgcagatcggatccgtggagtcatcgatatggggaactca
ctgattgaaagaggagcgtgtgctggcagcgaggatgctgtgaaggcacgcctagctgcc
ctggctgaccaatggcaattcctggtacagaaatcagcagagaagagtcagaaactgaaa
gaagctaataagcaacagaatttcaatactggaattaaggactttgatttctggctttca
gaggtggaggctttgttggcatctgaagactatgggaaggacttggcatcagttaacaac
cttctgaagaaacaccaattactggaagctgatatatctgctcatgaggatcgtctgaag
gacctgaacagtcaggctgacagtttgatgaccagcagtgctttcgatacatcccaagta
aaggataaacgtgagaccattaatgggcgcttccagaggattaagagtatggcagctgcc
cgccgtgcaaagctcaacgagtcccaccgtttgcatcagtttttccgtgatatggatgat
gaggagtcctggatcaaagagaagaaactgttggtgagctcagaggactatggcagagac
ctaaccggggtgcagaacctcaggaaaaagcacaagcgcttagaagcagaattagctgcc
catgaacctgctatccagggtgttctagacactggtaagaagctttcagatgataacacg
attggcaaggaggagatacagcagagactggctcagtttgtggatcactggaaagagtta
aaacagttggcagctgctaggggtcagcgtctagaggagtctctggagtaccagcagttt
gtagcaaacgttgaggaagaagaagcctggatcaatgagaaaatgacgttggtagccagc
gaggattatggggacacccttgctgctatccagggcttgctgaaaaagcacgaagcattt
gagactgattttactgtccacaaagacagagtgaacgatgtttgtgctaacggagaggat
ctcattaaaaagaacaatcaccacgaggagaacattaccgctaagatgaagggcctcaga
ggcaaggtgtcagatctggagaaagcagcagctcagaggaaagccaaattggatgagaac
tctgccttcctccagttcaactggaaagcagatgtagtggagtcatggattggtgagaaa
gaaaacagtctgaagacagatgattatggacgcgacctctcttctgtgcaaacactcctc
actaaacaggaaacatttgacgctggacttcaggctttccagcaggagggaattgcaaac
atcactgccctgaaagaccagctactagcagccaaacacatccagtcaaaggccatcgag
gctcggcatgcttccttgatgaaacgctggaatcagctacttgctaactctgctgccagg
aaaaagaaactcctggaggctcaggagcatttcagaaaggttgaggatctgttcctgact
tttgctaagaaggcgtctgccttcaacagttggtttgagaatgctgaagaggacctgaca
gatcctgtgcgctgtaactcgctggaagaaatcaaagcactgcgagaagctcatgatgct
ttccgttcttcacttagttctgcccaagctgacttcaaccagctggcagagcttgatcgc
cagatcaagagcttccgtgtagcgtccaacccatatacttggtttactatggaggctctt
gaagaaacctggaggaatctgcagaaaattattaaggaacgtgaattggagctgcagaag
gaacagcgaaggcaggaagaaaatgacaaactgcgccaggaatttgctcagcacgctaac
gctttccatcagtggattcaggagaccaggacttacctgctagatgggtcttgtatggtg
gaggaatcgggaacgctggaatcgcagttggaagctactaaacgcaagcaccaggagatc
cgagctatgaggagccagctgaagaagattgaggaccttggggcagccatggaagaggca
cttattttggacaacaaatacacagaacacagcaccgtggggctggcgcagcagtgggac
cagcttgaccagctggggatgagaatgcagcacaacctggagcagcagattcaggctcga
aacacaactggagtcactgaggaggccctgaaggagttcagcatgatgttcaagcacttc
gacaaggacaaatctggacgacttaatcaccaggagtttaagtcttgcttgcgctctctt
ggctacgacctgcctatggttgaggaaggagagccagacccagagtttgagtctattctt
gacactgtagatcccaacagggatggacacgtctcgctgcaggagtacatggcgtttatg
atcagcagggaaacagagaacgtgaaatccagtgaggagattgagagcgctttccgcgcc
ctcagctcagaggggaagccctacgtgaccaaggaggagctctaccaaaacctgacccgg
gaacaagccgattactgcatttctcacatgaagccctacatggacggcaagggcagagaa
cttccttctgcctacgactacatagaatttacacgttcactctttgtgaattga
DBGET
integrated database retrieval system
