Charadrius vociferus (killdeer): 104289222
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Entry
104289222 CDS
T08577
Symbol
PUS1
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104289222 (PUS1)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104289222 (PUS1)
Transfer RNA biogenesis [BR:
cvf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104289222 (PUS1)
Prokaryotic type
104289222 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
104289222
NCBI-ProteinID:
XP_009886440
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MSPQKEEQAAQGVLSIVCGPLCQPEGTVPGVEGAGPRPGAVAACPLAGSSGAENAAPEPP
TCRLPPDGPSPALATGPGEQGGPGREEGRERSSQELPLRHFEGPPSCLLFRPLQVLAMAE
DLRAAVTSPTKRLNSGSEAVERVEENGHQNKRLKRDADEEDVEDQNKKSPKRKIVLLMAY
SGKGYHGMQRNVGSSQFKTIEDDLVSALVQSGCIPENHGEDMKKMSFQRCARTDKGVSAA
GQIVSLKVRLIDDILEKINNHLPSHIRILGLKRVTGGFNSKNKCDARTYSYMLPTFAFAH
KDHDVQEEVYRLDKETLEKVNKLLACYKGTHNFHNFTSQKGPKDPSAKRYIMEMYCGEPF
VRENIEFAVIKVKGQSFMMHQIRKMIGLVIAIVKGYAAESIIERSWGEEKVDVPKAPGLG
LVLERVHFEKYNRRFGNDGLHEPLEWTEEEEKIAVFKEQHIYPTIINTEREEKSMANWLN
TLSIHDFNSSAVGMQANNKNSKNSSDLEGSDGCDDDSD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccacagaaagaggaacaggcggctcagggagtgctgagcatcgtgtgtggcccg
ctctgccagccggaggggacagtccccggggtggaaggagcaggtccccggccaggggct
gtagctgcatgtcccctggcagggagctctggggcggagaacgcggccccagagcccccc
acctgcaggctgccgccagatggtcccagccctgctctggccacgggccctggggagcag
ggtggccctgggagggaagaagggagggagagatccagccaggaactgcccctgagacac
tttgaaggacccccatcctgtctgctgttccgtcccttgcaggttctcgcaatggctgag
gatttgagagcggcggtcaccagcccgaccaagagactgaacagcggcagcgaggcggtt
gaaagggtagaagaaaatggacatcagaataaaaggttgaagagggatgcggatgaggaa
gatgtggaggatcagaataaaaagtcacccaaaaggaagatcgtgttgttgatggcatat
tcggggaaaggctaccatgggatgcaaagaaacgtgggatcttcacagttcaagactatt
gaagatgacttagtatctgcccttgttcagtcaggctgcatcccagaaaaccacggggaa
gatatgaagaaaatgtcttttcagcggtgtgctcgaacagataagggtgtgtctgcagct
ggacagattgtgtcgctaaaggtcaggctaatagatgacatcttagaaaagatcaataac
catcttccttctcacatcagaattctgggtctgaagagagttactgggggattcaactcc
aagaacaaatgtgatgccagaacctactcttacatgctgccaacatttgcctttgcccat
aaagaccacgatgtgcaagaagaggtttatcgactggacaaagagacccttgaaaaagtg
aataaactgcttgcgtgctataaaggaacacacaacttccacaacttcacatctcagaag
ggacctaaggaccccagtgccaagcggtacatcatggagatgtactgtggagaaccgttt
gtgagggaaaacatagaatttgcagtgatcaaagtgaaaggtcagagtttcatgatgcac
caaataaggaagatgattgggctggtgatagctattgtgaaaggttatgctgccgagtct
atcatagagcgcagctggggagaggagaaagtagatgtccccaaagccccaggacttggg
ctggtcttggaaagagtacactttgaaaaatacaacagacgttttggaaatgacgggctg
catgagccactggagtggacagaggaggaggagaagattgctgttttcaaagagcagcat
atctatcctaccattatcaacacagagagggaggagaaatccatggcaaactggctgaac
accctctccattcatgacttcaactcttctgctgtggggatgcaagctaacaacaaaaat
tcaaagaacagcagcgatcttgaaggcagtgatggttgtgatgatgattctgactga
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