Charadrius vociferus (killdeer): 104289474
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Entry
104289474 CDS
T08577
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04512
ECM-receptor interaction
cvf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104289474 (FREM2)
04518 Integrin signaling
104289474 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cvf04091
]
104289474 (FREM2)
Lectins [BR:
cvf04091
]
C-Type lectins
Lecticans
104289474 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Calx-beta
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
104289474
NCBI-ProteinID:
XP_009886728
LinkDB
All DBs
Position
Unknown
AA seq
2249 aa
AA seq
DB search
MEGDFELGFGVNIGWAMPVTFTAAGGGALLKREYFQVLVRIRAGTENVAPKPSFLAMLMM
EVDQFVLTALTPDMLAAEDAESPADLLLFNITSPFGPGQGHMVSTDDRSLPVSSFSQRDV
RELRIAYQPPTEDSDRERLFELELEVLDPEGAASEPFAFVIVVKPMNTLAPVVTRNTGLV
LYEGQSRPLSGPGPSPNLVISDEDDLEQVRVSVVAGLRHGHLTLLEDTPVPAAPRKHFTV
AELAAGRVIYQHDGSESPLSDNLVLRLEDGGSRHRVEFLFPITLVPTDDQPPLLNANTGL
AMAEGETVPITTRALSATDIDSQDAILLFTVESGPTAGQLLLRQAQPPPGWEEEEEEEGF
SWRRVPGLAGSSLIYEKPVREWLQQDIVEGRLYYHHVGPHSPGPGIVLDQFVFRVQDDND
PPNRSGPQTFVIRVHPVDRLAPELHSSSSLHLVVAEQQVTPLRRKHLCYTDQDSGDRELR
YTITQPPTDTNHPPEVYGARLGSLVLTEDHSVEVTHFTQAQINHHKIAYRPPQEELGVAP
HLIQFQYQVQDAAGNAAEGTFTIYLQPVDNQPPEITNTGFTLPEGGSHVLSPTELDASDT
DTELARLRFILTQAPRYGQLQLSGYSLIPGAVFGLEDIRQGRVVYVHSGAETNSDTCRLD
VSDGVHFVPITLKMNVHPVDDEVPMLRLPPGTLGSYLDVLENGAAEITANVIQGTDEDTD
DLMLTFIVEDPPQHGNILVQGVPAERFSQRDVLDGAVVYAHTGGEIGLLPKEDTFNLTLS
DMSEEWSVRGNVVQGVSVLVTILPVDSQAPKIFVGEQFMVMESDKRVITPAHLRAEDVDT
PNDDILCTIVAQPTSGYVENISPAPGSEKSRAGVAISAFTLKDLRQGHIFYVQSIHKGVE
PVEDRFAFRCSDGINFSQRHFFPIVIMPINDEEPEIFIREFVVMEGMSLVIDTPILNAAD
ADIPADELVFTITRLPRHGHIVNQLVNGTVLVESFTLDQITESSNILYEHDDSETKEDSF
EVKLTDGKHTIRKMVLIMVIPVDDETPRMAINDGLEIEIGETRTIHNRILKATDLDSEDK
TLTYIIRYGPGQGLLQRIKPSGGVENITLGMNFTQDEVDRNLIQYMHFGQEGVRDLIKFD
VTDGINPLIDRYFYVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDLNSPDENLV
FTITRAPVRGHLECTDQPGVPISTFTQLLLAGNKIYYIHTSEDEVKMDSFEFEVTDGYNP
VFRTFRISISDVDNKKPVVTIHNLVVSENEYKLITPFELTAEDRDTPDALLKFILTQIPV
HGQIMFNNSKPVTTFTKQDLNENLISYKHDGTESVEDSFSFTVTDGTHTDFYVFPNTVFE
TRRPQTMKIRIMAVDNSVPQIVINKGAQTLRILATGHIGFLITSKVLKVEDRDSLHATLK
IRITEGPRHGFLIHLGKGNHSISQFTQADIDDMKICYVLRGGDNATSDIFHFMVEDGGGN
KLKNQHFRLNWAWISLEKEYYLVNEDSKYLDVVLKRRGYLGETSFISISTKDGTAKKDKD
FRGKAQKQVQFNPGQTLATWRVRILSDGEHEQSESFQIVLSEPVMAVLEFPDASTVEIID
PGDESTVFIPQSTYTIEEDVGELFIPVRRSGDVSQELMVICYTQQGTASGTAPTSVLSYS
DYISRPEDHNSILRFDKDEREKMCRIVIIDDSLYEEAETFDVLLSMPMGGRIGAEFPSTR
ITIIPDKDDEPAFYFGNDEYYVDESAGYVEVRVWRTGTDLSKAASVTVRSRKSEPITAEA
GVDYVGISRNLDFSPGVNMQTFRVVILDDLGQPVLEGTEKFELVLRMPMNAALGEPSKAT
IFINDSVSDLPKMQFKESVYVGNENEGQISAMIYRSGDIRYTSTVRCYTRQGSAQVMMDF
EERPNTDSSIITFLPGETEKPCTLVLMDDTFHEEEEELRLVLGTPRSDSSFGASIGEQNE
TLIKIRDDADKAIIKFGETKFSVSEPKDIRQVAVVKIPVLRLGDTSKVSVVRVHTKDGSA
TSGEDYHPISEEIEFKEGETQHFVEIEVLFDGVREMREAFTVHLKPDENMVAEIQTAKAI
VYIEEMNSMADVTFPSVPQVASLLIYDDTSKAKDRSSPIAGYPVICITACNPKYEDFEKT
GSICASENINNTLTRYRWLVSAPTGPDGVTSPMKEVDFDTFFTSSKMITLDSIYFQAGSR
VQCAARAVNSDGSEGLELMSPIVTISTSE
NT seq
6748 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgatttcgaattgggttttggagtgaatattggctgggccatgccggtcaca
tttactgcggcaggcggtggggcgctgctgaagcgtgagtacttccaggtgctggtgcgg
atccgggccgggactgagaacgtggcccccaaacccagcttcttggccatgctcatgatg
gaggttgaccagtttgtcctcaccgcgctcacgcctgacatgcttgcagctgaggatgca
gagtcaccagcagatctgctgctcttcaacatcacctcgccctttggccctggccagggg
cacatggtcagcacagatgaccggagcttgcctgtctcctccttcagccagcgggatgtg
agggagctgcgcatcgcctaccagccacccacggaggactcagatcgggagcggctcttt
gagctcgagctggaagtgttggaccccgagggtgctgcctcagagcccttcgccttcgtg
attgtggtgaagccaatgaacaccctggcacctgtggtgacccgcaacactggcctcgtg
ctctatgaggggcagtcacggcctctgtcaggccccggtccaagccccaacctggtgatc
agtgatgaggatgaccttgagcaggtgcgggtcagtgtggtggcagggctgaggcatggc
caccttactttgctggaggacaccccagtacctgctgcccctcgtaagcacttcacagtg
gctgagctggcagcaggccgggtcatctaccagcatgacggcagtgagtctccacttagt
gacaacctggtgctgcggctggaagatggtggctctcgccaccgtgttgagttccttttc
cccattaccctggtgcccactgatgaccagccacccctactcaatgctaacacagggctg
gccatggctgagggtgaaacagtgcccatcaccacccgtgctcttagtgccactgacatt
gactcacaggatgccatcctgcttttcacagtggagtctggccccactgctgggcagctc
ctcctccgtcaagcacagccacctcctggctgggaagaggaggaagaagaggaaggcttc
tcttggaggagggtgccaggtttagcagggagctccctaatctatgaaaagccagtgaga
gagtggctgcagcaggacattgtggaagggcgtctctattaccaccacgttgggcctcac
agccctggacctggtattgtgttggaccagttcgtcttcagagtccaggatgacaatgac
ccacccaaccgctccggaccacagacttttgtcatccgggtgcatcccgtagacagatta
gccccagagctgcatagcagcagcagcctgcacttagtagttgcagaacagcaggtgacc
ccactgcgaaggaagcacttgtgttacacagatcaggattcaggggaccgtgaactccgc
tatacaataacccagccccccactgacacgaaccaccctccagaagtatatggagcccgc
cttggatccctcgtgctgactgaggatcactctgtggaagttacccacttcacccaagcc
cagatcaatcatcacaagatagcgtaccgtcccccacaggaagaactgggggtggctcct
catttgattcagtttcagtatcaagtgcaagatgcagctggcaatgcagctgaggggact
ttcaccatctacctgcagcctgtggacaaccagcctcctgaaatcactaatactggcttc
actttgcctgagggaggcagccatgtccttagtccaactgagctggatgccagtgacaca
gacactgagcttgcccgtctcagattcatcctgacccaggctcctcggtatggccagttg
cagctttctgggtacagtttgattccaggagctgtcttcggcctggaggatatcagacaa
gggcgggtggtgtatgtgcacagtggagctgaaaccaacagtgatacctgcaggcttgat
gtgagtgatggggttcattttgtgcccatcacactgaaaatgaatgtgcacccagttgat
gatgaggttcctatgctacggttacccccaggcactcttggttcctacctggatgtgctg
gagaatggggctgctgaaatcactgctaatgtcattcagggcacagatgaggatacagat
gacttaatgttgaccttcattgtagaggatcctcctcagcatgggaacatcctggtccaa
ggggtgcctgcagagagattttcccagagagatgtgcttgatggtgctgtggtatatgct
cacactggtggggaaataggccttctgcccaaagaagataccttcaaccttaccttgtct
gacatgtctgaggaatggagcgtcaggggcaacgttgttcaaggagtatcagtcttggtg
accattcttcctgttgacagtcaagccccaaagatttttgtgggggagcagttcatggta
atggaaagtgacaaacgggtcattactcctgctcacctcagggctgaagatgtggatact
cctaatgatgatatactctgcaccattgttgctcagcccacatctggctatgtagagaac
atttctccagccccaggatctgaaaaatccagagcaggtgtagctataagtgcttttacc
ttgaaagacctccgtcaagggcatattttttatgttcaaagtatacataagggtgtggag
cctgttgaagacagatttgctttccgctgttctgatggtattaacttttcccaaaggcac
tttttccctattgtcattatgccgatcaatgatgaagagcctgaaatctttatacgagag
tttgttgtgatggaaggcatgagcctggttattgatacccctatcctcaacgcagctgat
gcagacatccctgctgatgagttagtgttcacaatcaccagacttcccaggcatggccac
attgtgaaccagctggtcaatggaactgtcctagtggagagcttcaccttggatcagata
acagagagctccaacatactctatgaacatgatgactctgagacaaaggaggacagtttt
gaggtgaaactcacagatggtaaacataccattaggaaaatggtactcatcatggttatt
cctgtagatgatgagacacccagaatggccatcaatgatggtttggagattgaaataggg
gaaactagaactattcataacagaatattgaaggctactgacctggattctgaagacaaa
accttgacatacattataagatacgggccaggacaaggcctcttgcagagaataaagcct
tcaggtggagttgagaatattaccctggggatgaacttcacccaagatgaagtggataga
aacttaattcaatatatgcattttggccaagaaggagttcgtgatcttatcaagtttgat
gtgacagatggaataaatcctctcattgaccgctacttttatgtgacaataggtagcatt
gatattgtcttcccagatgtaatcagcaaaggagtttctctgaaggaaggagggaaggta
acccttactactgatttgcttagcaccagtgacctgaatagtccagatgagaacttagtt
ttcactattaccagagcacctgttcgtggtcatcttgaatgcacagatcagcctggggta
cccatctccacttttactcaacttctgttagcaggcaataaaatctactacattcacact
tcagaagatgaggtgaaaatggacagctttgaatttgaggtgactgatggctataaccct
gtatttcgtactttcagaatttctatcagtgatgtggacaataagaaacctgtcgtcaca
atccacaacctggtggtgagtgaaaatgaatacaaactgataaccccatttgaactcact
gcagaagacagagatacacccgacgcattgctaaaatttatcctcactcaaataccagtt
catggccagatcatgttcaacaactccaaaccagtcaccaccttcactaaacaagatcta
aatgaaaatctcattagctacaaacacgatggcacagaatcagttgaggatagcttctct
ttcactgttacggatggcactcatacagatttctatgtcttccccaacactgtgtttgaa
acaaggagacctcagacaatgaagatacgaataatggctgtggacaacagtgtacctcaa
attgtaataaataagggtgctcagactctccgtattctagccacaggtcacatcgggttt
ctgattaccagcaaggtgctcaaagtggaagacagggacagtttacatgctacgctcaag
atcagaatcacagagggtccgcgccatggcttcctgattcacctggggaaaggcaaccat
agcatcagccagttcacccaagctgatattgatgatatgaagatatgctatgttttacga
gggggtgacaatgccaccagtgacatttttcatttcatggttgaagatggtggaggcaat
aagctgaagaatcaacattttcgcctaaactgggcatggatctccttagaaaaagagtat
tatttagtaaatgaagactccaaatatcttgatgttgttcttaaacggagaggttacctg
ggtgaaacatcttttataagtattagcaccaaagatggtactgccaagaaagataaagac
ttcagaggaaaagcccagaagcaggtgcagtttaatcctggccaaaccttagctacatgg
cgagtacggattttaagtgatggtgaacatgagcagtctgagtcctttcaaattgttctt
tctgagccagtcatggcagttctggaatttcctgatgcatccacggtggaaattattgac
ccaggagatgaatcaactgtctttattcctcagtccacttatactattgaagaagatgtt
ggtgaattatttattccagtcagaagaagtggagatgtgagccaggaactgatggttatc
tgctacacacaacaagggacagcatctggcactgccccaacctctgtactttcttactct
gactacatatccaggcccgaggatcacaacagcattctacgttttgataaagacgaacga
gaaaaaatgtgtcggatagtcatcatagatgattccttatatgaagaggctgagaccttt
gatgttttgctgagcatgccgatgggtggaagaattggtgcagaattcccgagcactcga
attaccattatacctgataaggatgatgaaccagcattctactttggaaatgatgaatac
tatgttgatgagagtgctggctatgttgaagtccgtgtctggaggactggaacagatctg
tctaaagctgcgtctgttacagtgaggtctcgcaagtctgaaccaataactgcagaggct
ggagtagattatgtaggcatcagtcgtaatttggatttttcccctggagtcaatatgcag
acatttcgtgtggtaattctggatgaccttggacagccagtgttagaaggaactgagaag
tttgagcttgtgctaaggatgcccatgaatgctgctcttggagaacccagcaaggccact
atcttcattaatgactcagtctctgacttgcctaagatgcagtttaaagaatctgtatat
gtaggcaatgaaaatgaaggacagatttctgccatgatatacaggagtggggatatccga
tacacatccactgtgagatgctatacaaggcaaggttcagctcaggtaatgatggacttt
gaagaacgtcctaatactgacagttccatcatcacattccttcctggtgaaactgagaag
ccttgcacactggtccttatggatgatactttccatgaagaagaggaagaactacgtctg
gttcttggcactccaagaagtgattcttcctttggtgcctctattggcgaacaaaatgag
accctgataaagattcgggatgatgcagacaaggctattattaagtttggtgagaccaaa
tttagtgtgagtgaaccaaaggacataaggcaagtagcagttgtaaaaatcccagtgctt
cgtctgggagacacttccaaggtttctgtcgtgagagttcatacaaaggacggatctgcg
acttctggagaagactatcaccctatatcagaagaaattgagtttaaggagggtgaaaca
cagcattttgtggaaattgaagttctgtttgatggagtaagggagatgagagaagccttc
actgttcacctgaagcccgatgagaacatggtcgcagaaatacagacagccaaggccatt
gtttacattgaagaaatgaatagcatggcagatgtcacctttccctctgtccctcaagtt
gcatcccttttgatatatgatgatacttctaaagccaaagacagaagcagtcccatagct
ggctatcctgtcatctgtatcacagcttgcaatcctaaatatgaagactttgaaaagact
ggttcaatatgtgccagtgagaacatcaataatactctgacacggtaccggtggctagtg
agtgcacccactggtcctgatggtgtgactagccccatgaaggaggttgactttgatacc
ttcttcacttcctccaagatgattacgcttgactccatttactttcaagcgggttctcgt
gtccagtgtgccgctcgtgccgtgaattcagatgggagtgagggtcttgagcttatgagc
cctattgtaactataagcacatcagaag
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integrated database retrieval system
