Charadrius vociferus (killdeer): 104289479
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Entry
104289479 CDS
T08577
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvf03000
]
104289479 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104289479 (IRF6)
Transcription factors [BR:
cvf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104289479 (IRF6)
Exosome [BR:
cvf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104289479 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
104289479
NCBI-ProteinID:
XP_009886734
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MALHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQHEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVRDIPQSQ
GSIINPGSTGSAPWDEKDNDLDEEEEEELNQSQHVPIQETFPFLNINDSPMAPASAENCS
PEAVWPKNEPVDMEMPPTALQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTTTVSNP
QGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNERQKVFTSRLLDVMDRGLILEV
SGHAIYAVRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQVEKQ
PPYEIYFCFGEEWPDGKPRERKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTP
DIKDNIVAHLKQLYRLLQNHQEGWPMQAPAMHMAQPLPAQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacacccgcgaagagttcgcttgaagccgtggctggtagcccaggtagatagc
ggtatgtatcctggccttatctggctaaaccgagaagcgaagcggtttcagatcccctgg
aagcacgcaactcggcacagcccgcagcacgaggaggagaacaccatcttcaaggcttgg
gctgtggaaacgggaaagtaccaggaaggagtcgatgagccagaccctgcaaagtggaaa
gcccagctccgatgtgctcttaacaaaagccgggaatttaatttgatgtatgatggcacc
aaggaggtgcccatgaatcctattaaaatttatgaagtgcgcgatatcccgcagtcccag
ggatcaatcattaatccaggttccactggctcagctccatgggatgaaaaggataacgat
cttgatgaggaagaagaggaagaattgaatcaatctcagcatgtccctattcaagagaca
tttccgtttcttaatatcaatgattctccaatggctccagccagtgcagaaaactgcagc
cctgaagctgtgtggccaaagaatgaacctgtagatatggaaatgcccccaactgcactg
cagcatgacttcttcagcagccctgagctgtggatcagctctctgccaatgacagaccta
gaaatcaagtttgaatatcgaggaaaggagactggaccgacgacgacagtaagcaacccg
cagggatgcagacttttctacggagagctgggtcctatgccagaccaggaagagctcttt
gggcccattagtttggagcaagtaaagtttccaggaacagagcaaatcaccaatgaaagg
cagaaggtcttcacaagtcggctgctggatgttatggacaggggactgatcctggaggtc
agtggccatgccatctacgctgtccggctctgccagtgcaaggtgtactggtctggtccc
tgtgcgccttcttccaccacaccaaatttgatcgagaggcaaaagaaagtcaaactcttc
tgtctggaaacgttcctaagcgagctgattgcccatcagaaaggacaagttgagaaacag
ccaccatatgagatctacttctgttttggagaagaatggcctgacggaaaacccagggag
aggaagctgattgtggttcaggtcattccagttgtggcccggatgatctatgaaatgttt
tctggtgacttcacacgctccttcgacagcggcagcgtgcgcctccagatctctacgcct
gacatcaaggacaacatcgtggcccacctgaagcagctgtaccgcctgctgcagaaccac
caggaggggtggccgatgcaggcccccgccatgcacatggcccagccgctgcccgcacag
tga
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